RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 MAP4K1Q92918 833 aa12.34□□□□□ -0.43
CAPN3-202ENST00000337571 SPATA33Q96N06 139 aa12.34□□□□□ -0.43
CAPN3-202ENST00000337571 PDCD2LQ9BRP1 358 aa12.34□□□□□ -0.43
CAPN3-202ENST00000337571 ALG1Q9BT22 464 aa12.34□□□□□ -0.43
CAPN3-202ENST00000337571 RIOX1Q9H6W3 641 aa12.34□□□□□ -0.43
CAPN3-202ENST00000337571 MLXIPQ9HAP2 919 aa12.34□□□□□ -0.43
CAPN3-202ENST00000337571 PPP1R11O60927 126 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-202ENST00000337571 CHRM1P11229 460 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-202ENST00000337571 KIF5BP33176 963 aa12.33□□□□□ -0.44
CAPN3-202ENST00000337571 KCNJ6P48051 423 aa12.33□□□□□ -0.44
CAPN3-202ENST00000337571 PSEN2P49810 448 aa12.33□□□□□ -0.44
CAPN3-202ENST00000337571 GHRHRQ02643 423 aa12.33□□□□□ -0.44
CAPN3-202ENST00000337571 MFSD10Q14728 455 aa12.33□□□□□ -0.44
CAPN3-202ENST00000337571 PGM5Q15124 567 aa12.33□□□□□ -0.44
CAPN3-202ENST00000337571 CCDC85BQ15834 202 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-202ENST00000337571 KIAA0753Q2KHM9 967 aa12.33□□□□□ -0.44
CAPN3-202ENST00000337571 GNPTABQ3T906 1256 aa12.33□□□□□ -0.44
CAPN3-202ENST00000337571 CELF3Q5SZQ8 465 aaKnown RBP12.33□□□□□ -0.44
CAPN3-202ENST00000337571 GDF6Q6KF10 455 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-202ENST00000337571 NFXL1Q6ZNB6 911 aa12.33□□□□□ -0.44
CAPN3-202ENST00000337571 TMTC2Q8N394 836 aa12.33□□□□□ -0.44
CAPN3-202ENST00000337571 PIBF1Q8WXW3 757 aa12.33□□□□□ -0.44
CAPN3-202ENST00000337571 CUL5Q93034 780 aa12.33□□□□□ -0.44
CAPN3-202ENST00000337571 SLC9A7Q96T83 725 aa12.33□□□□□ -0.44
CAPN3-202ENST00000337571 YBX2Q9Y2T7 364 aaKnown RBP12.33□□□□□ -0.44
CAPN3-202ENST00000337571 SCN5AQ14524 2016 aa12.33□□□□□ -0.44
CAPN3-202ENST00000337571 TRIP12Q14669 1992 aaPredicted RBP12.32□□□□□ -0.44
CAPN3-202ENST00000337571 OPLAHO14841 1288 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 SORBS3O60504 671 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 BAIAP3O94812 1187 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 GGPS1O95749 300 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 MYOGP15173 224 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 SELPP16109 830 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 MCM5P33992 734 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 TROAPQ12815 778 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 MYSM1Q5VVJ2 828 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 LRRC8DQ7L1W4 858 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 IGDCC4Q8TDY8 1250 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 KAT2BQ92831 832 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 RRP36Q96EU6 259 aaKnown RBP12.32□□□□□ -0.44
CAPN3-202ENST00000337571 MAP3K14Q99558 947 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 LZTS2Q9BRK4 669 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 ZBED2Q9BTP6 218 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 HDAC6Q9UBN7 1215 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 SEC63Q9UGP8 760 aaKnown RBP12.32□□□□□ -0.44
CAPN3-202ENST00000337571 GTF2IRD1Q9UHL9 959 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 PCDHB8Q9UN66 801 aa12.32□□□□□ -0.44
CAPN3-202ENST00000337571 RBM8AQ9Y5S9 174 aaKnown RBP12.32□□□□□ -0.44
CAPN3-202ENST00000337571 CCDC69A6NI79 296 aa12.31□□□□□ -0.44
CAPN3-202ENST00000337571 NOP56O00567 594 aaKnown RBP12.31□□□□□ -0.44
CAPN3-202ENST00000337571 STAM2O75886 525 aa12.31□□□□□ -0.44
CAPN3-202ENST00000337571 ZNF286BP0CG31 522 aa12.31□□□□□ -0.44
CAPN3-202ENST00000337571 GNAQP50148 359 aa12.31□□□□□ -0.44
CAPN3-202ENST00000337571 TJAP1Q5JTD0 557 aa12.31□□□□□ -0.44
CAPN3-202ENST00000337571 USP38Q8NB14 1042 aa12.31□□□□□ -0.44
CAPN3-202ENST00000337571 IL27Q8NEV9 243 aa12.31□□□□□ -0.44
CAPN3-202ENST00000337571 SMARCC2Q8TAQ2 1214 aa12.31□□□□□ -0.44
CAPN3-202ENST00000337571 ATXN2LQ8WWM7 1075 aaKnown RBP12.31□□□□□ -0.44
CAPN3-202ENST00000337571 VWCEQ96DN2 955 aa12.31□□□□□ -0.44
CAPN3-202ENST00000337571 MTA3Q9BTC8 594 aa12.31□□□□□ -0.44
CAPN3-202ENST00000337571 SENP2Q9HC62 589 aa12.31□□□□□ -0.44
CAPN3-202ENST00000337571 VCANP13611 3396 aa12.31□□□□□ -0.44
CAPN3-202ENST00000337571 CHD7Q9P2D1 2997 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 ATMINO43313 823 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-202ENST00000337571 PRC1O43663 620 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 CYTH3O43739 400 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 GTPBP6O43824 516 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-202ENST00000337571 TLL1O43897 1013 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 DDAH1O94760 285 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 F2P00734 622 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 CA3P07451 260 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 CALM1P0DP23 149 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 CALM2P0DP24 149 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 CALM3P0DP25 149 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 CKBP12277 381 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 SMARCA1P28370 1054 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 PTK7Q13308 1070 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 IKBKEQ14164 716 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 ADGRE1Q14246 886 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 NEDD9Q14511 834 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 HSDL1Q3SXM5 330 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 ASTLQ6HA08 431 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-202ENST00000337571 HERC6Q8IVU3 1022 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 MB21D2Q8IYB1 491 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-202ENST00000337571 ZNF654Q8IZM8 581 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 MICALL1Q8N3F8 863 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 ZFP91Q96JP5 570 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-202ENST00000337571 TMEM87BQ96K49 555 aa12.3□□□□□ -0.44
CAPN3-202ENST00000337571 BMP2KQ9NSY1 1161 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-202ENST00000337571 BAZ2BQ9UIF8 2168 aaKnown RBP12.3□□□□□ -0.44
CAPN3-202ENST00000337571 TANC1Q9C0D5 1861 aa12.29□□□□□ -0.44
CAPN3-202ENST00000337571 TRANK1O15050 2925 aa12.29□□□□□ -0.44
CAPN3-202ENST00000337571 H3BRB1 525 aa12.29□□□□□ -0.44
CAPN3-202ENST00000337571 HAS3O00219 553 aa12.29□□□□□ -0.44
CAPN3-202ENST00000337571 EFCAB14O75071 495 aa12.29□□□□□ -0.44
CAPN3-202ENST00000337571 RGS20O76081 388 aa12.29□□□□□ -0.44
CAPN3-202ENST00000337571 MRPS5P82675 430 aaKnown RBP12.29□□□□□ -0.44
CAPN3-202ENST00000337571 SP2Q02086 613 aa12.29□□□□□ -0.44
CAPN3-202ENST00000337571 CNKSR3Q6P9H4 555 aa12.29□□□□□ -0.44
CAPN3-202ENST00000337571 SYNE3Q6ZMZ3 975 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms