RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 TNFAIP2Q03169 654 aa18.25■□□□□ 0.51
LRRC28-202ENST00000331450 MTMR1Q13613 665 aa18.25■□□□□ 0.51
LRRC28-202ENST00000331450 TTLL4Q14679 1199 aa18.25■□□□□ 0.51
LRRC28-202ENST00000331450 KCNV1Q6PIU1 500 aa18.25■□□□□ 0.51
LRRC28-202ENST00000331450 ABHD8Q96I13 439 aa18.25■□□□□ 0.51
LRRC28-202ENST00000331450 DDX41Q9UJV9 622 aaKnown RBP18.25■□□□□ 0.51
LRRC28-202ENST00000331450 MRVI1Q9Y6F6 885 aa18.25■□□□□ 0.51
LRRC28-202ENST00000331450 POTEFA5A3E0 1075 aa18.24■□□□□ 0.51
LRRC28-202ENST00000331450 NKRFO15226 690 aaKnown RBP eCLIP18.24■□□□□ 0.51
LRRC28-202ENST00000331450 MAFGO15525 162 aa18.24■□□□□ 0.51
LRRC28-202ENST00000331450 TXNP10599 105 aaKnown RBP18.24■□□□□ 0.51
LRRC28-202ENST00000331450 PDIA4P13667 645 aaKnown RBP18.24■□□□□ 0.51
LRRC28-202ENST00000331450 GCFC2P16383 781 aaKnown RBP18.24■□□□□ 0.51
LRRC28-202ENST00000331450 UBA1P22314 1058 aaKnown RBP18.24■□□□□ 0.51
LRRC28-202ENST00000331450 PTGS1P23219 599 aa18.24■□□□□ 0.51
LRRC28-202ENST00000331450 NKX3-2P78367 333 aa18.24■□□□□ 0.51
LRRC28-202ENST00000331450 SETQ01105 290 aaPredicted RBP18.24■□□□□ 0.51
LRRC28-202ENST00000331450 SP2Q02086 613 aa18.24■□□□□ 0.51
LRRC28-202ENST00000331450 RESTQ13127 1097 aa18.24■□□□□ 0.51
LRRC28-202ENST00000331450 GNL2Q13823 731 aaKnown RBP18.24■□□□□ 0.51
LRRC28-202ENST00000331450 GJC2Q5T442 439 aaPredicted RBP18.24■□□□□ 0.51
LRRC28-202ENST00000331450 ANO1Q5XXA6 986 aa18.24■□□□□ 0.51
LRRC28-202ENST00000331450 MCTP1Q6DN14 999 aa18.24■□□□□ 0.51
LRRC28-202ENST00000331450 PPP4R3AQ6IN85 833 aa18.24■□□□□ 0.51
LRRC28-202ENST00000331450 TNS4Q8IZW8 715 aa18.24■□□□□ 0.51
LRRC28-202ENST00000331450 CDHR1Q96JP9 859 aa18.24■□□□□ 0.51
LRRC28-202ENST00000331450 DEFB118Q96PH6 123 aa18.24■□□□□ 0.51
LRRC28-202ENST00000331450 CRISPLD2Q9H0B8 497 aa18.24■□□□□ 0.51
LRRC28-202ENST00000331450 UPF3AQ9H1J1 476 aaKnown RBP18.24■□□□□ 0.51
LRRC28-202ENST00000331450 KCNH7Q9NS40 1196 aa18.24■□□□□ 0.51
LRRC28-202ENST00000331450 SYNRGQ9UMZ2 1314 aa18.23■□□□□ 0.51
LRRC28-202ENST00000331450 ADAMTS4O75173 837 aa18.23■□□□□ 0.51
LRRC28-202ENST00000331450 ARP10275 920 aa18.23■□□□□ 0.51
LRRC28-202ENST00000331450 RARBP10826 455 aa18.23■□□□□ 0.51
LRRC28-202ENST00000331450 KCNA2P16389 499 aa18.23■□□□□ 0.51
LRRC28-202ENST00000331450 DDIT3P35638 169 aa18.23■□□□□ 0.51
LRRC28-202ENST00000331450 ZNF76P36508 570 aa18.23■□□□□ 0.51
LRRC28-202ENST00000331450 TRAPPC10P48553 1259 aa18.23■□□□□ 0.51
LRRC28-202ENST00000331450 ARHGAP1Q07960 439 aa18.23■□□□□ 0.51
LRRC28-202ENST00000331450 LY6KQ17RY6 165 aa18.23■□□□□ 0.51
LRRC28-202ENST00000331450 LETM2Q2VYF4 491 aa18.23■□□□□ 0.51
LRRC28-202ENST00000331450 Q4G0T1 1027 aa18.23■□□□□ 0.51
LRRC28-202ENST00000331450 PLA2G4DQ86XP0 818 aa18.23■□□□□ 0.51
LRRC28-202ENST00000331450 COPS5Q92905 334 aa18.23■□□□□ 0.51
LRRC28-202ENST00000331450 NAP1L4Q99733 375 aaKnown RBP18.23■□□□□ 0.51
LRRC28-202ENST00000331450 SENP7Q9BQF6 1050 aa18.23■□□□□ 0.51
LRRC28-202ENST00000331450 Q9Y3F1 56 aa18.23■□□□□ 0.51
LRRC28-202ENST00000331450 CTAGE5O15320 804 aa18.22■□□□□ 0.51
LRRC28-202ENST00000331450 SLC37A4O43826 429 aa18.22■□□□□ 0.51
LRRC28-202ENST00000331450 ATP9AO75110 1047 aa18.22■□□□□ 0.51
LRRC28-202ENST00000331450 GJA8P48165 433 aa18.22■□□□□ 0.51
LRRC28-202ENST00000331450 TOB1P50616 345 aaPredicted RBP18.22■□□□□ 0.51
LRRC28-202ENST00000331450 GJA9P57773 515 aa18.22■□□□□ 0.51
LRRC28-202ENST00000331450 PKP1Q13835 747 aa18.22■□□□□ 0.51
LRRC28-202ENST00000331450 PRR16Q569H4 304 aa18.22■□□□□ 0.51
LRRC28-202ENST00000331450 BRAPQ7Z569 592 aa18.22■□□□□ 0.51
LRRC28-202ENST00000331450 TLK2Q86UE8 772 aa18.22■□□□□ 0.51
LRRC28-202ENST00000331450 FERMT3Q86UX7 667 aa18.22■□□□□ 0.51
LRRC28-202ENST00000331450 U2AF1L4Q8WU68 220 aaKnown RBP18.22■□□□□ 0.51
LRRC28-202ENST00000331450 EMID1Q96A84 441 aaPredicted RBP18.22■□□□□ 0.51
LRRC28-202ENST00000331450 AGO4Q9HCK5 861 aaKnown RBP18.22■□□□□ 0.51
LRRC28-202ENST00000331450 XPNPEP3Q9NQH7 507 aa18.22■□□□□ 0.51
LRRC28-202ENST00000331450 OGDHLQ9ULD0 1010 aa18.22■□□□□ 0.51
LRRC28-202ENST00000331450 CCNT1O60563 726 aaKnown RBP18.21■□□□□ 0.51
LRRC28-202ENST00000331450 SGPL1O95470 568 aa18.21■□□□□ 0.51
LRRC28-202ENST00000331450 GH1P01241 217 aa18.21■□□□□ 0.51
LRRC28-202ENST00000331450 BCAS3Q9H6U6 928 aa18.21■□□□□ 0.51
LRRC28-202ENST00000331450 DDX25Q9UHL0 483 aaKnown RBP18.21■□□□□ 0.51
LRRC28-202ENST00000331450 NOL7Q9UMY1 257 aaKnown RBP18.21■□□□□ 0.51
LRRC28-202ENST00000331450 NFASCO94856 1347 aa18.21■□□□□ 0.51
LRRC28-202ENST00000331450 MSH4O15457 936 aa18.2■□□□□ 0.5
LRRC28-202ENST00000331450 FARP2O94887 1054 aaPredicted RBP18.2■□□□□ 0.5
LRRC28-202ENST00000331450 GGPS1O95749 300 aa18.2■□□□□ 0.5
LRRC28-202ENST00000331450 CST5P28325 142 aaPredicted RBP18.2■□□□□ 0.5
LRRC28-202ENST00000331450 IRX5P78411 483 aaPredicted RBP18.2■□□□□ 0.5
LRRC28-202ENST00000331450 ITGB3BPQ13352 177 aaPredicted RBP18.2■□□□□ 0.5
LRRC28-202ENST00000331450 ORC2Q13416 577 aaPredicted RBP18.2■□□□□ 0.5
LRRC28-202ENST00000331450 RILPL1Q5EBL4 403 aa18.2■□□□□ 0.5
LRRC28-202ENST00000331450 CELF3Q5SZQ8 465 aaKnown RBP18.2■□□□□ 0.5
LRRC28-202ENST00000331450 MYSM1Q5VVJ2 828 aa18.2■□□□□ 0.5
LRRC28-202ENST00000331450 ETNPPLQ8TBG4 499 aa18.2■□□□□ 0.5
LRRC28-202ENST00000331450 TMEM106CQ9BVX2 250 aa18.2■□□□□ 0.5
LRRC28-202ENST00000331450 KCNMB3Q9NPA1 279 aa18.2■□□□□ 0.5
LRRC28-202ENST00000331450 MYADML2A6NDP7 307 aa18.19■□□□□ 0.5
LRRC28-202ENST00000331450 IPO5O00410 1097 aaKnown RBP18.19■□□□□ 0.5
LRRC28-202ENST00000331450 DHX15O43143 795 aaKnown RBP18.19■□□□□ 0.5
LRRC28-202ENST00000331450 PGK1P00558 417 aa18.19■□□□□ 0.5
LRRC28-202ENST00000331450 ZSCAN22P10073 491 aaPredicted RBP18.19■□□□□ 0.5
LRRC28-202ENST00000331450 CAPN2P17655 700 aa18.19■□□□□ 0.5
LRRC28-202ENST00000331450 NEDD9Q14511 834 aa18.19■□□□□ 0.5
LRRC28-202ENST00000331450 TTC38Q5R3I4 469 aa18.19■□□□□ 0.5
LRRC28-202ENST00000331450 POTEDQ86YR6 584 aa18.19■□□□□ 0.5
LRRC28-202ENST00000331450 GIMAP8Q8ND71 665 aaPredicted RBP18.19■□□□□ 0.5
LRRC28-202ENST00000331450 KLHDC9Q8NEP7 349 aa18.19■□□□□ 0.5
LRRC28-202ENST00000331450 OR6J1Q8NGC5 347 aa18.19■□□□□ 0.5
LRRC28-202ENST00000331450 SLC5A5Q92911 643 aa18.19■□□□□ 0.5
LRRC28-202ENST00000331450 ZSCAN16Q9H4T2 348 aaPredicted RBP18.19■□□□□ 0.5
LRRC28-202ENST00000331450 PKD2L1Q9P0L9 805 aa18.19■□□□□ 0.5
LRRC28-202ENST00000331450 A6NJR5 290 aa18.18■□□□□ 0.5
LRRC28-202ENST00000331450 TBX3O15119 743 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms