RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 FGFR1OPO95684 399 aaKnown RBP15.91■□□□□ 0.14
SNX20-202ENST00000330943 SMTNP53814 917 aa15.91■□□□□ 0.14
SNX20-202ENST00000330943 MECOMQ03112 1051 aa15.91■□□□□ 0.14
SNX20-202ENST00000330943 NSUN4Q96CB9 384 aaKnown RBP15.91■□□□□ 0.14
SNX20-202ENST00000330943 INPP4AQ96PE3 977 aaPredicted RBP15.91■□□□□ 0.14
SNX20-202ENST00000330943 IL17RBQ9NRM6 502 aa15.91■□□□□ 0.14
SNX20-202ENST00000330943 COL4A1P02462 1669 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 GRID2IPA4D2P6 1211 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 MYMKA6NI61 221 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 CLSTN1O94985 981 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 TNNC1P63316 161 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 ARID5AQ03989 594 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 DDB1Q16531 1140 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 CCDC121Q6ZUS5 278 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 TMBIM4Q9HC24 238 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 SLC40A1Q9NP59 571 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 ARPP21Q9UBL0 812 aaPredicted RBP15.9■□□□□ 0.14
SNX20-202ENST00000330943 GCOM1H8Y6P7 765 aaPredicted RBP15.9■□□□□ 0.14
SNX20-202ENST00000330943 TLR2O60603 784 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 MYZAPP0CAP1 466 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 IBSPP21815 317 aaPredicted RBP15.9■□□□□ 0.14
SNX20-202ENST00000330943 HSPA9P38646 679 aaKnown RBP15.9■□□□□ 0.14
SNX20-202ENST00000330943 KCNMA1Q12791 1236 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 GRM4Q14833 912 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 LRRC41Q15345 812 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 NAB2Q15742 525 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 FAM98CQ17RN3 349 aaKnown RBP15.9■□□□□ 0.14
SNX20-202ENST00000330943 MEI1Q5TIA1 1274 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 SFMBT2Q5VUG0 894 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 GALNT17Q6IS24 598 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 TMED8Q6PL24 325 aaPredicted RBP15.9■□□□□ 0.14
SNX20-202ENST00000330943 CCDC114Q96M63 670 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.9■□□□□ 0.14
SNX20-202ENST00000330943 CPVLQ9H3G5 476 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 TAF1DQ9H5J8 278 aaPredicted RBP15.9■□□□□ 0.14
SNX20-202ENST00000330943 LUC7LQ9NQ29 371 aaKnown RBP15.9■□□□□ 0.14
SNX20-202ENST00000330943 MCM9Q9NXL9 1143 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 JAG2Q9Y219 1238 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 ITGB4P16144 1822 aa15.9■□□□□ 0.14
SNX20-202ENST00000330943 RBAK-RBAKDNI3L0D1 243 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 CDR1P51861 262 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 NAPAP54920 295 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 NONOQ15233 471 aaKnown RBP eCLIP15.89■□□□□ 0.13
SNX20-202ENST00000330943 PPP4R3AQ6IN85 833 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 LRRC55Q6ZSA7 311 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 ARFGAP2Q8N6H7 521 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 GLIS3Q8NEA6 775 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 TBC1D5Q92609 795 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 ATP8A2Q9NTI2 1148 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 BCCIPQ9P287 314 aaKnown RBP eCLIP15.89■□□□□ 0.13
SNX20-202ENST00000330943 ABCB11O95342 1321 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 RASSF9O75901 435 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 SERPING1P05155 500 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 USP17L8P0C7I0 530 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 GOLGA8HP0CJ92 632 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 HSD17B3P37058 310 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 TXKP42681 527 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 GNAQP50148 359 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 POLR2FP61218 127 aaKnown RBP15.89■□□□□ 0.13
SNX20-202ENST00000330943 ERVK-9P63128 1117 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 PLCB4Q15147 1175 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 KIAA0753Q2KHM9 967 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 C6orf89Q6UWU4 347 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 UNC13DQ70J99 1090 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 GUF1Q8N442 669 aaKnown RBP15.89■□□□□ 0.13
SNX20-202ENST00000330943 USP38Q8NB14 1042 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 C1orf131Q8NDD1 294 aaKnown RBP15.89■□□□□ 0.13
SNX20-202ENST00000330943 GIMAP7Q8NHV1 300 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 PACSIN1Q9BY11 444 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 PLCB1Q9NQ66 1216 aa15.89■□□□□ 0.13
SNX20-202ENST00000330943 LRRC63Q05C16 580 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 ITPK1Q13572 414 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 FAM83BQ5T0W9 1011 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 MARCH10Q8NA82 808 aaPredicted RBP15.88■□□□□ 0.13
SNX20-202ENST00000330943 GGA2Q9UJY4 613 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 NIP7Q9Y221 180 aaKnown RBP eCLIP15.88■□□□□ 0.13
SNX20-202ENST00000330943 LAMB1P07942 1786 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 GOLGA6L7A0A1B0GV03 622 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 USP17L3A6NCW0 530 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 USP17L4A6NCW7 530 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 SSBP05455 408 aaKnown RBP eCLIP15.88■□□□□ 0.13
SNX20-202ENST00000330943 GRB10Q13322 594 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 KCTD19Q17RG1 926 aaPredicted RBP15.88■□□□□ 0.13
SNX20-202ENST00000330943 USP17L1Q7RTZ2 530 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 TAF4BQ92750 862 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 CDK5RAP3Q96JB5 506 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 FAM84BQ96KN1 310 aaPredicted RBP15.88■□□□□ 0.13
SNX20-202ENST00000330943 LSM14BQ9BX40 385 aaKnown RBP15.88■□□□□ 0.13
SNX20-202ENST00000330943 EDEM3Q9BZQ6 932 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 BLOC1S4Q9NUP1 217 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 CEP72Q9P209 647 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 PCDHGC5Q9Y5F6 944 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 GMNCA6NCL1 334 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 KCNK3O14649 394 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 BACH1O14867 736 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 TMOD1P28289 359 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 CTNNA1P35221 906 aaKnown RBP15.88■□□□□ 0.13
SNX20-202ENST00000330943 CRKLP46109 303 aaKnown RBP15.88■□□□□ 0.13
SNX20-202ENST00000330943 RAPGEF1Q13905 1077 aa15.88■□□□□ 0.13
SNX20-202ENST00000330943 ODF2Q5BJF6 829 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms