RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 BBXQ8WY36 941 aaPredicted RBP14.36□□□□□ -0.11
DDX39A-202ENST00000324340 RMDN3Q96TC7 470 aa14.36□□□□□ -0.11
DDX39A-202ENST00000324340 PARK7Q99497 189 aaKnown RBP14.36□□□□□ -0.11
DDX39A-202ENST00000324340 PDCD2LQ9BRP1 358 aa14.36□□□□□ -0.11
DDX39A-202ENST00000324340 PYM1Q9BRP8 204 aaKnown RBP14.36□□□□□ -0.11
DDX39A-202ENST00000324340 TNMDQ9H2S6 317 aa14.36□□□□□ -0.11
DDX39A-202ENST00000324340 MROH8Q9H579 483 aa14.36□□□□□ -0.11
DDX39A-202ENST00000324340 A0A087X0B3 334 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 SYCE3A1L190 88 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 CCDC66A2RUB6 948 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 MSH4O15457 936 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 ERCC3P19447 782 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 ZNF76P36508 570 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 TECP42680 631 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 SETQ01105 290 aaPredicted RBP14.35□□□□□ -0.11
DDX39A-202ENST00000324340 TMEM266Q2M3C6 531 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 KRBA2Q6ZNG9 492 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 GPRC5AQ8NFJ5 357 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 DNERQ8NFT8 737 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 IL31RAQ8NI17 732 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 CYP2W1Q8TAV3 490 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 NSUN6Q8TEA1 469 aaKnown RBP14.35□□□□□ -0.11
DDX39A-202ENST00000324340 SMCR8Q8TEV9 937 aaPredicted RBP14.35□□□□□ -0.11
DDX39A-202ENST00000324340 MXRA8Q9BRK3 442 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 RAB34Q9BZG1 259 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 TTC12Q9H892 705 aaPredicted RBP14.35□□□□□ -0.11
DDX39A-202ENST00000324340 USP25Q9UHP3 1055 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 PCDHA12Q9UN75 941 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 UBIAD1Q9Y5Z9 338 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 ADGRA2Q96PE1 1338 aa14.35□□□□□ -0.11
DDX39A-202ENST00000324340 ITGB5P18084 799 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 TXLNAP40222 546 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 UBXN2AP68543 259 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 MRPS9P82933 396 aaKnown RBP14.34□□□□□ -0.11
DDX39A-202ENST00000324340 E2F4Q16254 413 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 CAMK4Q16566 473 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 ARHGEF16Q5VV41 709 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 NCAPG2Q86XI2 1143 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 ANKRD35Q8N283 1001 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 PURBQ96QR8 312 aaKnown RBP14.34□□□□□ -0.11
DDX39A-202ENST00000324340 TSPYL1Q9H0U9 437 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 PRDM10Q9NQV6 1147 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 IGF2BP3O00425 579 aaKnown RBP eCLIP14.34□□□□□ -0.11
DDX39A-202ENST00000324340 POLR2DO15514 142 aaKnown RBP14.34□□□□□ -0.11
DDX39A-202ENST00000324340 SLC26A4O43511 780 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 ACTN4O43707 911 aaKnown RBP14.34□□□□□ -0.11
DDX39A-202ENST00000324340 STAM2O75886 525 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 EIF2AK2P19525 551 aaKnown RBP14.34□□□□□ -0.11
DDX39A-202ENST00000324340 UBA7P41226 1012 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 CCNA1P78396 465 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 SPIRE1Q08AE8 756 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 LONRF3Q496Y0 759 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 VSIG10LQ86VR7 867 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 PLA2G4DQ86XP0 818 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 FAM133AQ8N9E0 248 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 SLC5A5Q92911 643 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 IWS1Q96ST2 819 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 FUCA2Q9BTY2 467 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 MMTAG2Q9BU76 263 aaKnown RBP14.34□□□□□ -0.11
DDX39A-202ENST00000324340 JADE2Q9NQC1 790 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 LRWD1Q9UFC0 647 aa14.34□□□□□ -0.11
DDX39A-202ENST00000324340 ABT1Q9ULW3 272 aaKnown RBP14.34□□□□□ -0.11
DDX39A-202ENST00000324340 DNAJC25-GNG10A0A024R161 153 aa14.33□□□□□ -0.12
DDX39A-202ENST00000324340 PP2D1A8MPX8 630 aa14.33□□□□□ -0.12
DDX39A-202ENST00000324340 MARCH6O60337 910 aa14.33□□□□□ -0.12
DDX39A-202ENST00000324340 NR3C2P08235 984 aa14.33□□□□□ -0.12
DDX39A-202ENST00000324340 SLFN14P0C7P3 912 aa14.33□□□□□ -0.12
DDX39A-202ENST00000324340 CCND2P30279 289 aa14.33□□□□□ -0.12
DDX39A-202ENST00000324340 CDC25AP30304 524 aa14.33□□□□□ -0.12
DDX39A-202ENST00000324340 MDM2Q00987 491 aaPredicted RBP14.33□□□□□ -0.12
DDX39A-202ENST00000324340 FAM110CQ1W6H9 321 aa14.33□□□□□ -0.12
DDX39A-202ENST00000324340 KANK3Q6NY19 840 aa14.33□□□□□ -0.12
DDX39A-202ENST00000324340 CABP7Q86V35 215 aa14.33□□□□□ -0.12
DDX39A-202ENST00000324340 IFNL1Q8IU54 200 aa14.33□□□□□ -0.12
DDX39A-202ENST00000324340 ANKRD13CQ8N6S4 541 aa14.33□□□□□ -0.12
DDX39A-202ENST00000324340 IQUBQ8NA54 791 aa14.33□□□□□ -0.12
DDX39A-202ENST00000324340 SDF4Q9BRK5 362 aa14.33□□□□□ -0.12
DDX39A-202ENST00000324340 R3HDMLQ9H3Y0 253 aa14.33□□□□□ -0.12
DDX39A-202ENST00000324340 DISC1Q9NRI5 854 aa14.33□□□□□ -0.12
DDX39A-202ENST00000324340 VAV3Q9UKW4 847 aa14.33□□□□□ -0.12
DDX39A-202ENST00000324340 LRRC37A2A6NM11 1700 aa14.32□□□□□ -0.12
DDX39A-202ENST00000324340 ASTN1O14525 1302 aa14.32□□□□□ -0.12
DDX39A-202ENST00000324340 LOC102724159A0A0B4J2E5 919 aa14.32□□□□□ -0.12
DDX39A-202ENST00000324340 POTEMA6NI47 508 aa14.32□□□□□ -0.12
DDX39A-202ENST00000324340 GOLGA6L6A8MZA4 724 aa14.32□□□□□ -0.12
DDX39A-202ENST00000324340 MAFGO15525 162 aa14.32□□□□□ -0.12
DDX39A-202ENST00000324340 PSMD10O75832 226 aa14.32□□□□□ -0.12
DDX39A-202ENST00000324340 ARP10275 920 aa14.32□□□□□ -0.12
DDX39A-202ENST00000324340 EDNRBP24530 442 aa14.32□□□□□ -0.12
DDX39A-202ENST00000324340 TM4SF4P48230 202 aa14.32□□□□□ -0.12
DDX39A-202ENST00000324340 CBX1P83916 185 aa14.32□□□□□ -0.12
DDX39A-202ENST00000324340 SREBF2Q12772 1141 aa14.32□□□□□ -0.12
DDX39A-202ENST00000324340 KARSQ15046 597 aaKnown RBP14.32□□□□□ -0.12
DDX39A-202ENST00000324340 PWP2Q15269 919 aaKnown RBP14.32□□□□□ -0.12
DDX39A-202ENST00000324340 HYIQ5T013 277 aa14.32□□□□□ -0.12
DDX39A-202ENST00000324340 PDXDC2PQ6P474 469 aa14.32□□□□□ -0.12
DDX39A-202ENST00000324340 SH3RF1Q7Z6J0 888 aa14.32□□□□□ -0.12
DDX39A-202ENST00000324340 PDILTQ8N807 584 aa14.32□□□□□ -0.12
DDX39A-202ENST00000324340 CNNM3Q8NE01 707 aa14.32□□□□□ -0.12
DDX39A-202ENST00000324340 GJA10Q969M2 543 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 1102.6 ms