RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 APPP05067 770 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 FSTP19883 344 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 RPL11P62913 178 aaKnown RBP5.35□□□□□ -1.55
SMCO3-201ENST00000316048 IFI16Q16666 785 aaKnown RBP5.35□□□□□ -1.55
SMCO3-201ENST00000316048 PTPN21Q16825 1174 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 CEP68Q76N32 757 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 C16orf59Q7L2K0 433 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 CCDC146Q8IYE0 955 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 NETO1Q8TDF5 533 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 G6PC3Q9BUM1 346 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 ZNF281Q9Y2X9 895 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 RWDD3Q9Y3V2 267 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 PRDM2Q13029 1718 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 TNIKQ9UKE5 1360 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 TRBV23OR9-2A0A075B6M9 112 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 WTIPA6NIX2 430 aaPredicted RBP5.35□□□□□ -1.55
SMCO3-201ENST00000316048 DVL2O14641 736 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 MYO1BO43795 1136 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 TBC1D8O95759 1140 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 MYBL2P10244 700 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 GRIK1P39086 918 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 KPNA1P52294 538 aaPredicted RBP5.35□□□□□ -1.55
SMCO3-201ENST00000316048 KIR3DS1Q14943 382 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 PTRH1Q86Y79 214 aaKnown RBP5.35□□□□□ -1.55
SMCO3-201ENST00000316048 HHIPL1Q96JK4 782 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 FCRL2Q96LA5 508 aaPredicted RBP5.35□□□□□ -1.55
SMCO3-201ENST00000316048 C8orf48Q96LL4 319 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 JMJD8Q96S16 334 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 POLR3GLQ9BT43 218 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 CDH19Q9H159 772 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 FZD9O00144 591 aa5.34□□□□□ -1.55
SMCO3-201ENST00000316048 USP2O75604 605 aaPredicted RBP5.34□□□□□ -1.55
SMCO3-201ENST00000316048 ZBTB48P10074 688 aaPredicted RBP5.34□□□□□ -1.55
SMCO3-201ENST00000316048 SLC9A1P19634 815 aa5.34□□□□□ -1.55
SMCO3-201ENST00000316048 GSK3AP49840 483 aa5.34□□□□□ -1.55
SMCO3-201ENST00000316048 DOC2BQ14184 412 aa5.34□□□□□ -1.55
SMCO3-201ENST00000316048 DDB1Q16531 1140 aa5.34□□□□□ -1.55
SMCO3-201ENST00000316048 BROXQ5VW32 411 aa5.34□□□□□ -1.55
SMCO3-201ENST00000316048 CPZQ66K79 652 aa5.34□□□□□ -1.55
SMCO3-201ENST00000316048 CYP2R1Q6VVX0 501 aa5.34□□□□□ -1.55
SMCO3-201ENST00000316048 TMPRSS7Q7RTY8 843 aa5.34□□□□□ -1.55
SMCO3-201ENST00000316048 ZDHHC13Q8IUH4 622 aa5.34□□□□□ -1.55
SMCO3-201ENST00000316048 SH3RF2Q8TEC5 729 aa5.34□□□□□ -1.55
SMCO3-201ENST00000316048 CHMP4CQ96CF2 233 aa5.34□□□□□ -1.55
SMCO3-201ENST00000316048 TMEM169Q96HH4 297 aa5.34□□□□□ -1.55
SMCO3-201ENST00000316048 RHOBTB2Q9BYZ6 727 aa5.34□□□□□ -1.55
SMCO3-201ENST00000316048 C14orf119Q9NWQ9 140 aa5.34□□□□□ -1.55
SMCO3-201ENST00000316048 GOLGA3Q08378 1498 aa5.34□□□□□ -1.56
SMCO3-201ENST00000316048 PRR19A6NJB7 356 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 PEX14O75381 377 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 FBXO21O94952 628 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 CRY1Q16526 586 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 OTOP1Q7RTM1 612 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 SLC5A5Q92911 643 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 CEP164Q9UPV0 1460 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 PRC1O43663 620 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 NPHS1O60500 1241 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 EFEMP2O95967 443 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 FUCA1P04066 466 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 GNAT1P11488 350 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 TACR1P25103 407 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 IRF9Q00978 393 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 PCBP2Q15366 365 aaKnown RBP eCLIP5.33□□□□□ -1.56
SMCO3-201ENST00000316048 SEC23AQ15436 765 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 AOC3Q16853 763 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 INAVAQ3KP66 663 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 PLA2G4EQ3MJ16 856 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 RBM12BQ8IXT5 1001 aaKnown RBP5.33□□□□□ -1.56
SMCO3-201ENST00000316048 CHPFQ8IZ52 775 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 MYO1HQ8N1T3 1032 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 PIP4K2CQ8TBX8 421 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 AHCYL2Q96HN2 611 aaKnown RBP5.33□□□□□ -1.56
SMCO3-201ENST00000316048 CD244Q9BZW8 370 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 IP6K2Q9UHH9 426 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 ZNF180Q9UJW8 692 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 LUC7L2Q9Y383 392 aaKnown RBP5.33□□□□□ -1.56
SMCO3-201ENST00000316048 CUX1P39880 1505 aa5.33□□□□□ -1.56
SMCO3-201ENST00000316048 TMEM265A0A087WTH1 108 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 FADS2P1A8MWK0 482 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 C22orf46C9J442 243 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 ABLIM3O94929 683 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 MSL3P1P0C860 447 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 PTX3P26022 381 aaPredicted RBP5.32□□□□□ -1.56
SMCO3-201ENST00000316048 LACTBP83111 547 aaPredicted RBP5.32□□□□□ -1.56
SMCO3-201ENST00000316048 BNIP3Q12983 259 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 RALGPS1Q5JS13 557 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 ARHGAP36Q6ZRI8 547 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 NOSTRINQ8IVI9 506 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 Q8N1Y9 231 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 PLEKHO2Q8TD55 490 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 TRMT2BQ96GJ1 504 aaKnown RBP5.32□□□□□ -1.56
SMCO3-201ENST00000316048 MAP6Q96JE9 813 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 ELF4Q99607 663 aaPredicted RBP5.32□□□□□ -1.56
SMCO3-201ENST00000316048 CARS2Q9HA77 564 aaKnown RBP5.32□□□□□ -1.56
SMCO3-201ENST00000316048 PIM2Q9P1W9 311 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 MAN2B1O00754 1011 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 H2AFYO75367 372 aaKnown RBP5.32□□□□□ -1.56
SMCO3-201ENST00000316048 TGFB1P01137 390 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 ATF3P18847 181 aa5.32□□□□□ -1.56
SMCO3-201ENST00000316048 GNALP38405 381 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms