RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 MYL5Q02045 173 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 VSTM4Q8IW00 320 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 RASGRP4Q8TDF6 673 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 RBM41Q96IZ5 413 aaKnown RBP10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 FAM81BQ96LP2 452 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 MXD3Q9BW11 206 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 PCDHGC5Q9Y5F6 944 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 SLURP2P0DP57 97 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 NAT2P11245 290 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 CDK8P49336 464 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 GNG11P61952 73 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 CASP8Q14790 479 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 TTC38Q5R3I4 469 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 SDR16C5Q8N3Y7 309 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 NSMCE1Q8WV22 266 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 FAM167BQ9BTA0 163 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 TMEM60Q9H2L4 133 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 SH3GLB2Q9NR46 395 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 DAGLAQ9Y4D2 1042 aa10.52□□□□□ -0.73
RBFOX1-201ENST00000311745 TSPY2A6NKD2 308 aa10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 MYO1BO43795 1136 aa10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 EIF4BP23588 611 aaKnown RBP10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 SLC8A3P57103 927 aa10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 SAFBQ15424 915 aaKnown RBP eCLIP10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 PIK3AP1Q6ZUJ8 805 aa10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 SPAG5Q96R06 1193 aa10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 SLC40A1Q9NP59 571 aa10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 MYO1AQ9UBC5 1043 aa10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 FRMD4BQ9Y2L6 1034 aa10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 RNF8O76064 485 aa10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 USP5P45974 858 aa10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 Q4G0T1 1027 aa10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 CDKAL1Q5VV42 579 aa10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 COL23A1Q86Y22 540 aaPredicted RBP10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 TRMT44Q8IYL2 757 aaKnown RBP10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 MKL1Q969V6 931 aa10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 QTRT2Q9H974 415 aaKnown RBP10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 ATP6V0A4Q9HBG4 840 aa10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 SAMSN1Q9NSI8 373 aaKnown RBP10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 BAIAP2L1Q9UHR4 511 aa10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 GGA1Q9UJY5 639 aa10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 COL4A5P29400 1685 aa10.51□□□□□ -0.73
RBFOX1-201ENST00000311745 BBOX1O75936 387 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 SRGNP10124 158 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 SFPQP23246 707 aaKnown RBP eCLIP10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 TXLNAP40222 546 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 FNTAP49354 379 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 BRD3Q15059 726 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 MFN1Q8IWA4 741 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 AMOTL1Q8IY63 956 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 PDILTQ8N807 584 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 ENOX1Q8TC92 643 aaKnown RBP10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 OSBPL9Q96SU4 736 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 TRIM7Q9C029 511 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 GBP3Q9H0R5 595 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 PCDHA4Q9UN74 947 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 KCNJ6P48051 423 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 GNGT1P63211 74 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 TXNRD1Q16881 649 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 MIS18BP1Q6P0N0 1132 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 BZW1Q7L1Q6 419 aaKnown RBP10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 SP8Q8IXZ3 490 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 IGSF22Q8N9C0 903 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 NEDD1Q8NHV4 660 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 CTNNBL1Q8WYA6 563 aaPredicted RBP10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 RABGGTAQ92696 567 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 FERMT2Q96AC1 680 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 KCNQ5Q9NR82 932 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 BARHL2Q9NY43 387 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 HOOK1Q9UJC3 728 aaKnown RBP10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 ITM2BQ9Y287 266 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 GOLGA8HP0CJ92 632 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 SNHG28P0DPA3 235 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 IRAK1P51617 712 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 CUL3Q13618 768 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 NR1I3Q14994 352 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 BEND6Q5SZJ8 279 aaPredicted RBP10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 ARHGAP27Q6ZUM4 889 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 TTC30AQ86WT1 665 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 TRIM58Q8NG06 486 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 WHAMMQ8TF30 809 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 TAF4BQ92750 862 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 RPGRQ92834 1020 aaKnown RBP10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 DHX58Q96C10 678 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 ALS2CR12Q96Q35 445 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 TRPC6Q9Y210 931 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 ATP6V0A2Q9Y487 856 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 PCDHAC2Q9Y5I4 1007 aa10.5□□□□□ -0.73
RBFOX1-201ENST00000311745 AHCYL1O43865 530 aa10.49□□□□□ -0.73
RBFOX1-201ENST00000311745 FUT4P22083 530 aa10.49□□□□□ -0.73
RBFOX1-201ENST00000311745 TRAPPC10P48553 1259 aa10.49□□□□□ -0.73
RBFOX1-201ENST00000311745 NT5C2P49902 561 aa10.49□□□□□ -0.73
RBFOX1-201ENST00000311745 GSTO1P78417 241 aa10.49□□□□□ -0.73
RBFOX1-201ENST00000311745 PPARDQ03181 441 aa10.49□□□□□ -0.73
RBFOX1-201ENST00000311745 SF3B2Q13435 895 aaKnown RBP10.49□□□□□ -0.73
RBFOX1-201ENST00000311745 TLDC1Q6P9B6 456 aa10.49□□□□□ -0.73
RBFOX1-201ENST00000311745 APBB1IPQ7Z5R6 666 aaPredicted RBP10.49□□□□□ -0.73
RBFOX1-201ENST00000311745 C14orf80Q86SX3 495 aa10.49□□□□□ -0.73
RBFOX1-201ENST00000311745 SMYD4Q8IYR2 804 aaPredicted RBP10.49□□□□□ -0.73
RBFOX1-201ENST00000311745 BLIDQ8IZY5 108 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms