RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 FAM155AB1AL88 458 aaPredicted RBP13.32□□□□□ -0.28
TRIM40-205ENST00000307859 C19orf81C9J6K1 198 aa13.32□□□□□ -0.28
TRIM40-205ENST00000307859 FLOT1O75955 427 aa13.32□□□□□ -0.28
TRIM40-205ENST00000307859 PTGS1P23219 599 aa13.32□□□□□ -0.28
TRIM40-205ENST00000307859 HUNKP57058 714 aa13.32□□□□□ -0.28
TRIM40-205ENST00000307859 KMT5BQ4FZB7 885 aa13.32□□□□□ -0.28
TRIM40-205ENST00000307859 SPATA1Q5VX52 437 aa13.32□□□□□ -0.28
TRIM40-205ENST00000307859 RGMBQ6NW40 437 aa13.32□□□□□ -0.28
TRIM40-205ENST00000307859 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
TRIM40-205ENST00000307859 SMYD4Q8IYR2 804 aaPredicted RBP13.32□□□□□ -0.28
TRIM40-205ENST00000307859 SAMD3Q8N6K7 520 aa13.32□□□□□ -0.28
TRIM40-205ENST00000307859 LARP4BQ92615 738 aaKnown RBP13.32□□□□□ -0.28
TRIM40-205ENST00000307859 RAD54LQ92698 747 aa13.32□□□□□ -0.28
TRIM40-205ENST00000307859 GJA10Q969M2 543 aa13.32□□□□□ -0.28
TRIM40-205ENST00000307859 KCNF1Q9H3M0 494 aa13.32□□□□□ -0.28
TRIM40-205ENST00000307859 NRBP1Q9UHY1 535 aa13.32□□□□□ -0.28
TRIM40-205ENST00000307859 FZD1Q9UP38 647 aa13.32□□□□□ -0.28
TRIM40-205ENST00000307859 RPTORQ8N122 1335 aa13.32□□□□□ -0.28
TRIM40-205ENST00000307859 CBFA2T2O43439 604 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 USP2O75604 605 aaPredicted RBP13.31□□□□□ -0.28
TRIM40-205ENST00000307859 CCDC144BQ3MJ40 725 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 SAMD1Q6SPF0 538 aaPredicted RBP13.31□□□□□ -0.28
TRIM40-205ENST00000307859 SV2BQ7L1I2 683 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 CCDC186Q7Z3E2 898 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 GTPBP4Q9BZE4 634 aaKnown RBP13.31□□□□□ -0.28
TRIM40-205ENST00000307859 NT5C3AQ9H0P0 336 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 MAP3K20Q9NYL2 800 aaKnown RBP13.31□□□□□ -0.28
TRIM40-205ENST00000307859 RWDD2AQ9UIY3 292 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 GDAQ9Y2T3 454 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 RABGAP1Q9Y3P9 1069 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 MSH4O15457 936 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 TRPA1O75762 1119 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 FXR1P51114 621 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRIM40-205ENST00000307859 ECM1Q16610 540 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 CDKAL1Q5VV42 579 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 KLHL10Q6JEL2 608 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 KCNK18Q7Z418 384 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 MCF2L2Q86YR7 1114 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 GIMAP8Q8ND71 665 aaPredicted RBP13.31□□□□□ -0.28
TRIM40-205ENST00000307859 CCDC47Q96A33 483 aaKnown RBP13.31□□□□□ -0.28
TRIM40-205ENST00000307859 DCPSQ96C86 337 aaKnown RBP13.31□□□□□ -0.28
TRIM40-205ENST00000307859 ZNF830Q96NB3 372 aaPredicted RBP13.31□□□□□ -0.28
TRIM40-205ENST00000307859 ZNF408Q9H9D4 720 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 IMPACTQ9P2X3 320 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 VAV3Q9UKW4 847 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 ADAMTS5Q9UNA0 930 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 CTNND2Q9UQB3 1225 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 AFG3L2Q9Y4W6 797 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 STK24Q9Y6E0 443 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 ZHX2Q9Y6X8 837 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 MYH11P35749 1972 aa13.31□□□□□ -0.28
TRIM40-205ENST00000307859 FRMPD4Q14CM0 1322 aa13.3□□□□□ -0.28
TRIM40-205ENST00000307859 VWA5AO00534 786 aa13.3□□□□□ -0.28
TRIM40-205ENST00000307859 NFIBO00712 420 aa13.3□□□□□ -0.28
TRIM40-205ENST00000307859 ZBED4O75132 1171 aa13.3□□□□□ -0.28
TRIM40-205ENST00000307859 SERPINC1P01008 464 aa13.3□□□□□ -0.28
TRIM40-205ENST00000307859 ZNF76P36508 570 aa13.3□□□□□ -0.28
TRIM40-205ENST00000307859 CCT6AP40227 531 aaKnown RBP13.3□□□□□ -0.28
TRIM40-205ENST00000307859 PRCPP42785 496 aa13.3□□□□□ -0.28
TRIM40-205ENST00000307859 UBASH3AP57075 661 aa13.3□□□□□ -0.28
TRIM40-205ENST00000307859 ASIC1P78348 528 aa13.3□□□□□ -0.28
TRIM40-205ENST00000307859 PAK1Q13153 545 aa13.3□□□□□ -0.28
TRIM40-205ENST00000307859 MCM6Q14566 821 aa13.3□□□□□ -0.28
TRIM40-205ENST00000307859 COBLL1Q53SF7 1204 aa13.3□□□□□ -0.28
TRIM40-205ENST00000307859 HAUS3Q68CZ6 603 aa13.3□□□□□ -0.28
TRIM40-205ENST00000307859 ADSSL1Q8N142 457 aa13.3□□□□□ -0.28
TRIM40-205ENST00000307859 CYP2W1Q8TAV3 490 aa13.3□□□□□ -0.28
TRIM40-205ENST00000307859 LRRC27Q9C0I9 530 aa13.3□□□□□ -0.28
TRIM40-205ENST00000307859 RAVER2Q9HCJ3 691 aaKnown RBP13.3□□□□□ -0.28
TRIM40-205ENST00000307859 SAMSN1Q9NSI8 373 aaKnown RBP13.3□□□□□ -0.28
TRIM40-205ENST00000307859 SNCAIPQ9Y6H5 919 aa13.3□□□□□ -0.28
TRIM40-205ENST00000307859 PVALEFA0A1B0GWK0 134 aa13.29□□□□□ -0.28
TRIM40-205ENST00000307859 MYMKA6NI61 221 aa13.29□□□□□ -0.28
TRIM40-205ENST00000307859 ALAS1P13196 640 aa13.29□□□□□ -0.28
TRIM40-205ENST00000307859 OAZ1P54368 228 aa13.29□□□□□ -0.28
TRIM40-205ENST00000307859 HMGCS2P54868 508 aa13.29□□□□□ -0.28
TRIM40-205ENST00000307859 SETQ01105 290 aaPredicted RBP13.29□□□□□ -0.28
TRIM40-205ENST00000307859 SH3D19Q5HYK7 790 aa13.29□□□□□ -0.28
TRIM40-205ENST00000307859 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.29□□□□□ -0.28
TRIM40-205ENST00000307859 SULF1Q8IWU6 871 aa13.29□□□□□ -0.28
TRIM40-205ENST00000307859 CPXCR1Q8N123 301 aa13.29□□□□□ -0.28
TRIM40-205ENST00000307859 REPS2Q8NFH8 660 aa13.29□□□□□ -0.28
TRIM40-205ENST00000307859 NELFBQ8WX92 580 aa13.29□□□□□ -0.28
TRIM40-205ENST00000307859 ATG4CQ96DT6 458 aa13.29□□□□□ -0.28
TRIM40-205ENST00000307859 RTN4Q9NQC3 1192 aaKnown RBP13.29□□□□□ -0.28
TRIM40-205ENST00000307859 EXOC1Q9NV70 894 aa13.29□□□□□ -0.28
TRIM40-205ENST00000307859 COL20A1Q9P218 1284 aa13.29□□□□□ -0.28
TRIM40-205ENST00000307859 ADM5C9JUS6 153 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 RPA1P27694 616 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 HOXA7P31268 230 aaPredicted RBP13.28□□□□□ -0.28
TRIM40-205ENST00000307859 DSG3P32926 999 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 STAT3P40763 770 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 PPP1R2P41236 205 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 STX17P56962 302 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 GSDMDP57764 484 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 MAP3K9P80192 1104 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 PDE4DQ08499 809 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 VGLL4Q14135 290 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 CEP55Q53EZ4 464 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 MUM1L1Q5H9M0 696 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms