RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 UBA1P22314 1058 aaKnown RBP23.74■■□□□ 1.39
RER1-201ENST00000306256 SP2Q02086 613 aa23.74■■□□□ 1.39
RER1-201ENST00000306256 TRAF1Q13077 416 aa23.74■■□□□ 1.39
RER1-201ENST00000306256 GPNMBQ14956 572 aa23.74■■□□□ 1.39
RER1-201ENST00000306256 CELF3Q5SZQ8 465 aaKnown RBP23.74■■□□□ 1.39
RER1-201ENST00000306256 MYSM1Q5VVJ2 828 aa23.74■■□□□ 1.39
RER1-201ENST00000306256 SPATA33Q96N06 139 aa23.74■■□□□ 1.39
RER1-201ENST00000306256 SLC9A7Q96T83 725 aa23.74■■□□□ 1.39
RER1-201ENST00000306256 KATNAL1Q9BW62 490 aa23.74■■□□□ 1.39
RER1-201ENST00000306256 KAT6AQ92794 2004 aa23.74■■□□□ 1.39
RER1-201ENST00000306256 HOXD8P13378 290 aaPredicted RBP23.73■■□□□ 1.39
RER1-201ENST00000306256 SELPP16109 830 aa23.73■■□□□ 1.39
RER1-201ENST00000306256 ZNF200P98182 395 aaPredicted RBP23.73■■□□□ 1.39
RER1-201ENST00000306256 HSDL1Q3SXM5 330 aa23.73■■□□□ 1.39
RER1-201ENST00000306256 LRRC8DQ7L1W4 858 aa23.73■■□□□ 1.39
RER1-201ENST00000306256 CERS4Q9HA82 394 aa23.73■■□□□ 1.39
RER1-201ENST00000306256 LY9Q9HBG7 655 aa23.73■■□□□ 1.39
RER1-201ENST00000306256 COL9A3Q14050 684 aaPredicted RBP23.72■■□□□ 1.39
RER1-201ENST00000306256 KCNV1Q6PIU1 500 aa23.72■■□□□ 1.39
RER1-201ENST00000306256 ZNF654Q8IZM8 581 aa23.72■■□□□ 1.39
RER1-201ENST00000306256 WNT8BQ93098 351 aa23.72■■□□□ 1.39
RER1-201ENST00000306256 NCOR1O75376 2440 aa23.71■■□□□ 1.39
RER1-201ENST00000306256 TCF20Q9UGU0 1960 aaKnown RBP23.71■■□□□ 1.39
RER1-201ENST00000306256 ARHGEF15O94989 841 aa23.71■■□□□ 1.39
RER1-201ENST00000306256 CKBP12277 381 aa23.71■■□□□ 1.39
RER1-201ENST00000306256 RBL2Q08999 1139 aa23.71■■□□□ 1.39
RER1-201ENST00000306256 HIC1Q14526 733 aa23.71■■□□□ 1.39
RER1-201ENST00000306256 TJAP1Q5JTD0 557 aa23.71■■□□□ 1.39
RER1-201ENST00000306256 HERC6Q8IVU3 1022 aa23.71■■□□□ 1.39
RER1-201ENST00000306256 MICALL1Q8N3F8 863 aa23.71■■□□□ 1.39
RER1-201ENST00000306256 BCAS3Q9H6U6 928 aa23.71■■□□□ 1.39
RER1-201ENST00000306256 MICAL3Q7RTP6 2002 aa23.71■■□□□ 1.39
RER1-201ENST00000306256 RFXAPO00287 272 aa23.7■■□□□ 1.38
RER1-201ENST00000306256 PRC1O43663 620 aa23.7■■□□□ 1.38
RER1-201ENST00000306256 NBNO60934 754 aa23.7■■□□□ 1.38
RER1-201ENST00000306256 PPFIA4O75335 1185 aa23.7■■□□□ 1.38
RER1-201ENST00000306256 DDAH1O94760 285 aa23.7■■□□□ 1.38
RER1-201ENST00000306256 CTCFLQ8NI51 663 aaPredicted RBP23.7■■□□□ 1.38
RER1-201ENST00000306256 PHOSPHO2Q8TCD6 241 aa23.7■■□□□ 1.38
RER1-201ENST00000306256 LSG1Q9H089 658 aaKnown RBP23.7■■□□□ 1.38
RER1-201ENST00000306256 THEGQ9P2T0 379 aa23.7■■□□□ 1.38
RER1-201ENST00000306256 COL4A4P53420 1690 aaPredicted RBP23.7■■□□□ 1.38
RER1-201ENST00000306256 FRMPD4Q14CM0 1322 aa23.69■■□□□ 1.38
RER1-201ENST00000306256 EPOPA6NHQ4 379 aa23.69■■□□□ 1.38
RER1-201ENST00000306256 BAIAP3O94812 1187 aa23.69■■□□□ 1.38
RER1-201ENST00000306256 TGFB3P10600 412 aa23.69■■□□□ 1.38
RER1-201ENST00000306256 KCNJ6P48051 423 aa23.69■■□□□ 1.38
RER1-201ENST00000306256 MRPS9P82933 396 aaKnown RBP23.69■■□□□ 1.38
RER1-201ENST00000306256 PTK7Q13308 1070 aa23.69■■□□□ 1.38
RER1-201ENST00000306256 TCTN1Q2MV58 587 aa23.69■■□□□ 1.38
RER1-201ENST00000306256 TRIM71Q2Q1W2 868 aaKnown RBP23.69■■□□□ 1.38
RER1-201ENST00000306256 CASC1Q6TDU7 716 aa23.69■■□□□ 1.38
RER1-201ENST00000306256 TMCO2Q7Z6W1 182 aaPredicted RBP23.69■■□□□ 1.38
RER1-201ENST00000306256 SYMPKQ92797 1274 aaKnown RBP23.69■■□□□ 1.38
RER1-201ENST00000306256 C16orf70Q9BSU1 422 aa23.69■■□□□ 1.38
RER1-201ENST00000306256 SPZ1Q9BXG8 430 aa23.69■■□□□ 1.38
RER1-201ENST00000306256 MLXIPQ9HAP2 919 aa23.69■■□□□ 1.38
RER1-201ENST00000306256 PLEKHA8P1O95397 391 aa23.68■■□□□ 1.38
RER1-201ENST00000306256 WDR5P61964 334 aaKnown RBP23.68■■□□□ 1.38
RER1-201ENST00000306256 NFXL1Q6ZNB6 911 aa23.68■■□□□ 1.38
RER1-201ENST00000306256 RRP36Q96EU6 259 aaKnown RBP23.68■■□□□ 1.38
RER1-201ENST00000306256 RTEL1Q9NZ71 1219 aa23.68■■□□□ 1.38
RER1-201ENST00000306256 SH2B2O14492 632 aaPredicted RBP23.67■■□□□ 1.38
RER1-201ENST00000306256 SLC27A2O14975 620 aa23.67■■□□□ 1.38
RER1-201ENST00000306256 CXCL10P02778 98 aa23.67■■□□□ 1.38
RER1-201ENST00000306256 RXRAP19793 462 aa23.67■■□□□ 1.38
RER1-201ENST00000306256 KIF5BP33176 963 aa23.67■■□□□ 1.38
RER1-201ENST00000306256 DEFB103AP81534 67 aa23.67■■□□□ 1.38
RER1-201ENST00000306256 TAP1Q03518 808 aa23.67■■□□□ 1.38
RER1-201ENST00000306256 SEMA3FQ13275 785 aa23.67■■□□□ 1.38
RER1-201ENST00000306256 ZNF618Q5T7W0 954 aa23.67■■□□□ 1.38
RER1-201ENST00000306256 CNKSR3Q6P9H4 555 aa23.67■■□□□ 1.38
RER1-201ENST00000306256 TRAF7Q6Q0C0 670 aa23.67■■□□□ 1.38
RER1-201ENST00000306256 USP17L6PQ6QN14 398 aa23.67■■□□□ 1.38
RER1-201ENST00000306256 SPRED2Q7Z698 418 aa23.67■■□□□ 1.38
RER1-201ENST00000306256 RAB11FIP4Q86YS3 637 aa23.67■■□□□ 1.38
RER1-201ENST00000306256 INPP4AQ96PE3 977 aaPredicted RBP23.67■■□□□ 1.38
RER1-201ENST00000306256 MAP3K14Q99558 947 aa23.67■■□□□ 1.38
RER1-201ENST00000306256 ESYT1Q9BSJ8 1104 aa23.67■■□□□ 1.38
RER1-201ENST00000306256 KIF28PB7ZC32 967 aa23.66■■□□□ 1.38
RER1-201ENST00000306256 TLL1O43897 1013 aa23.66■■□□□ 1.38
RER1-201ENST00000306256 LGALS2P05162 132 aa23.66■■□□□ 1.38
RER1-201ENST00000306256 MCM5P33992 734 aa23.66■■□□□ 1.38
RER1-201ENST00000306256 MBTPS1Q14703 1052 aa23.66■■□□□ 1.38
RER1-201ENST00000306256 GNPTABQ3T906 1256 aa23.66■■□□□ 1.38
RER1-201ENST00000306256 CMTR1Q8N1G2 835 aaKnown RBP23.66■■□□□ 1.38
RER1-201ENST00000306256 SRBD1Q8N5C6 995 aaKnown RBP23.66■■□□□ 1.38
RER1-201ENST00000306256 SMARCC2Q8TAQ2 1214 aa23.66■■□□□ 1.38
RER1-201ENST00000306256 ARNTL2Q8WYA1 636 aa23.66■■□□□ 1.38
RER1-201ENST00000306256 SEC63Q9UGP8 760 aaKnown RBP23.66■■□□□ 1.38
RER1-201ENST00000306256 SPTBN5Q9NRC6 3674 aaKnown RBP23.66■■□□□ 1.38
RER1-201ENST00000306256 LCHNA4D1U4 455 aa23.65■■□□□ 1.38
RER1-201ENST00000306256 CCDC69A6NI79 296 aa23.65■■□□□ 1.38
RER1-201ENST00000306256 NOP56O00567 594 aaKnown RBP23.65■■□□□ 1.38
RER1-201ENST00000306256 PARNO95453 639 aaKnown RBP23.65■■□□□ 1.38
RER1-201ENST00000306256 ICAM3P32942 547 aa23.65■■□□□ 1.38
RER1-201ENST00000306256 CYFIP1Q7L576 1253 aa23.65■■□□□ 1.38
RER1-201ENST00000306256 SKAP1Q86WV1 359 aa23.65■■□□□ 1.38
RER1-201ENST00000306256 ATXN2LQ8WWM7 1075 aaKnown RBP23.65■■□□□ 1.38
RER1-201ENST00000306256 CUL5Q93034 780 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms