RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 CNPY2Q9Y2B0 182 aa30.77■■■□□ 2.52
HDAC3-201ENST00000305264 NCLP19338 710 aaKnown RBP30.76■■■□□ 2.51
HDAC3-201ENST00000305264 ORC2Q13416 577 aaPredicted RBP30.76■■■□□ 2.51
HDAC3-201ENST00000305264 NLRX1Q86UT6 975 aa30.76■■■□□ 2.51
HDAC3-201ENST00000305264 GJA10Q969M2 543 aa30.76■■■□□ 2.51
HDAC3-201ENST00000305264 ABHD16BQ9H3Z7 469 aa30.76■■■□□ 2.51
HDAC3-201ENST00000305264 ZHX1Q9UKY1 873 aaPredicted RBP30.76■■■□□ 2.51
HDAC3-201ENST00000305264 PTPN22Q9Y2R2 807 aa30.76■■■□□ 2.51
HDAC3-201ENST00000305264 DOCK5Q9H7D0 1870 aa30.76■■■□□ 2.51
HDAC3-201ENST00000305264 NASPP49321 788 aaPredicted RBP30.75■■■□□ 2.51
HDAC3-201ENST00000305264 PTGDRQ13258 359 aa30.75■■■□□ 2.51
HDAC3-201ENST00000305264 PTPAQ15257 358 aa30.75■■■□□ 2.51
HDAC3-201ENST00000305264 TAPT1Q6NXT6 567 aa30.75■■■□□ 2.51
HDAC3-201ENST00000305264 C4orf32Q8N8J7 132 aa30.75■■■□□ 2.51
HDAC3-201ENST00000305264 ETNPPLQ8TBG4 499 aa30.75■■■□□ 2.51
HDAC3-201ENST00000305264 MSH4O15457 936 aa30.75■■■□□ 2.51
HDAC3-201ENST00000305264 KRT85P78386 507 aa30.75■■■□□ 2.51
HDAC3-201ENST00000305264 ACVR2BQ13705 512 aa30.75■■■□□ 2.51
HDAC3-201ENST00000305264 MFSD14CQ5VZR4 134 aa30.75■■■□□ 2.51
HDAC3-201ENST00000305264 ATL3Q6DD88 541 aa30.75■■■□□ 2.51
HDAC3-201ENST00000305264 PXYLP1Q8TE99 480 aa30.75■■■□□ 2.51
HDAC3-201ENST00000305264 KCNMB3Q9NPA1 279 aa30.75■■■□□ 2.51
HDAC3-201ENST00000305264 PKD2L1Q9P0L9 805 aa30.75■■■□□ 2.51
HDAC3-201ENST00000305264 FIBPO43427 364 aa30.74■■■□□ 2.51
HDAC3-201ENST00000305264 CALCRLQ16602 461 aa30.74■■■□□ 2.51
HDAC3-201ENST00000305264 HMGCRP04035 888 aa30.74■■■□□ 2.51
HDAC3-201ENST00000305264 CTU1Q7Z7A3 348 aaKnown RBP30.74■■■□□ 2.51
HDAC3-201ENST00000305264 HAS1Q92839 578 aa30.74■■■□□ 2.51
HDAC3-201ENST00000305264 SPATA31C2B4DYI2 1134 aa30.73■■■□□ 2.51
HDAC3-201ENST00000305264 ARIH2O95376 493 aa30.73■■■□□ 2.51
HDAC3-201ENST00000305264 ZNF865P0CJ78 1059 aaPredicted RBP30.73■■■□□ 2.51
HDAC3-201ENST00000305264 ICAM3P32942 547 aa30.73■■■□□ 2.51
HDAC3-201ENST00000305264 ATP2C1P98194 919 aaPredicted RBP30.73■■■□□ 2.51
HDAC3-201ENST00000305264 SLAIN1Q8ND83 568 aa30.73■■■□□ 2.51
HDAC3-201ENST00000305264 MTMR9Q96QG7 549 aa30.73■■■□□ 2.51
HDAC3-201ENST00000305264 AGO4Q9HCK5 861 aaKnown RBP30.73■■■□□ 2.51
HDAC3-201ENST00000305264 CFAP45Q9UL16 551 aa30.73■■■□□ 2.51
HDAC3-201ENST00000305264 LINC00301Q8NCQ3 95 aa30.72■■■□□ 2.51
HDAC3-201ENST00000305264 TRPV1Q8NER1 839 aa30.72■■■□□ 2.51
HDAC3-201ENST00000305264 CEP131Q9UPN4 1083 aa30.72■■■□□ 2.51
HDAC3-201ENST00000305264 ATP9AO75110 1047 aa30.72■■■□□ 2.51
HDAC3-201ENST00000305264 OR52Z1P0C646 297 aa30.72■■■□□ 2.51
HDAC3-201ENST00000305264 CYBAP13498 195 aa30.72■■■□□ 2.51
HDAC3-201ENST00000305264 TMEM63BQ5T3F8 832 aa30.72■■■□□ 2.51
HDAC3-201ENST00000305264 CDHR1Q96JP9 859 aa30.72■■■□□ 2.51
HDAC3-201ENST00000305264 ZNF577Q9BSK1 485 aa30.72■■■□□ 2.51
HDAC3-201ENST00000305264 GDPD2Q9HCC8 539 aa30.72■■■□□ 2.51
HDAC3-201ENST00000305264 GRK4P32298 578 aa30.71■■■□□ 2.51
HDAC3-201ENST00000305264 ADCYAP1R1P41586 468 aa30.71■■■□□ 2.51
HDAC3-201ENST00000305264 SP2Q02086 613 aa30.71■■■□□ 2.51
HDAC3-201ENST00000305264 CACNB2Q08289 660 aaPredicted RBP30.71■■■□□ 2.51
HDAC3-201ENST00000305264 ITGB3BPQ13352 177 aaPredicted RBP30.71■■■□□ 2.51
HDAC3-201ENST00000305264 STK38Q15208 465 aa30.71■■■□□ 2.51
HDAC3-201ENST00000305264 SCFD2Q8WU76 684 aa30.71■■■□□ 2.51
HDAC3-201ENST00000305264 RBM47A0AV96 593 aaKnown RBP30.7■■■□□ 2.51
HDAC3-201ENST00000305264 IPO5O00410 1097 aaKnown RBP30.7■■■□□ 2.51
HDAC3-201ENST00000305264 YEATS4O95619 227 aa30.7■■■□□ 2.51
HDAC3-201ENST00000305264 BMP15O95972 392 aa30.7■■■□□ 2.51
HDAC3-201ENST00000305264 PRKAR2AP13861 404 aaKnown RBP30.7■■■□□ 2.51
HDAC3-201ENST00000305264 SLC39A14Q15043 492 aa30.7■■■□□ 2.51
HDAC3-201ENST00000305264 CCDC144BQ3MJ40 725 aa30.7■■■□□ 2.51
HDAC3-201ENST00000305264 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.7■■■□□ 2.5
HDAC3-201ENST00000305264 MAFGO15525 162 aa30.7■■■□□ 2.5
HDAC3-201ENST00000305264 KCNA2P16389 499 aa30.7■■■□□ 2.5
HDAC3-201ENST00000305264 UBA1P22314 1058 aaKnown RBP30.7■■■□□ 2.5
HDAC3-201ENST00000305264 LY6KQ17RY6 165 aa30.7■■■□□ 2.5
HDAC3-201ENST00000305264 CCDC62Q6P9F0 684 aa30.7■■■□□ 2.5
HDAC3-201ENST00000305264 SLC5A5Q92911 643 aa30.7■■■□□ 2.5
HDAC3-201ENST00000305264 TBX3O15119 743 aa30.69■■■□□ 2.5
HDAC3-201ENST00000305264 BAG4O95429 457 aaKnown RBP30.69■■■□□ 2.5
HDAC3-201ENST00000305264 PTGS1P23219 599 aa30.69■■■□□ 2.5
HDAC3-201ENST00000305264 MARCKSP29966 332 aaPredicted RBP30.69■■■□□ 2.5
HDAC3-201ENST00000305264 BCAS3Q9H6U6 928 aa30.69■■■□□ 2.5
HDAC3-201ENST00000305264 NRBP1Q9UHY1 535 aa30.69■■■□□ 2.5
HDAC3-201ENST00000305264 DDX41Q9UJV9 622 aaKnown RBP30.69■■■□□ 2.5
HDAC3-201ENST00000305264 LAD1O00515 517 aa30.68■■■□□ 2.5
HDAC3-201ENST00000305264 ADCY6O43306 1168 aa30.68■■■□□ 2.5
HDAC3-201ENST00000305264 INHAP05111 366 aa30.68■■■□□ 2.5
HDAC3-201ENST00000305264 TTLL4Q14679 1199 aa30.68■■■□□ 2.5
HDAC3-201ENST00000305264 SH3TC2Q8TF17 1288 aa30.68■■■□□ 2.5
HDAC3-201ENST00000305264 LEO1Q8WVC0 666 aaPredicted RBP30.68■■■□□ 2.5
HDAC3-201ENST00000305264 TXNP10599 105 aaKnown RBP30.68■■■□□ 2.5
HDAC3-201ENST00000305264 TGFB3P10600 412 aa30.68■■■□□ 2.5
HDAC3-201ENST00000305264 MAP3K21Q5TCX8 1036 aa30.68■■■□□ 2.5
HDAC3-201ENST00000305264 SPATA32Q96LK8 384 aa30.68■■■□□ 2.5
HDAC3-201ENST00000305264 FAM20AQ96MK3 541 aa30.68■■■□□ 2.5
HDAC3-201ENST00000305264 SPTLC2O15270 562 aa30.67■■■□□ 2.5
HDAC3-201ENST00000305264 MARCH6O60337 910 aa30.67■■■□□ 2.5
HDAC3-201ENST00000305264 SORBS3O60504 671 aa30.67■■■□□ 2.5
HDAC3-201ENST00000305264 TXKP42681 527 aa30.67■■■□□ 2.5
HDAC3-201ENST00000305264 GJC2Q5T442 439 aaPredicted RBP30.67■■■□□ 2.5
HDAC3-201ENST00000305264 KCNV1Q6PIU1 500 aa30.67■■■□□ 2.5
HDAC3-201ENST00000305264 RCOR1Q9UKL0 485 aa30.67■■■□□ 2.5
HDAC3-201ENST00000305264 DHX15O43143 795 aaKnown RBP30.66■■■□□ 2.5
HDAC3-201ENST00000305264 IL17AQ16552 155 aa30.66■■■□□ 2.5
HDAC3-201ENST00000305264 LRCH2Q5VUJ6 765 aa30.66■■■□□ 2.5
HDAC3-201ENST00000305264 SLFN12Q8IYM2 578 aa30.66■■■□□ 2.5
HDAC3-201ENST00000305264 COPS5Q92905 334 aa30.66■■■□□ 2.5
HDAC3-201ENST00000305264 SCAND2PQ9GZW5 306 aaPredicted RBP30.66■■■□□ 2.5
HDAC3-201ENST00000305264 BRCA2P51587 3418 aa30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms