RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 FRMPD4Q14CM0 1322 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 TET1Q8NFU7 2136 aa11.02□□□□□ -0.64
HMHB1-201ENST00000289448 HAS3O00219 553 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 DLL1O00548 723 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 PITPNM1O00562 1244 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 MEIS2O14770 477 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 GGPS1O95749 300 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 F2P00734 622 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 IQCF3P0C7M6 154 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 MYOGP15173 224 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 SMARCA1P28370 1054 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 KIF5BP33176 963 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 PSEN2P49810 448 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 ZNF200P98182 395 aaPredicted RBP11.02□□□□□ -0.65
HMHB1-201ENST00000289448 TRAF1Q13077 416 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 MFSD10Q14728 455 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.02□□□□□ -0.65
HMHB1-201ENST00000289448 RASEFQ8IZ41 740 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 TMTC2Q8N394 836 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 WNT8BQ93098 351 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 TCEANC2Q96MN5 208 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 SPATA33Q96N06 139 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 ALG1Q9BT22 464 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 NKX2-4Q9H2Z4 354 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 TELO2Q9Y4R8 837 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 SCN5AQ14524 2016 aa11.02□□□□□ -0.65
HMHB1-201ENST00000289448 CCDC69A6NI79 296 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 ZBBXA8MT70 800 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 PPFIA4O75335 1185 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 PFKMP08237 780 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 TGFB3P10600 412 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 EXOSC10Q01780 885 aaKnown RBP11.01□□□□□ -0.65
HMHB1-201ENST00000289448 KIAA0753Q2KHM9 967 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 TCTN1Q2MV58 587 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 ADCK5Q3MIX3 580 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 KCNV1Q6PIU1 500 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 TMTC3Q6ZXV5 915 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 SGMS1Q86VZ5 419 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 CCDC82Q8N4S0 544 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 C7orf31Q8N865 590 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 USP38Q8NB14 1042 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 FANCBQ8NB91 859 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 RETREG2Q8NC44 543 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 INPP4AQ96PE3 977 aaPredicted RBP11.01□□□□□ -0.65
HMHB1-201ENST00000289448 LZTS2Q9BRK4 669 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 C16orf70Q9BSU1 422 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 MTIF3Q9H2K0 278 aaKnown RBP11.01□□□□□ -0.65
HMHB1-201ENST00000289448 PRDM12Q9H4Q4 367 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 RTEL1Q9NZ71 1219 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 GTF2IRD1Q9UHL9 959 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 NOD1Q9Y239 953 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 SLC12A7Q9Y666 1083 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 SLC4A7Q9Y6M7 1214 aa11.01□□□□□ -0.65
HMHB1-201ENST00000289448 BDP1A6H8Y1 2624 aa11□□□□□ -0.65
HMHB1-201ENST00000289448 SPATA31C2B4DYI2 1134 aa11□□□□□ -0.65
HMHB1-201ENST00000289448 PIK3CDO00329 1044 aa11□□□□□ -0.65
HMHB1-201ENST00000289448 ATP2A2P16615 1042 aaKnown RBP11□□□□□ -0.65
HMHB1-201ENST00000289448 ICAM3P32942 547 aa11□□□□□ -0.65
HMHB1-201ENST00000289448 RFC2P35250 354 aa11□□□□□ -0.65
HMHB1-201ENST00000289448 GNAQP50148 359 aa11□□□□□ -0.65
HMHB1-201ENST00000289448 BFSP2Q13515 415 aa11□□□□□ -0.65
HMHB1-201ENST00000289448 ADGRE1Q14246 886 aa11□□□□□ -0.65
HMHB1-201ENST00000289448 RAB30Q15771 203 aa11□□□□□ -0.65
HMHB1-201ENST00000289448 TRIM71Q2Q1W2 868 aaKnown RBP11□□□□□ -0.65
HMHB1-201ENST00000289448 TSGA10IPQ3SY00 556 aa11□□□□□ -0.65
HMHB1-201ENST00000289448 TRAF7Q6Q0C0 670 aa11□□□□□ -0.65
HMHB1-201ENST00000289448 MICU3Q86XE3 530 aa11□□□□□ -0.65
HMHB1-201ENST00000289448 MLXIPQ9HAP2 919 aa11□□□□□ -0.65
HMHB1-201ENST00000289448 SEC63Q9UGP8 760 aaKnown RBP11□□□□□ -0.65
HMHB1-201ENST00000289448 MSRAQ9UJ68 235 aa11□□□□□ -0.65
HMHB1-201ENST00000289448 BRPF3Q9ULD4 1205 aa11□□□□□ -0.65
HMHB1-201ENST00000289448 TRIP12Q14669 1992 aaPredicted RBP10.99□□□□□ -0.65
HMHB1-201ENST00000289448 NCOR1O75376 2440 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 NBNO60934 754 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 CDC45O75419 566 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 ARHGEF15O94989 841 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 CALM1P0DP23 149 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 CALM2P0DP24 149 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 CALM3P0DP25 149 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 CKBP12277 381 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 SELPP16109 830 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 RBL2Q08999 1139 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 FUT2Q10981 343 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 MBTPS1Q14703 1052 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 UBE2SQ16763 222 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 PCNX4Q63HM2 1172 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 APOA5Q6Q788 366 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 LRRC8DQ7L1W4 858 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 CYFIP1Q7L576 1253 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 SMARCC2Q8TAQ2 1214 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 CAGE1Q8TC20 777 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 AFAP1L1Q8TED9 768 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 NEK1Q96PY6 1258 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 KATNAL1Q9BW62 490 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 FTOQ9C0B1 505 aaKnown RBP eCLIP10.99□□□□□ -0.65
HMHB1-201ENST00000289448 PSTPIP2Q9H939 334 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 SLC28A3Q9HAS3 691 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 PPP4R2Q9NY27 417 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 MYH7BA7E2Y1 1941 aa10.99□□□□□ -0.65
HMHB1-201ENST00000289448 FIBPO43427 364 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms