RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 MIEF2Q96C03 454 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 ZMAT2Q96NC0 199 aaKnown RBP13.17□□□□□ -0.3
ERBB2-201ENST00000269571 EYA3Q99504 573 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 ZNF446Q9NWS9 450 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 PGRMC1O00264 195 aaKnown RBP13.17□□□□□ -0.3
ERBB2-201ENST00000269571 THAP12O43422 761 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 PALMO75781 387 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 CYP4A11Q02928 519 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 MFSD14BQ5SR56 506 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 FOXR1Q6PIV2 292 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 MARCH10Q8NA82 808 aaPredicted RBP13.17□□□□□ -0.3
ERBB2-201ENST00000269571 RETREG2Q8NC44 543 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 KCNV2Q8TDN2 545 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 LARSQ9P2J5 1176 aaKnown RBP13.17□□□□□ -0.3
ERBB2-201ENST00000269571 PCDHA12Q9UN75 941 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 NEXMIFQ5QGS0 1516 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 MROH7-TTC4A0A0A0MT08 1334 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 SETBP1Q9Y6X0 1596 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 POLR1AO95602 1720 aaPredicted RBP13.16□□□□□ -0.3
ERBB2-201ENST00000269571 H0Y3Z8 333 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 IRAK1P51617 712 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 MAGOHP61326 146 aaKnown RBP13.16□□□□□ -0.3
ERBB2-201ENST00000269571 GRIN1Q05586 938 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 GFPT1Q06210 699 aaPredicted RBP13.16□□□□□ -0.3
ERBB2-201ENST00000269571 MAN2A1Q16706 1144 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 CCDC62Q6P9F0 684 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 KIRREL3Q8IZU9 778 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 SYNE4Q8N205 404 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 GGT7Q9UJ14 662 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.16□□□□□ -0.3
ERBB2-201ENST00000269571 LGALS16A8MUM7 142 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 SASH3O75995 380 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 MCAMP43121 646 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 GTF2IP78347 998 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 EXOSC10Q01780 885 aaKnown RBP13.16□□□□□ -0.3
ERBB2-201ENST00000269571 KANSL2Q9H9L4 492 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 GPR108Q9NPR9 543 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 ETAA1Q9NY74 926 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 NEDD4P46934 1319 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 UBN2Q6ZU65 1347 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 SKAP2O75563 359 aaPredicted RBP13.16□□□□□ -0.3
ERBB2-201ENST00000269571 SCARF1Q14162 830 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 EXOC3L4Q17RC7 722 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 BEND6Q5SZJ8 279 aaPredicted RBP13.16□□□□□ -0.3
ERBB2-201ENST00000269571 NLRP14Q86W24 1093 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 SPATA4Q8NEY3 305 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 DNAI2Q9GZS0 605 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 QTRT2Q9H974 415 aaKnown RBP13.16□□□□□ -0.3
ERBB2-201ENST00000269571 ADAMTS13Q76LX8 1427 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 POC1B-GALNT4F8VUJ3 575 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 LIFRP42702 1097 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 KCNJ6P48051 423 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 COG7P83436 770 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 HDLBPQ00341 1268 aaKnown RBP13.16□□□□□ -0.3
ERBB2-201ENST00000269571 CHRNDQ07001 517 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 SNX1Q13596 522 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 PSMD6Q15008 389 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 TMC4Q7Z404 712 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 CROCCP2Q86T23 111 aa13.16□□□□□ -0.3
ERBB2-201ENST00000269571 ARHGEF35A5YM69 484 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 GAS8O95995 478 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 CYP4F22Q6NT55 531 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 FAM43BQ6ZT52 329 aaPredicted RBP13.15□□□□□ -0.3
ERBB2-201ENST00000269571 NLRP10Q86W26 655 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 IQCDQ96DY2 449 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 DDX47Q9H0S4 455 aaKnown RBP13.15□□□□□ -0.3
ERBB2-201ENST00000269571 RASSF10A6NK89 507 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 HMGB1P1B2RPK0 211 aaPredicted RBP13.15□□□□□ -0.3
ERBB2-201ENST00000269571 LRRN2O75325 713 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 NR2F2P24468 414 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 SLC8A3P57103 927 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 TSGA10IPQ3SY00 556 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 NUGGCQ68CJ6 796 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 PPP1R21Q6ZMI0 780 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 FAM196AQ6ZSG2 479 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 RAB3IL1Q8TBN0 382 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 COMMD10Q9Y6G5 202 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 TRIM37O94972 964 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 ST3GAL1Q11201 340 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 ZNF449Q6P9G9 518 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 LRRC47Q8N1G4 583 aaKnown RBP13.15□□□□□ -0.3
ERBB2-201ENST00000269571 MS4A14Q96JA4 679 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 FNBP1Q96RU3 617 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 CPVLQ9H3G5 476 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 ARPP21Q9UBL0 812 aaPredicted RBP13.15□□□□□ -0.3
ERBB2-201ENST00000269571 KIAA1024Q9UPX6 916 aa13.15□□□□□ -0.3
ERBB2-201ENST00000269571 UBE2Q2LH0YL09 131 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 HLFQ16534 295 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 DPP8Q6V1X1 898 aaPredicted RBP13.14□□□□□ -0.31
ERBB2-201ENST00000269571 TPH2Q8IWU9 490 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 LARP4BQ92615 738 aaKnown RBP13.14□□□□□ -0.31
ERBB2-201ENST00000269571 FAM210AQ96ND0 272 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 STRBPQ96SI9 672 aaKnown RBP13.14□□□□□ -0.31
ERBB2-201ENST00000269571 SNX24Q9Y343 169 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 LRRC53A6NM62 1247 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 EIF3HO15372 352 aaKnown RBP eCLIP13.14□□□□□ -0.315e-7■■□□□ 11.5
ERBB2-201ENST00000269571 MMP14P50281 582 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 TRIP13Q15645 432 aaPredicted RBP13.14□□□□□ -0.31
ERBB2-201ENST00000269571 JDP2Q8WYK2 163 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 FMO2Q99518 471 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms