RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 GJA9P57773 515 aa14.54□□□□□ -0.08
SS18-202ENST00000269138 BEX3Q00994 111 aa14.54□□□□□ -0.08
SS18-202ENST00000269138 NONOQ15233 471 aaKnown RBP eCLIP14.54□□□□□ -0.08
SS18-202ENST00000269138 GNPTABQ3T906 1256 aa14.54□□□□□ -0.08
SS18-202ENST00000269138 CEP55Q53EZ4 464 aa14.54□□□□□ -0.08
SS18-202ENST00000269138 NLRX1Q86UT6 975 aa14.54□□□□□ -0.08
SS18-202ENST00000269138 OR6J1Q8NGC5 347 aa14.54□□□□□ -0.08
SS18-202ENST00000269138 UIMC1Q96RL1 719 aa14.54□□□□□ -0.08
SS18-202ENST00000269138 BRMS1Q9HCU9 246 aa14.54□□□□□ -0.08
SS18-202ENST00000269138 PKD2L1Q9P0L9 805 aa14.54□□□□□ -0.08
SS18-202ENST00000269138 IGLV3-22A0A075B6J6 115 aa14.53□□□□□ -0.08
SS18-202ENST00000269138 MEIS1O00470 390 aa14.53□□□□□ -0.08
SS18-202ENST00000269138 FIBPO43427 364 aa14.53□□□□□ -0.08
SS18-202ENST00000269138 UBA1P22314 1058 aaKnown RBP14.53□□□□□ -0.08
SS18-202ENST00000269138 ARHGAP1Q07960 439 aa14.53□□□□□ -0.08
SS18-202ENST00000269138 SAFBQ15424 915 aaKnown RBP eCLIP14.53□□□□□ -0.08
SS18-202ENST00000269138 ARRDC4Q8NCT1 418 aa14.53□□□□□ -0.08
SS18-202ENST00000269138 KLHDC9Q8NEP7 349 aa14.53□□□□□ -0.08
SS18-202ENST00000269138 GPRASP2Q96D09 838 aa14.53□□□□□ -0.08
SS18-202ENST00000269138 INTS4Q96HW7 963 aaKnown RBP14.53□□□□□ -0.08
SS18-202ENST00000269138 AP5M1Q9H0R1 490 aa14.53□□□□□ -0.08
SS18-202ENST00000269138 Q9Y3F1 56 aa14.53□□□□□ -0.08
SS18-202ENST00000269138 KIF3AQ9Y496 699 aa14.53□□□□□ -0.08
SS18-202ENST00000269138 TELO2Q9Y4R8 837 aa14.53□□□□□ -0.08
SS18-202ENST00000269138 BRCA2P51587 3418 aa14.53□□□□□ -0.08
SS18-202ENST00000269138 KIF28PB7ZC32 967 aa14.52□□□□□ -0.08
SS18-202ENST00000269138 NKRFO15226 690 aaKnown RBP eCLIP14.52□□□□□ -0.08
SS18-202ENST00000269138 FARP2O94887 1054 aaPredicted RBP14.52□□□□□ -0.08
SS18-202ENST00000269138 GGPS1O95749 300 aa14.52□□□□□ -0.08
SS18-202ENST00000269138 GH1P01241 217 aa14.52□□□□□ -0.08
SS18-202ENST00000269138 TGFB3P10600 412 aa14.52□□□□□ -0.08
SS18-202ENST00000269138 CIITAP33076 1130 aa14.52□□□□□ -0.08
SS18-202ENST00000269138 USP11P51784 963 aa14.52□□□□□ -0.08
SS18-202ENST00000269138 MTMR1Q13613 665 aa14.52□□□□□ -0.08
SS18-202ENST00000269138 GNASQ5JWF2 1037 aa14.52□□□□□ -0.08
SS18-202ENST00000269138 LARP1BQ659C4 914 aaKnown RBP14.52□□□□□ -0.08
SS18-202ENST00000269138 CCSAPQ6IQ19 270 aaPredicted RBP14.52□□□□□ -0.08
SS18-202ENST00000269138 KCNV1Q6PIU1 500 aa14.52□□□□□ -0.08
SS18-202ENST00000269138 PLA2G4DQ86XP0 818 aa14.52□□□□□ -0.08
SS18-202ENST00000269138 SPRYD3Q8NCJ5 442 aa14.52□□□□□ -0.08
SS18-202ENST00000269138 PAWRQ96IZ0 340 aaKnown RBP14.52□□□□□ -0.08
SS18-202ENST00000269138 KCNH7Q9NS40 1196 aa14.52□□□□□ -0.08
SS18-202ENST00000269138 TDP2O95551 362 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 KCNA2P16389 499 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 NKX3-2P78367 333 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 KCNA10Q16322 511 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 FSCN1Q16658 493 aaKnown RBP14.51□□□□□ -0.09
SS18-202ENST00000269138 PRR16Q569H4 304 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 CELF3Q5SZQ8 465 aaKnown RBP14.51□□□□□ -0.09
SS18-202ENST00000269138 MYSM1Q5VVJ2 828 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 UBE2Q1Q7Z7E8 422 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 RNF180Q86T96 592 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 DHX37Q8IY37 1157 aaKnown RBP14.51□□□□□ -0.09
SS18-202ENST00000269138 AFG1LQ8WV93 481 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 LENG9Q96B70 501 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 SPC25Q9HBM1 224 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 KIAA1217Q5T5P2 1943 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 H3BQV1 296 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 DNM1LO00429 736 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 WNT7AO00755 349 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 LETM2Q2VYF4 491 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 IFFO2Q5TF58 517 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 CYFIP1Q7L576 1253 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 NIPA1Q7RTP0 329 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 ANKLE1Q8NAG6 615 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 FERMT2Q96AC1 680 aa14.51□□□□□ -0.09
SS18-202ENST00000269138 FOXP1Q9H334 677 aaPredicted RBP14.51□□□□□ -0.09
SS18-202ENST00000269138 AGO4Q9HCK5 861 aaKnown RBP14.51□□□□□ -0.09
SS18-202ENST00000269138 FRMPD3Q5JV73 1810 aa14.5□□□□□ -0.09
SS18-202ENST00000269138 MYH7BA7E2Y1 1941 aa14.5□□□□□ -0.09
SS18-202ENST00000269138 CYP3A7-CYP3A51PA0A087WV96 503 aa14.5□□□□□ -0.09
SS18-202ENST00000269138 KBTBD13C9JR72 458 aa14.5□□□□□ -0.09
SS18-202ENST00000269138 CYP3A7P24462 503 aa14.5□□□□□ -0.09
SS18-202ENST00000269138 CST5P28325 142 aaPredicted RBP14.5□□□□□ -0.09
SS18-202ENST00000269138 ITGB3BPQ13352 177 aaPredicted RBP14.5□□□□□ -0.09
SS18-202ENST00000269138 LAMC2Q13753 1193 aa14.5□□□□□ -0.09
SS18-202ENST00000269138 MCTP1Q6DN14 999 aa14.5□□□□□ -0.09
SS18-202ENST00000269138 NEK8Q86SG6 692 aa14.5□□□□□ -0.09
SS18-202ENST00000269138 GJA10Q969M2 543 aa14.5□□□□□ -0.09
SS18-202ENST00000269138 CDHR1Q96JP9 859 aa14.5□□□□□ -0.09
SS18-202ENST00000269138 SENP7Q9BQF6 1050 aa14.5□□□□□ -0.09
SS18-202ENST00000269138 MLXIPQ9HAP2 919 aa14.5□□□□□ -0.09
SS18-202ENST00000269138 A6NJR5 290 aa14.49□□□□□ -0.09
SS18-202ENST00000269138 MAFGO15525 162 aa14.49□□□□□ -0.09
SS18-202ENST00000269138 SLC37A4O43826 429 aa14.49□□□□□ -0.09
SS18-202ENST00000269138 ASGR1P07306 291 aa14.49□□□□□ -0.09
SS18-202ENST00000269138 HSP90AA1P07900 732 aaKnown RBP14.49□□□□□ -0.09
SS18-202ENST00000269138 COL6A1P12109 1028 aa14.49□□□□□ -0.09
SS18-202ENST00000269138 CAPN2P17655 700 aa14.49□□□□□ -0.09
SS18-202ENST00000269138 ATP2B1P20020 1258 aa14.49□□□□□ -0.09
SS18-202ENST00000269138 U2AF2P26368 475 aaKnown RBP eCLIP14.49□□□□□ -0.091e-7■■■□□ 16.4
SS18-202ENST00000269138 ACLYP53396 1101 aa14.49□□□□□ -0.09
SS18-202ENST00000269138 SP4Q02446 784 aa14.49□□□□□ -0.09
SS18-202ENST00000269138 GNL2Q13823 731 aaKnown RBP14.49□□□□□ -0.09
SS18-202ENST00000269138 NEDD9Q14511 834 aa14.49□□□□□ -0.09
SS18-202ENST00000269138 HSDL1Q3SXM5 330 aa14.49□□□□□ -0.09
SS18-202ENST00000269138 NOSTRINQ8IVI9 506 aa14.49□□□□□ -0.09
SS18-202ENST00000269138 EMID1Q96A84 441 aaPredicted RBP14.49□□□□□ -0.09
SS18-202ENST00000269138 SPATA33Q96N06 139 aa14.49□□□□□ -0.09
SS18-202ENST00000269138 MBOAT7Q96N66 472 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms