RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 CLDND1Q9NY35 253 aa15.38■□□□□ 0.05
SGCA-201ENST00000262018 SPTBN4Q9H254 2564 aa15.37■□□□□ 0.05
SGCA-201ENST00000262018 ABHD14A-ACY1A0A1B0GW23 586 aa15.37■□□□□ 0.05
SGCA-201ENST00000262018 TMEM232C9JQI7 657 aa15.37■□□□□ 0.05
SGCA-201ENST00000262018 SLC3A2P08195 630 aaKnown RBP15.37■□□□□ 0.05
SGCA-201ENST00000262018 PPARAQ07869 468 aa15.37■□□□□ 0.05
SGCA-201ENST00000262018 PTGISQ16647 500 aa15.37■□□□□ 0.05
SGCA-201ENST00000262018 NSMFQ6X4W1 530 aa15.37■□□□□ 0.05
SGCA-201ENST00000262018 LRRC8DQ7L1W4 858 aa15.37■□□□□ 0.05
SGCA-201ENST00000262018 BMP8AQ7Z5Y6 402 aa15.37■□□□□ 0.05
SGCA-201ENST00000262018 RNF135Q8IUD6 432 aa15.37■□□□□ 0.05
SGCA-201ENST00000262018 CCDC83Q8IWF9 413 aa15.37■□□□□ 0.05
SGCA-201ENST00000262018 SUGP1Q8IWZ8 645 aaKnown RBP15.37■□□□□ 0.05
SGCA-201ENST00000262018 LRRC47Q8N1G4 583 aaKnown RBP15.37■□□□□ 0.05
SGCA-201ENST00000262018 CAGE1Q8TC20 777 aa15.37■□□□□ 0.05
SGCA-201ENST00000262018 EDAQ92838 391 aa15.37■□□□□ 0.05
SGCA-201ENST00000262018 TNPO1Q92973 898 aaKnown RBP15.37■□□□□ 0.05
SGCA-201ENST00000262018 POP1Q99575 1024 aaKnown RBP15.37■□□□□ 0.05
SGCA-201ENST00000262018 CYP39A1Q9NYL5 469 aa15.37■□□□□ 0.05
SGCA-201ENST00000262018 SCN10AQ9Y5Y9 1956 aa15.37■□□□□ 0.05
SGCA-201ENST00000262018 TRIP12Q14669 1992 aaPredicted RBP15.36■□□□□ 0.05
SGCA-201ENST00000262018 TMEM221A6NGB7 291 aa15.36■□□□□ 0.05
SGCA-201ENST00000262018 M0R296 226 aa15.36■□□□□ 0.05
SGCA-201ENST00000262018 BMP3P12645 472 aa15.36■□□□□ 0.05
SGCA-201ENST00000262018 SELPP16109 830 aa15.36■□□□□ 0.05
SGCA-201ENST00000262018 MCM5P33992 734 aa15.36■□□□□ 0.05
SGCA-201ENST00000262018 IKQ13123 557 aaPredicted RBP15.36■□□□□ 0.05
SGCA-201ENST00000262018 CLUL1Q15846 466 aa15.36■□□□□ 0.05
SGCA-201ENST00000262018 MUM1L1Q5H9M0 696 aa15.36■□□□□ 0.05
SGCA-201ENST00000262018 CLEC17AQ6ZS10 378 aa15.36■□□□□ 0.05
SGCA-201ENST00000262018 MORC4Q8TE76 937 aa15.36■□□□□ 0.05
SGCA-201ENST00000262018 ZNF287Q9HBT7 754 aa15.36■□□□□ 0.05
SGCA-201ENST00000262018 ANAPC4Q9UJX5 808 aa15.36■□□□□ 0.05
SGCA-201ENST00000262018 INSL6Q9Y581 213 aa15.36■□□□□ 0.05
SGCA-201ENST00000262018 GREB1LQ9C091 1923 aaPredicted RBP15.36■□□□□ 0.05
SGCA-201ENST00000262018 CFAP54Q96N23 3096 aa15.36■□□□□ 0.05
SGCA-201ENST00000262018 RBAK-RBAKDNI3L0D1 243 aa15.35■□□□□ 0.05
SGCA-201ENST00000262018 KPNA6O60684 536 aa15.35■□□□□ 0.05
SGCA-201ENST00000262018 NBNO60934 754 aa15.35■□□□□ 0.05
SGCA-201ENST00000262018 CXCL10P02778 98 aa15.35■□□□□ 0.05
SGCA-201ENST00000262018 TRDNQ13061 729 aa15.35■□□□□ 0.05
SGCA-201ENST00000262018 GPM6BQ13491 265 aa15.35■□□□□ 0.05
SGCA-201ENST00000262018 IKBKEQ14164 716 aa15.35■□□□□ 0.05
SGCA-201ENST00000262018 PKN1Q16512 942 aa15.35■□□□□ 0.05
SGCA-201ENST00000262018 EPC2Q52LR7 807 aa15.35■□□□□ 0.05
SGCA-201ENST00000262018 SLFN13Q68D06 897 aa15.35■□□□□ 0.05
SGCA-201ENST00000262018 RALYLQ86SE5 291 aaKnown RBP15.35■□□□□ 0.05
SGCA-201ENST00000262018 BRF1Q92994 677 aa15.35■□□□□ 0.05
SGCA-201ENST00000262018 CHMP4CQ96CF2 233 aa15.35■□□□□ 0.05
SGCA-201ENST00000262018 LRRC2Q9BYS8 371 aa15.35■□□□□ 0.05
SGCA-201ENST00000262018 NSUN3Q9H649 340 aaKnown RBP15.35■□□□□ 0.05
SGCA-201ENST00000262018 SMC3Q9UQE7 1217 aa15.35■□□□□ 0.05
SGCA-201ENST00000262018 PTPRZ1P23471 2315 aaPredicted RBP15.35■□□□□ 0.05
SGCA-201ENST00000262018 PRC1O43663 620 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 EFCAB14O75071 495 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 PARNO95453 639 aaKnown RBP15.34■□□□□ 0.05
SGCA-201ENST00000262018 PTMSP20962 102 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 STAT2P52630 851 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 EVCP57679 992 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 ANTXR2P58335 489 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 SNAP25P60880 206 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 PDE4BQ07343 736 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 COL19A1Q14993 1142 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 SMAD2Q15796 467 aaKnown RBP15.34■□□□□ 0.05
SGCA-201ENST00000262018 TRIM67Q6ZTA4 783 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 RPAINQ86UA6 219 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 NECAB1Q8N987 351 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 GMCL1P1Q8NEA9 526 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 STAG1Q8WVM7 1258 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 MKL1Q969V6 931 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 ZDHHC9Q9Y397 364 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 USP34Q70CQ2 3546 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 IGKV6D-41A0A0C4DH26 115 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 RBM47A0AV96 593 aaKnown RBP15.34■□□□□ 0.05
SGCA-201ENST00000262018 PFKFB2O60825 505 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 BRD1O95696 1058 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 MCM4P33991 863 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 FGD1P98174 961 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 PKP1Q13835 747 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 GDF6Q6KF10 455 aaPredicted RBP15.34■□□□□ 0.05
SGCA-201ENST00000262018 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.34■□□□□ 0.05
SGCA-201ENST00000262018 FAM160B2Q86V87 743 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 CHURC1Q8WUH1 139 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 DHX38Q92620 1227 aaKnown RBP15.34■□□□□ 0.05
SGCA-201ENST00000262018 ATOH1Q92858 354 aaPredicted RBP15.34■□□□□ 0.05
SGCA-201ENST00000262018 COPS5Q92905 334 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 GTF3C6Q969F1 213 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 CEP95Q96GE4 821 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 CNNM2Q9H8M5 875 aa15.34■□□□□ 0.05
SGCA-201ENST00000262018 ADD3Q9UEY8 706 aaKnown RBP15.34■□□□□ 0.05
SGCA-201ENST00000262018 A6NJR5 290 aa15.33■□□□□ 0.04
SGCA-201ENST00000262018 H3BNC9 293 aa15.33■□□□□ 0.04
SGCA-201ENST00000262018 MBTPS2O43462 519 aa15.33■□□□□ 0.04
SGCA-201ENST00000262018 PCP11498 1178 aaKnown RBP15.33■□□□□ 0.04
SGCA-201ENST00000262018 LTBRP36941 435 aa15.33■□□□□ 0.04
SGCA-201ENST00000262018 ALDH5A1P51649 535 aaPredicted RBP15.33■□□□□ 0.04
SGCA-201ENST00000262018 CTDSPL2Q05D32 466 aa15.33■□□□□ 0.04
SGCA-201ENST00000262018 PPP2R5BQ15173 497 aa15.33■□□□□ 0.04
SGCA-201ENST00000262018 MYOCDQ8IZQ8 938 aa15.33■□□□□ 0.04
SGCA-201ENST00000262018 ZNF274Q96GC6 653 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms