RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 RAPH1Q70E73 1250 aa13.25□□□□□ -0.29
SPG11-201ENST00000261866 VSIG1Q86XK7 387 aa13.25□□□□□ -0.29
SPG11-201ENST00000261866 GOLGA5Q8TBA6 731 aa13.25□□□□□ -0.29
SPG11-201ENST00000261866 MCUR1Q96AQ8 359 aa13.25□□□□□ -0.29
SPG11-201ENST00000261866 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.25□□□□□ -0.29
SPG11-201ENST00000261866 RNF8O76064 485 aa13.25□□□□□ -0.29
SPG11-201ENST00000261866 LARGE1O95461 756 aa13.25□□□□□ -0.29
SPG11-201ENST00000261866 FOSP01100 380 aaPredicted RBP13.25□□□□□ -0.29
SPG11-201ENST00000261866 ZNF18P17022 549 aa13.25□□□□□ -0.29
SPG11-201ENST00000261866 OR6B2Q6IFH4 312 aa13.25□□□□□ -0.29
SPG11-201ENST00000261866 FAM186BQ8IYM0 893 aa13.25□□□□□ -0.29
SPG11-201ENST00000261866 SFMBT1Q9UHJ3 866 aa13.25□□□□□ -0.29
SPG11-201ENST00000261866 SAR1BQ9Y6B6 198 aa13.25□□□□□ -0.29
SPG11-201ENST00000261866 POC1B-GALNT4F8VUJ3 575 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 PSAPP07602 524 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 SNRNP48Q6IEG0 339 aaKnown RBP13.24□□□□□ -0.29
SPG11-201ENST00000261866 DDX27Q96GQ7 796 aaKnown RBP13.24□□□□□ -0.29
SPG11-201ENST00000261866 MOSPD1Q9UJG1 213 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 ACTN1P12814 892 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 CMA1P23946 247 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 CXCR5P32302 372 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 ATP1A2P50993 1020 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 PEX3P56589 373 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 YWHAGP61981 247 aaKnown RBP eCLIP13.24□□□□□ -0.29
SPG11-201ENST00000261866 SEPT2Q15019 361 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 GPT2Q8TD30 523 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 MAP4K1Q92918 833 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 MXD3Q9BW11 206 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 SH2B2O14492 632 aaPredicted RBP13.24□□□□□ -0.29
SPG11-201ENST00000261866 LGSNQ5TDP6 509 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 COA1Q9GZY4 146 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 ERO1AQ96HE7 468 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 NUF2Q9BZD4 464 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 TMEM260Q9NX78 707 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 ZMYND10O75800 440 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 PSMC2P35998 433 aaKnown RBP13.24□□□□□ -0.29
SPG11-201ENST00000261866 TUBGCP2Q9BSJ2 902 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 OLA1Q9NTK5 396 aaKnown RBP13.24□□□□□ -0.29
SPG11-201ENST00000261866 KCNG1Q9UIX4 513 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 NEDD4P46934 1319 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 N4BP1O75113 896 aaKnown RBP13.24□□□□□ -0.29
SPG11-201ENST00000261866 RPS6KA4O75676 772 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 COPB1P53618 953 aaKnown RBP13.24□□□□□ -0.29
SPG11-201ENST00000261866 RIC8AQ9NPQ8 531 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 MINPP1Q9UNW1 487 aa13.24□□□□□ -0.29
SPG11-201ENST00000261866 KDM5CP41229 1560 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 PAK2Q13177 524 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 GALNT17Q6IS24 598 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 GDAP1Q8TB36 358 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 CCDC68Q9H2F9 335 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 IMPACTQ9P2X3 320 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 ANAPC5Q9UJX4 755 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 COL15A1P39059 1388 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 USP17L15C9J2P7 530 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 USP17L13C9JLJ4 530 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 USP17L11C9JVI0 530 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 USP17L18D6R9N7 530 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 USP17L22D6RA61 530 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 USP17L17D6RBQ6 530 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 USP17L19D6RCP7 530 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 USP17L20D6RJB6 530 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 TUBB4AP04350 444 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 USP17L24Q0WX57 530 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 RINT1Q6NUQ1 792 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 CCDC62Q6P9F0 684 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 USP17L6PQ6QN14 398 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 PPP4R1Q8TF05 950 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 HDAC11Q96DB2 347 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 TRIM56Q9BRZ2 755 aaKnown RBP13.23□□□□□ -0.29
SPG11-201ENST00000261866 DHX36Q9H2U1 1008 aaKnown RBP13.23□□□□□ -0.29
SPG11-201ENST00000261866 H0YCG3 227 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 NSUN7Q8NE18 718 aaKnown RBP13.23□□□□□ -0.29
SPG11-201ENST00000261866 HSPH1Q92598 858 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 NUCKS1Q9H1E3 243 aaKnown RBP13.23□□□□□ -0.29
SPG11-201ENST00000261866 EFCC1Q9HA90 598 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 SMAD1Q15797 465 aaKnown RBP13.23□□□□□ -0.29
SPG11-201ENST00000261866 SLC27A3Q5K4L6 730 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 ERBB4Q15303 1308 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 TYW5A2RUC4 315 aaKnown RBP13.23□□□□□ -0.29
SPG11-201ENST00000261866 PLCG1P19174 1290 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 PTPREP23469 700 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 ZWILCHQ9H900 591 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 NRBP1Q9UHY1 535 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 CD2BP2O95400 341 aaKnown RBP13.23□□□□□ -0.29
SPG11-201ENST00000261866 ATF2P15336 505 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 PCK1P35558 622 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 RBL2Q08999 1139 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 ERCC6LQ2NKX8 1250 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 CEP128Q6ZU80 1094 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 MSTO1Q9BUK6 570 aa13.23□□□□□ -0.29
SPG11-201ENST00000261866 ERVV-1B6SEH8 477 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 USP17L10C9JJH3 530 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 OR6B3Q8NGW1 331 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 PPP2R2CQ9Y2T4 447 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 KDM6BO15054 1643 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 PLA2G4BP0C869 781 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 CASP1P29466 404 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 STX2P32856 288 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 RWDD4Q6NW29 188 aaKnown RBP13.22□□□□□ -0.29
SPG11-201ENST00000261866 ELP3Q9H9T3 547 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms