RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 AARSP49588 968 aaKnown RBP eCLIP12.83□□□□□ -0.36
VRTN-201ENST00000256362 CACNB1Q02641 598 aaPredicted RBP12.83□□□□□ -0.36
VRTN-201ENST00000256362 GRIK5Q16478 980 aa12.83□□□□□ -0.36
VRTN-201ENST00000256362 SLC35G1Q2M3R5 365 aa12.83□□□□□ -0.36
VRTN-201ENST00000256362 CLEC10AQ8IUN9 316 aa12.83□□□□□ -0.36
VRTN-201ENST00000256362 TRIM58Q8NG06 486 aa12.83□□□□□ -0.36
VRTN-201ENST00000256362 DUSP9Q99956 384 aaKnown RBP12.83□□□□□ -0.36
VRTN-201ENST00000256362 ANKIB1Q9P2G1 1089 aa12.83□□□□□ -0.36
VRTN-201ENST00000256362 LRP6O75581 1613 aa12.83□□□□□ -0.36
VRTN-201ENST00000256362 DDX60Q8IY21 1712 aaKnown RBP12.82□□□□□ -0.36
VRTN-201ENST00000256362 KCNK3O14649 394 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 GLI1P08151 1106 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 RAPGEF1Q13905 1077 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 FAM182BQ5T319 152 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 SWT1Q5T5J6 900 aaKnown RBP12.82□□□□□ -0.36
VRTN-201ENST00000256362 CCDC170Q8IYT3 715 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 ZNF444Q8N0Y2 327 aaPredicted RBP12.82□□□□□ -0.36
VRTN-201ENST00000256362 CAPN11Q9UMQ6 739 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 MYH10P35580 1976 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 PSMD14O00487 310 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 ZNF263O14978 683 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 CALML3P27482 149 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 PPP2R5BQ15173 497 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 DDB1Q16531 1140 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 CFAP221Q4G0U5 840 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 TTI2Q6NXR4 508 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 C4orf32Q8N8J7 132 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 MYCBPAPQ8TBZ2 947 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 RPGRIP1Q96KN7 1286 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 SNX12Q9UMY4 172 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 L3MBTL1Q9Y468 752 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 PCDHA13Q9Y5I0 950 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 FRMPD2Q68DX3 1309 aaPredicted RBP12.82□□□□□ -0.36
VRTN-201ENST00000256362 MYH3P11055 1940 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 NUP98P52948 1817 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 RASSF10A6NK89 507 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 KLRC4O43908 158 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 SLCO1A2P46721 670 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 DNM2P50570 870 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 KIF11P52732 1056 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 MKRN4PQ13434 485 aaPredicted RBP12.82□□□□□ -0.36
VRTN-201ENST00000256362 MEX3CQ5U5Q3 659 aaKnown RBP12.82□□□□□ -0.36
VRTN-201ENST00000256362 P2RX5Q93086 422 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 MLXIPLQ9NP71 852 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 KCNG1Q9UIX4 513 aa12.82□□□□□ -0.36
VRTN-201ENST00000256362 KLRF2D3W0D1 207 aa12.81□□□□□ -0.36
VRTN-201ENST00000256362 MAP2K1Q02750 393 aaPredicted RBP12.81□□□□□ -0.36
VRTN-201ENST00000256362 NBPF9Q3BBW0 867 aa12.81□□□□□ -0.36
VRTN-201ENST00000256362 PARP10Q53GL7 1025 aa12.81□□□□□ -0.36
VRTN-201ENST00000256362 CYB5D1Q6P9G0 228 aa12.81□□□□□ -0.36
VRTN-201ENST00000256362 CDK5RAP3Q96JB5 506 aa12.81□□□□□ -0.36
VRTN-201ENST00000256362 EPN3Q9H201 632 aa12.81□□□□□ -0.36
VRTN-201ENST00000256362 NID2Q14112 1375 aa12.81□□□□□ -0.36
VRTN-201ENST00000256362 POTEMA6NI47 508 aa12.81□□□□□ -0.36
VRTN-201ENST00000256362 CALRP27797 417 aaKnown RBP12.81□□□□□ -0.36
VRTN-201ENST00000256362 CCDC25Q86WR0 208 aa12.81□□□□□ -0.36
VRTN-201ENST00000256362 DNAJC7Q99615 494 aa12.81□□□□□ -0.36
VRTN-201ENST00000256362 GRIN2DO15399 1336 aa12.81□□□□□ -0.36
VRTN-201ENST00000256362 SMCO2A6NFE2 343 aa12.81□□□□□ -0.36
VRTN-201ENST00000256362 PTGISQ16647 500 aa12.81□□□□□ -0.36
VRTN-201ENST00000256362 TBC1D9BQ66K14 1250 aa12.81□□□□□ -0.36
VRTN-201ENST00000256362 ZNF507Q8TCN5 953 aa12.81□□□□□ -0.36
VRTN-201ENST00000256362 CYFIP2Q96F07 1278 aa12.81□□□□□ -0.36
VRTN-201ENST00000256362 NOX5Q96PH1 765 aa12.81□□□□□ -0.36
VRTN-201ENST00000256362 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.81□□□□□ -0.36
VRTN-201ENST00000256362 SHANK3Q9BYB0 1731 aa12.8□□□□□ -0.36
VRTN-201ENST00000256362 PDS5AQ29RF7 1337 aaKnown RBP12.8□□□□□ -0.36
VRTN-201ENST00000256362 RCAN1P53805 252 aa12.8□□□□□ -0.36
VRTN-201ENST00000256362 PAPPAQ13219 1627 aa12.8□□□□□ -0.36
VRTN-201ENST00000256362 CTNND1O60716 968 aaKnown RBP12.8□□□□□ -0.36
VRTN-201ENST00000256362 CPP00450 1065 aa12.8□□□□□ -0.36
VRTN-201ENST00000256362 EEF1GP26641 437 aaKnown RBP12.8□□□□□ -0.36
VRTN-201ENST00000256362 MDH1P40925 334 aaKnown RBP12.8□□□□□ -0.36
VRTN-201ENST00000256362 RPS8P62241 208 aaKnown RBP12.8□□□□□ -0.36
VRTN-201ENST00000256362 UBE4AQ14139 1066 aa12.8□□□□□ -0.36
VRTN-201ENST00000256362 PTF1AQ7RTS3 328 aa12.8□□□□□ -0.36
VRTN-201ENST00000256362 NBPF5PQ86XG9 351 aaPredicted RBP12.8□□□□□ -0.36
VRTN-201ENST00000256362 NELFCDQ8IXH7 590 aa12.8□□□□□ -0.36
VRTN-201ENST00000256362 COA7Q96BR5 231 aa12.8□□□□□ -0.36
VRTN-201ENST00000256362 TRIM9Q9C026 710 aa12.8□□□□□ -0.36
VRTN-201ENST00000256362 KIF9Q9HAQ2 790 aa12.8□□□□□ -0.36
VRTN-201ENST00000256362 SRGNP10124 158 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 SLC1A4P43007 532 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 MAGOHP61326 146 aaKnown RBP12.79□□□□□ -0.36
VRTN-201ENST00000256362 ACCSLQ4AC99 568 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 GKAP1Q5VSY0 366 aaPredicted RBP12.79□□□□□ -0.36
VRTN-201ENST00000256362 GIMAP8Q8ND71 665 aaPredicted RBP12.79□□□□□ -0.36
VRTN-201ENST00000256362 TBCKQ8TEA7 893 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 MAGOHBQ96A72 148 aaKnown RBP12.79□□□□□ -0.36
VRTN-201ENST00000256362 MIEF2Q96C03 454 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 ZBTB10Q96DT7 871 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 TPX2Q9ULW0 747 aaKnown RBP12.79□□□□□ -0.36
VRTN-201ENST00000256362 CICQ96RK0 1608 aaPredicted RBP12.79□□□□□ -0.36
VRTN-201ENST00000256362 LRRC53A6NM62 1247 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 TCP1P17987 556 aaKnown RBP12.79□□□□□ -0.36
VRTN-201ENST00000256362 TRAPPC10P48553 1259 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 ARFGAP2Q8N6H7 521 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 AENQ8WTP8 325 aaKnown RBP12.79□□□□□ -0.36
VRTN-201ENST00000256362 HVCN1Q96D96 273 aa12.79□□□□□ -0.36
VRTN-201ENST00000256362 STAMBPL1Q96FJ0 436 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms