RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 MYH6P13533 1939 aa16.37■□□□□ 0.21
GPN3-201ENST00000228827 FGBP02675 491 aa16.36■□□□□ 0.21
GPN3-201ENST00000228827 APOBRQ0VD83 1088 aa16.36■□□□□ 0.21
GPN3-201ENST00000228827 MFSD10Q14728 455 aa16.36■□□□□ 0.21
GPN3-201ENST00000228827 PTGISQ16647 500 aa16.36■□□□□ 0.21
GPN3-201ENST00000228827 WWC2Q6AWC2 1192 aa16.36■□□□□ 0.21
GPN3-201ENST00000228827 GDF6Q6KF10 455 aaPredicted RBP16.36■□□□□ 0.21
GPN3-201ENST00000228827 Q6ZUG5 572 aa16.36■□□□□ 0.21
GPN3-201ENST00000228827 INPP4AQ96PE3 977 aaPredicted RBP16.36■□□□□ 0.21
GPN3-201ENST00000228827 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.35■□□□□ 0.21
GPN3-201ENST00000228827 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.35■□□□□ 0.21
GPN3-201ENST00000228827 REC8O95072 547 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 TGFB3P10600 412 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 CDC27P30260 824 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 SEMA3FQ13275 785 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 KIAA0753Q2KHM9 967 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 PCNX4Q63HM2 1172 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 BLOC1S2Q6QNY1 142 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 OTOP2Q7RTS6 562 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 DEFB128Q7Z7B8 93 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 C7orf31Q8N865 590 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 BRF1Q92994 677 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 GUCD1Q96NT3 240 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 CXXC1Q9P0U4 656 aaPredicted RBP16.35■□□□□ 0.21
GPN3-201ENST00000228827 V9GY48 417 aaPredicted RBP16.35■□□□□ 0.21
GPN3-201ENST00000228827 GRXCR1A8MXD5 290 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 SPATA31C2B4DYI2 1134 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 FIBPO43427 364 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 STAM2O75886 525 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 METAP2P50579 478 aaKnown RBP eCLIP16.35■□□□□ 0.21
GPN3-201ENST00000228827 NAPAP54920 295 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 FUT2Q10981 343 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 CYFIP1Q7L576 1253 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 RPUSD2Q8IZ73 545 aaKnown RBP16.35■□□□□ 0.21
GPN3-201ENST00000228827 RETREG2Q8NC44 543 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 KATNAL1Q9BW62 490 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 TTYH1Q9H313 450 aaPredicted RBP16.35■□□□□ 0.21
GPN3-201ENST00000228827 SEMA6BQ9H3T3 888 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 FAM217BQ9NTX9 383 aaPredicted RBP16.35■□□□□ 0.21
GPN3-201ENST00000228827 PPP4R2Q9NY27 417 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 HDAC6Q9UBN7 1215 aa16.35■□□□□ 0.21
GPN3-201ENST00000228827 PPFIA4O75335 1185 aa16.34■□□□□ 0.21
GPN3-201ENST00000228827 F2P00734 622 aa16.34■□□□□ 0.21
GPN3-201ENST00000228827 HOXD8P13378 290 aaPredicted RBP16.34■□□□□ 0.21
GPN3-201ENST00000228827 RPS6KB1P23443 525 aa16.34■□□□□ 0.21
GPN3-201ENST00000228827 ICAM3P32942 547 aa16.34■□□□□ 0.21
GPN3-201ENST00000228827 ADD1P35611 737 aaKnown RBP16.34■□□□□ 0.21
GPN3-201ENST00000228827 SP4Q02446 784 aa16.34■□□□□ 0.21
GPN3-201ENST00000228827 RASIP1Q5U651 963 aa16.34■□□□□ 0.21
GPN3-201ENST00000228827 TYW1BQ6NUM6 668 aa16.34■□□□□ 0.21
GPN3-201ENST00000228827 SESTD1Q86VW0 696 aa16.34■□□□□ 0.21
GPN3-201ENST00000228827 HERVK_113Q902F9 699 aa16.34■□□□□ 0.21
GPN3-201ENST00000228827 VWCEQ96DN2 955 aa16.34■□□□□ 0.21
GPN3-201ENST00000228827 GTF2IRD1Q9UHL9 959 aa16.34■□□□□ 0.21
GPN3-201ENST00000228827 PCDHA6Q9UN73 950 aa16.34■□□□□ 0.21
GPN3-201ENST00000228827 STXBP5LQ9Y2K9 1186 aa16.34■□□□□ 0.21
GPN3-201ENST00000228827 PCDHA8Q9Y5H6 950 aa16.34■□□□□ 0.21
GPN3-201ENST00000228827 BAZ2BQ9UIF8 2168 aaKnown RBP16.34■□□□□ 0.21
GPN3-201ENST00000228827 SPDYE3A6NKU9 549 aa16.33■□□□□ 0.2
GPN3-201ENST00000228827 ZBBXA8MT70 800 aa16.33■□□□□ 0.2
GPN3-201ENST00000228827 HAS3O00219 553 aa16.33■□□□□ 0.2
GPN3-201ENST00000228827 NOP56O00567 594 aaKnown RBP16.33■□□□□ 0.2
GPN3-201ENST00000228827 DNAJB2P25686 324 aa16.33■□□□□ 0.2
GPN3-201ENST00000228827 PBX2P40425 430 aa16.33■□□□□ 0.2
GPN3-201ENST00000228827 ZNF200P98182 395 aaPredicted RBP16.33■□□□□ 0.2
GPN3-201ENST00000228827 BFSP2Q13515 415 aa16.33■□□□□ 0.2
GPN3-201ENST00000228827 NEDD9Q14511 834 aa16.33■□□□□ 0.2
GPN3-201ENST00000228827 XRRA1Q6P2D8 792 aa16.33■□□□□ 0.2
GPN3-201ENST00000228827 NLRX1Q86UT6 975 aa16.33■□□□□ 0.2
GPN3-201ENST00000228827 PGBD1Q96JS3 809 aa16.33■□□□□ 0.2
GPN3-201ENST00000228827 CTAGE1Q96RT6 745 aa16.33■□□□□ 0.2
GPN3-201ENST00000228827 MTIF3Q9H2K0 278 aaKnown RBP16.33■□□□□ 0.2
GPN3-201ENST00000228827 TELO2Q9Y4R8 837 aa16.33■□□□□ 0.2
GPN3-201ENST00000228827 LAMA2P24043 3122 aaKnown RBP16.33■□□□□ 0.2
GPN3-201ENST00000228827 STXBP3O00186 592 aa16.32■□□□□ 0.2
GPN3-201ENST00000228827 PITPNM1O00562 1244 aa16.32■□□□□ 0.2
GPN3-201ENST00000228827 IQCF3P0C7M6 154 aa16.32■□□□□ 0.2
GPN3-201ENST00000228827 PSMA5P28066 241 aa16.32■□□□□ 0.2
GPN3-201ENST00000228827 METTL7BQ6UX53 244 aa16.32■□□□□ 0.2
GPN3-201ENST00000228827 CCDC155Q8N6L0 562 aa16.32■□□□□ 0.2
GPN3-201ENST00000228827 DHX38Q92620 1227 aaKnown RBP16.32■□□□□ 0.2
GPN3-201ENST00000228827 CDX2Q99626 313 aaPredicted RBP16.32■□□□□ 0.2
GPN3-201ENST00000228827 C16orf70Q9BSU1 422 aa16.32■□□□□ 0.2
GPN3-201ENST00000228827 PBX4Q9BYU1 374 aa16.32■□□□□ 0.2
GPN3-201ENST00000228827 PKD2L1Q9P0L9 805 aa16.32■□□□□ 0.2
GPN3-201ENST00000228827 RBAK-RBAKDNI3L0D1 243 aa16.31■□□□□ 0.2
GPN3-201ENST00000228827 PPFIA3O75145 1194 aa16.31■□□□□ 0.2
GPN3-201ENST00000228827 LGALS2P05162 132 aa16.31■□□□□ 0.2
GPN3-201ENST00000228827 RCAN1P53805 252 aa16.31■□□□□ 0.2
GPN3-201ENST00000228827 UTP14CQ5TAP6 766 aaKnown RBP16.31■□□□□ 0.2
GPN3-201ENST00000228827 TIFAQ96CG3 184 aa16.31■□□□□ 0.2
GPN3-201ENST00000228827 GPR20Q99678 358 aa16.31■□□□□ 0.2
GPN3-201ENST00000228827 FTOQ9C0B1 505 aaKnown RBP eCLIP16.31■□□□□ 0.2
GPN3-201ENST00000228827 RIC8AQ9NPQ8 531 aa16.31■□□□□ 0.2
GPN3-201ENST00000228827 SCN10AQ9Y5Y9 1956 aa16.31■□□□□ 0.2
GPN3-201ENST00000228827 KIAA1217Q5T5P2 1943 aa16.31■□□□□ 0.2
GPN3-201ENST00000228827 SMCO2A6NFE2 343 aa16.3■□□□□ 0.2
GPN3-201ENST00000228827 ITGB5P18084 799 aa16.3■□□□□ 0.2
GPN3-201ENST00000228827 ADCY7P51828 1080 aa16.3■□□□□ 0.2
GPN3-201ENST00000228827 HIC1Q14526 733 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms