RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 SAMD7Q7Z3H4 446 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 RETREG2Q8NC44 543 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 PPP1R14CQ8TAE6 165 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 ACTR5Q9H9F9 607 aaPredicted RBP12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 PLCB1Q9NQ66 1216 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 TRIM10Q9UDY6 481 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 SCG2P13521 617 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 ATP5DP30049 168 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 IRAK1P51617 712 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 KIF11P52732 1056 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 TRIM28Q13263 835 aaKnown RBP12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 TBC1D1Q86TI0 1168 aaPredicted RBP12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 AMIGO3Q86WK7 504 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 RNF10Q8N5U6 811 aaKnown RBP12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 U2AF1L4Q8WU68 220 aaKnown RBP12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 FAM212AQ96EL1 285 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 SMC6Q96SB8 1091 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 RNF26Q9BY78 433 aaPredicted RBP12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 GPR108Q9NPR9 543 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 AMFRQ9UKV5 643 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 EXOSC10Q01780 885 aaKnown RBP12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 GUCY1A3Q02108 690 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 ST3GAL1Q11201 340 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 UBE3CQ15386 1083 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 KRT26Q7Z3Y9 468 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 MICALL2Q8IY33 904 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 TRIM6Q9C030 488 aaPredicted RBP12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 COA1Q9GZY4 146 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 TUBE1Q9UJT0 475 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 SALL3Q9BXA9 1300 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 LMNB1P20700 586 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 CDC27P30260 824 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 DHX9Q08211 1270 aaKnown RBP12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 CROCCP2Q86T23 111 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 P2RX5Q93086 422 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 KLHL29Q96CT2 875 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 CRAMP1Q96RY5 1269 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 ZSCAN10Q96SZ4 725 aaPredicted RBP12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 CNOT7Q9UIV1 285 aaKnown RBP12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 ZNRF3Q9ULT6 936 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 L1RE1Q9UN81 338 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 PCDHA13Q9Y5I0 950 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 CUL4BQ13620 913 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 RASGRF1Q13972 1273 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 ZKSCAN8Q15776 578 aaPredicted RBP12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 CUL5Q93034 780 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 KLHL14Q9P2G3 628 aa12.63□□□□□ -0.39
DNMT3B-201ENST00000201963 ATP2A1O14983 1001 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 ZNF185O15231 689 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 PRKAB2O43741 272 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 EPB41P11171 864 aaKnown RBP12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 LONP1P36776 959 aaKnown RBP12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 TGFB2P61812 414 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 SMCR8Q8TEV9 937 aaPredicted RBP12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 MLXIPQ9HAP2 919 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 KNDC1Q76NI1 1749 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 FAM196BA6NMK8 535 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 CCDC169A6NNP5 214 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 SEMA3EO15041 775 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 FDPSP14324 419 aaKnown RBP12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 SESN3P58005 492 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 DYNLL1P63167 89 aaKnown RBP12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 NFRKBQ6P4R8 1299 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 LRRC31Q6UY01 552 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 SYCE1Q8N0S2 351 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 CSRNP1Q96S65 589 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 PLAAQ9Y263 795 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 NFAT5O94916 1531 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 HMGB1P1B2RPK0 211 aaPredicted RBP12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 FAM13AO94988 1023 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 H2AFZP0C0S5 128 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 TFAP4Q01664 338 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 RBBP5Q15291 538 aaKnown RBP12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 H2AFVQ71UI9 128 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 OXER1Q8TDS5 423 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 STAG1Q8WVM7 1258 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 MCUR1Q96AQ8 359 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 BACH1O14867 736 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 MEFVO15553 781 aaPredicted RBP12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 ADD2P35612 726 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 CCDC174Q6PII3 467 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 USP49Q70CQ1 688 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 KRT25Q7Z3Z0 450 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 MYOCDQ8IZQ8 938 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 HNRNPLLQ8WVV9 542 aaKnown RBP12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 DDX12PQ92771 950 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 VCXQ9H320 206 aa12.62□□□□□ -0.39
DNMT3B-201ENST00000201963 KIF20BQ96Q89 1820 aa12.61□□□□□ -0.39
DNMT3B-201ENST00000201963 A0A1B0GTH6 734 aa12.61□□□□□ -0.39
DNMT3B-201ENST00000201963 VPS41P49754 854 aa12.61□□□□□ -0.39
DNMT3B-201ENST00000201963 GMPSP49915 693 aaPredicted RBP12.61□□□□□ -0.39
DNMT3B-201ENST00000201963 CALCRLQ16602 461 aa12.61□□□□□ -0.39
DNMT3B-201ENST00000201963 CYB5R4Q7L1T6 521 aa12.61□□□□□ -0.39
DNMT3B-201ENST00000201963 PODNQ7Z5L7 613 aa12.61□□□□□ -0.39
DNMT3B-201ENST00000201963 MB21D2Q8IYB1 491 aaPredicted RBP12.61□□□□□ -0.39
DNMT3B-201ENST00000201963 UBL4BQ8N7F7 174 aa12.61□□□□□ -0.39
DNMT3B-201ENST00000201963 LRRC1Q9BTT6 524 aa12.61□□□□□ -0.39
DNMT3B-201ENST00000201963 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.61□□□□□ -0.39
DNMT3B-201ENST00000201963 KLC4Q9NSK0 619 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms