RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 HSDL1Q3SXM5 330 aa18.39■□□□□ 0.53
ERCC1-201ENST00000013807 TMEM67Q5HYA8 995 aa18.39■□□□□ 0.53
ERCC1-201ENST00000013807 IL31RAQ8NI17 732 aa18.39■□□□□ 0.53
ERCC1-201ENST00000013807 ATXN2LQ8WWM7 1075 aaKnown RBP18.39■□□□□ 0.53
ERCC1-201ENST00000013807 SPZ1Q9BXG8 430 aa18.39■□□□□ 0.53
ERCC1-201ENST00000013807 HDAC6Q9UBN7 1215 aa18.39■□□□□ 0.53
ERCC1-201ENST00000013807 MYCLP12524 364 aaPredicted RBP18.38■□□□□ 0.53
ERCC1-201ENST00000013807 MYOGP15173 224 aa18.38■□□□□ 0.53
ERCC1-201ENST00000013807 SELPP16109 830 aa18.38■□□□□ 0.53
ERCC1-201ENST00000013807 CCND2P30279 289 aa18.38■□□□□ 0.53
ERCC1-201ENST00000013807 HOXC8P31273 242 aa18.38■□□□□ 0.53
ERCC1-201ENST00000013807 ICAM3P32942 547 aa18.38■□□□□ 0.53
ERCC1-201ENST00000013807 PTK7Q13308 1070 aa18.38■□□□□ 0.53
ERCC1-201ENST00000013807 MFSD10Q14728 455 aa18.38■□□□□ 0.53
ERCC1-201ENST00000013807 TJAP1Q5JTD0 557 aa18.38■□□□□ 0.53
ERCC1-201ENST00000013807 PPP2R2DQ66LE6 453 aa18.38■□□□□ 0.53
ERCC1-201ENST00000013807 HOMER1Q86YM7 354 aa18.38■□□□□ 0.53
ERCC1-201ENST00000013807 TMTC2Q8N394 836 aa18.38■□□□□ 0.53
ERCC1-201ENST00000013807 C7orf31Q8N865 590 aa18.38■□□□□ 0.53
ERCC1-201ENST00000013807 INPP4AQ96PE3 977 aaPredicted RBP18.38■□□□□ 0.53
ERCC1-201ENST00000013807 C16orf70Q9BSU1 422 aa18.38■□□□□ 0.53
ERCC1-201ENST00000013807 LY9Q9HBG7 655 aa18.38■□□□□ 0.53
ERCC1-201ENST00000013807 RBM8AQ9Y5S9 174 aaKnown RBP18.38■□□□□ 0.53
ERCC1-201ENST00000013807 MICAL3Q7RTP6 2002 aa18.38■□□□□ 0.53
ERCC1-201ENST00000013807 PIK3CDO00329 1044 aa18.37■□□□□ 0.53
ERCC1-201ENST00000013807 CKBP12277 381 aa18.37■□□□□ 0.53
ERCC1-201ENST00000013807 UBA1P22314 1058 aaKnown RBP18.37■□□□□ 0.53
ERCC1-201ENST00000013807 KIAA0753Q2KHM9 967 aa18.37■□□□□ 0.53
ERCC1-201ENST00000013807 TRIM71Q2Q1W2 868 aaKnown RBP18.37■□□□□ 0.53
ERCC1-201ENST00000013807 TRAF7Q6Q0C0 670 aa18.37■□□□□ 0.53
ERCC1-201ENST00000013807 LRRC8DQ7L1W4 858 aa18.37■□□□□ 0.53
ERCC1-201ENST00000013807 HERC6Q8IVU3 1022 aa18.37■□□□□ 0.53
ERCC1-201ENST00000013807 LZTS2Q9BRK4 669 aa18.37■□□□□ 0.53
ERCC1-201ENST00000013807 DDAH1O94760 285 aa18.36■□□□□ 0.53
ERCC1-201ENST00000013807 GGPS1O95749 300 aa18.36■□□□□ 0.53
ERCC1-201ENST00000013807 MRPS9P82933 396 aaKnown RBP18.36■□□□□ 0.53
ERCC1-201ENST00000013807 TMEM87BQ96K49 555 aa18.36■□□□□ 0.53
ERCC1-201ENST00000013807 SPATA33Q96N06 139 aa18.36■□□□□ 0.53
ERCC1-201ENST00000013807 FTOQ9C0B1 505 aaKnown RBP eCLIP18.36■□□□□ 0.53
ERCC1-201ENST00000013807 LSG1Q9H089 658 aaKnown RBP18.36■□□□□ 0.53
ERCC1-201ENST00000013807 BRWD1Q9NSI6 2320 aa18.35■□□□□ 0.53
ERCC1-201ENST00000013807 ABHD14A-ACY1A0A1B0GW23 586 aa18.35■□□□□ 0.53
ERCC1-201ENST00000013807 SPATA31C2B4DYI2 1134 aa18.35■□□□□ 0.53
ERCC1-201ENST00000013807 NBNO60934 754 aa18.35■□□□□ 0.53
ERCC1-201ENST00000013807 CA3P07451 260 aa18.35■□□□□ 0.53
ERCC1-201ENST00000013807 ZNF286BP0CG31 522 aa18.35■□□□□ 0.53
ERCC1-201ENST00000013807 KIF5BP33176 963 aa18.35■□□□□ 0.53
ERCC1-201ENST00000013807 LIFRP42702 1097 aa18.35■□□□□ 0.53
ERCC1-201ENST00000013807 NECTIN1Q15223 517 aa18.35■□□□□ 0.53
ERCC1-201ENST00000013807 XRRA1Q6P2D8 792 aa18.35■□□□□ 0.53
ERCC1-201ENST00000013807 CNKSR3Q6P9H4 555 aa18.35■□□□□ 0.53
ERCC1-201ENST00000013807 FCHSD1Q86WN1 690 aa18.35■□□□□ 0.53
ERCC1-201ENST00000013807 ZNF654Q8IZM8 581 aa18.35■□□□□ 0.53
ERCC1-201ENST00000013807 KIF28PB7ZC32 967 aa18.34■□□□□ 0.53
ERCC1-201ENST00000013807 MEIS2O14770 477 aa18.34■□□□□ 0.53
ERCC1-201ENST00000013807 EFCAB14O75071 495 aa18.34■□□□□ 0.53
ERCC1-201ENST00000013807 IGFBP4P22692 258 aa18.34■□□□□ 0.53
ERCC1-201ENST00000013807 MCM5P33992 734 aa18.34■□□□□ 0.53
ERCC1-201ENST00000013807 GNAQP50148 359 aa18.34■□□□□ 0.53
ERCC1-201ENST00000013807 CHMP4BP1P59074 171 aa18.34■□□□□ 0.53
ERCC1-201ENST00000013807 TAP1Q03518 808 aa18.34■□□□□ 0.53
ERCC1-201ENST00000013807 HIC1Q14526 733 aa18.34■□□□□ 0.53
ERCC1-201ENST00000013807 GNPTABQ3T906 1256 aa18.34■□□□□ 0.53
ERCC1-201ENST00000013807 SERINC5Q86VE9 423 aa18.34■□□□□ 0.53
ERCC1-201ENST00000013807 CTCFLQ8NI51 663 aaPredicted RBP18.34■□□□□ 0.53
ERCC1-201ENST00000013807 GPKOWQ92917 476 aaPredicted RBP eCLIP18.34■□□□□ 0.53
ERCC1-201ENST00000013807 SENP7Q9BQF6 1050 aa18.34■□□□□ 0.53
ERCC1-201ENST00000013807 ALG1Q9BT22 464 aa18.34■□□□□ 0.53
ERCC1-201ENST00000013807 USP26Q9BXU7 913 aa18.34■□□□□ 0.53
ERCC1-201ENST00000013807 PRDM6Q9NQX0 595 aa18.34■□□□□ 0.53
ERCC1-201ENST00000013807 XIRP2A4UGR9 3374 aa18.33■□□□□ 0.53
ERCC1-201ENST00000013807 H3BRB1 525 aa18.33■□□□□ 0.52
ERCC1-201ENST00000013807 WDR5P61964 334 aaKnown RBP18.33■□□□□ 0.52
ERCC1-201ENST00000013807 SEMA3FQ13275 785 aa18.33■□□□□ 0.52
ERCC1-201ENST00000013807 NEDD9Q14511 834 aa18.33■□□□□ 0.52
ERCC1-201ENST00000013807 PCNX4Q63HM2 1172 aa18.33■□□□□ 0.52
ERCC1-201ENST00000013807 CASC1Q6TDU7 716 aa18.33■□□□□ 0.52
ERCC1-201ENST00000013807 METTL7BQ6UX53 244 aa18.33■□□□□ 0.52
ERCC1-201ENST00000013807 WNT8BQ93098 351 aa18.33■□□□□ 0.52
ERCC1-201ENST00000013807 RRP36Q96EU6 259 aaKnown RBP18.33■□□□□ 0.52
ERCC1-201ENST00000013807 ASB2Q96Q27 587 aa18.33■□□□□ 0.52
ERCC1-201ENST00000013807 TUT1Q9H6E5 874 aaKnown RBP18.33■□□□□ 0.52
ERCC1-201ENST00000013807 MLXIPQ9HAP2 919 aa18.33■□□□□ 0.52
ERCC1-201ENST00000013807 THEGQ9P2T0 379 aa18.33■□□□□ 0.52
ERCC1-201ENST00000013807 SIP14410 1827 aa18.33■□□□□ 0.52
ERCC1-201ENST00000013807 EMSYQ7Z589 1322 aa18.32■□□□□ 0.52
ERCC1-201ENST00000013807 SH2B2O14492 632 aaPredicted RBP18.32■□□□□ 0.52
ERCC1-201ENST00000013807 FIBPO43427 364 aa18.32■□□□□ 0.52
ERCC1-201ENST00000013807 PRC1O43663 620 aa18.32■□□□□ 0.52
ERCC1-201ENST00000013807 CALM1P0DP23 149 aa18.32■□□□□ 0.52
ERCC1-201ENST00000013807 CALM2P0DP24 149 aa18.32■□□□□ 0.52
ERCC1-201ENST00000013807 CALM3P0DP25 149 aa18.32■□□□□ 0.52
ERCC1-201ENST00000013807 KCNJ6P48051 423 aa18.32■□□□□ 0.52
ERCC1-201ENST00000013807 IRX6P78412 446 aaPredicted RBP18.32■□□□□ 0.52
ERCC1-201ENST00000013807 MKRN4PQ13434 485 aaPredicted RBP18.32■□□□□ 0.52
ERCC1-201ENST00000013807 MBTPS1Q14703 1052 aa18.32■□□□□ 0.52
ERCC1-201ENST00000013807 ZNF618Q5T7W0 954 aa18.32■□□□□ 0.52
ERCC1-201ENST00000013807 SRBD1Q8N5C6 995 aaKnown RBP18.32■□□□□ 0.52
ERCC1-201ENST00000013807 ESYT1Q9BSJ8 1104 aa18.32■□□□□ 0.52
ERCC1-201ENST00000013807 BCAS3Q9H6U6 928 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms