RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Gm5622Q810Q0 167 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Hps6Q8BLY7 805 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Cep95Q8BVV7 827 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Cd248Q91V98 765 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Tmem191cQ9JJB1 302 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 PigoQ9JJI6 1093 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Lrriq4A6H6A4 596 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Hmx1O70218 332 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Rnaseh1O70338 285 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Atf2P16951 487 aaKnown RBP12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Map3k9Q3U1V8 1077 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Trpd52l3Q9CQ14 231 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Arl2bpQ9D385 163 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Actn2Q9JI91 894 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Rps6ka2Q9WUT3 733 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gm5936A2BG95 728 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gm5640A3KG49 728 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gm3415J3QMS8 315 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Celf1P28659 486 aaKnown RBP12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Mrps31Q61733 384 aaKnown RBP12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Tmem132dQ76HP3 1097 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Fbxo11Q7TPD1 930 aaKnown RBP12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ttll4Q80UG8 1193 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Pramel6Q810Y9 485 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Trim35Q8C006 501 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gm3404Q9D506 307 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gja10Q9WUS4 505 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 HnrnpcQ9Z204 313 aaKnown RBP12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Iqcj-Schip1A0A088MLT8 559 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gimap9G3X987 291 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 DnttP09838 530 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Schip1P0DPB4 484 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 NxnP97346 435 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Stxbp3Q60770 592 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 PrimpolQ6P1E7 537 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Cnot10Q8BH15 744 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Pym1Q8CHP5 203 aaKnown RBP12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 HscbQ8K3A0 234 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Nos1Q9Z0J4 1429 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Kiaa1551Q5DTW7 1521 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Eddm13E9Q7F5 164 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 YwhagP61982 247 aaKnown RBP12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Esyt2Q3TZZ7 845 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Fam196bQ6GQV1 535 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ulbp1Q8HWA3 334 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Tspyl4Q8VD63 406 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Psip1Q99JF8 528 aaKnown RBP12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Cxcl11Q9JHH5 100 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Tulp4Q9JIL5 1547 aa12.68□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gm14525B1AZA0 212 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gm2012B1B0R1 212 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Heatr4E9Q357 955 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Flot1O08917 428 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Casp8O89110 480 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Stx2Q00262 289 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ccdc33Q3ULW6 985 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Arhgap44Q5SSM3 814 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Sorbs1Q62417 1290 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Krt87Q6IMF0 495 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ccdc169Q8BXX9 214 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Myef2Q8C854 591 aaKnown RBP12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Trim52Q8CDV4 233 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ciao1Q99KN2 339 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Vps33aQ9D2N9 598 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Angptl3Q9R182 455 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Pdcd11Q6NS46 1862 aaKnown RBP12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 PtprtQ99M80 1454 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gm7168A0AUV4 508 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 IkbkgO88522 412 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 EnahQ03173 802 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Dpcr1Q3TNW5 500 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gm5592Q3V0A6 857 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Prdm4Q80V63 803 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Taf12Q8VE65 161 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Tc2nQ91XT6 489 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 TnrQ8BYI9 1358 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gucy1a2F8VQK3 730 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ubn1Q4G0F8 1135 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Pwp2Q8BU03 919 aaKnown RBP12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Tmem63cQ8CBX0 802 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Tgs1Q923W1 853 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Bnip3lQ9Z2F7 218 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Tal1P22091 329 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Stim2P83093 746 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Mpp4Q6P7F1 635 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ccdc40Q8BI79 1192 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Rbbp5Q8BX09 538 aaKnown RBP12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Capn15Q9JLG8 1095 aa12.67□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Cdc42bpaQ3UU96 1719 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gm11985A0A1B0GS61 206 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Rsbn1lD3Z0K6 821 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Cyp3a25O09158 503 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Cyp2d11P24457 504 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Cacnb3P54285 484 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gjb4Q02738 266 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Miga1Q4QQM5 600 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Dync1li2Q6PDL0 492 aaKnown RBP12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 GypcQ78HU7 95 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 NkapQ9D0F4 415 aaKnown RBP12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Spata17Q9D552 379 aa12.66□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms