RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Btbd35f14Q1LZI5 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd35f27Q5FWA1 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ppp2r5aQ6PD03 486 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Tacc1Q6Y685 774 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 IrgcQ8C262 412 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 TdrpQ8C5P7 182 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Mettl13Q91YR5 698 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 GMCL1P1Q99N64 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Fsip1Q9D3V5 435 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Txnrd1Q9JMH6 613 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Trpm3Q5F4S9 1721 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Rgsl1H3BL40 1073 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Cdk2ap1O35207 114 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Akap10O88845 662 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Q3TQI7 289 aaKnown RBP10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 P3h1Q3V1T4 739 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ccdc84Q4VA36 332 aaKnown RBP10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Cacna2d4Q5RJF7 1116 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Txndc16Q7TN22 820 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Dnph1Q80VJ3 173 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ctdspl2Q8BG15 465 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Cep128Q8BI22 1102 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Morc4Q8BMD7 928 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Nat14Q8BVG8 206 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Nrbp2Q91V36 499 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Eif4enif1Q9EST3 983 aaKnown RBP10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Nlrp5Q9R1M5 1163 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Myh13B1AR69 1938 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 CluhQ5SW19 1315 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Col20a1Q923P0 1320 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Olfr310B2RVZ1 332 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Gm10134F6ZQC6 126 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Zfp212G3X8R7 492 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Trim34bJ3QNR8 485 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Gucy1b3O54865 620 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ugt1a2P70691 533 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ikzf1Q03267 517 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Cd300lgQ1ERP8 331 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ppp1r12cQ3UMT1 782 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Igbp1Q61249 340 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Map2k2Q63932 401 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Atp4aQ64436 1033 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Adam6bQ6IMH7 756 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ranbp6Q8BIV3 1105 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ccser1Q8C0C4 895 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Kcnv2Q8CFS6 562 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Slc26a8Q8R0C3 999 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Txndc5Q91W90 417 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 BrdtQ91Y44 956 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Trim34aQ99PP6 485 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 AmfrQ9R049 643 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 SmapQ9R0P4 181 aaKnown RBP10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ttc30a2A2AKQ8 664 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Gm10110D3Z5M2 615 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Gm3383J3QQ59 259 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Gm3164L7N2B9 238 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Gm3239L7N2D9 227 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Unc5cO08747 931 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Pex5O09012 639 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Casq2O09161 415 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Slc27a3O88561 667 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ccnd1P25322 295 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Kpnb1P70168 876 aaKnown RBP10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 HpcaP84075 193 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Trim43bP86448 445 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Usp17leQ7M764 540 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Tyw3Q8BSA9 257 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd9Q8C726 612 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Fam161bQ8CB59 589 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ttc30a1Q99J38 664 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Tex13bQ99MW5 186 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ttc30bQ9CY00 664 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 PycardQ9EPB4 193 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Tuba8Q9JJZ2 449 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Klra17Q9JMA4 273 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 RpgrQ9R0X5 1001 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Psma7Q9Z2U0 248 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 PfasQ5SUR0 1337 aa10.61□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Arap3Q8R5G7 1538 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Nwd1A6H603 1563 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Sec14l1A8Y5H7 715 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Gm44503E9PYU5 387 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Atf5O70191 283 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Il7P10168 154 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Trim43cP86449 446 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Cage1Q5IR70 849 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 TmpoQ61033 693 aaKnown RBP10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Krt12Q64291 487 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Mindy1Q76LS9 468 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Acnat2Q8BGG9 420 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Nlrp4aQ8BU40 982 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Dclre1bQ8C7W7 541 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Fermt2Q8CIB5 680 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ctage5Q8R311 779 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ube2sQ921J4 223 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Taf11Q99JX1 211 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ror2Q9Z138 944 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Abca14E9Q8F8 1683 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 A630010A05RikA9C473 232 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Rap1gds1E9Q912 607 aa10.6□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms