RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Gja8P28236 440 aa11.29□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Ccdc154Q6RUT8 657 aa11.29□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Abcb6Q9DC29 842 aa11.29□□□□□ -0.6
Scn8a-201ENSMUST00000082209 ShprhQ7TPQ3 1674 aa11.29□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Gm43738A0A0G2JEA5 862 aa11.29□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Xbp1O35426 267 aa11.29□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Lrrc6O88978 473 aa11.29□□□□□ -0.6
Scn8a-201ENSMUST00000082209 DnttP09838 530 aa11.29□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Snx1Q9WV80 522 aa11.29□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Ppp2r3dQ9Z176 491 aa11.29□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Ccdc40Q8BI79 1192 aa11.29□□□□□ -0.6
Scn8a-201ENSMUST00000082209 LRWD1Q8BUI3 648 aaKnown RBP11.29□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Desi2Q9D291 194 aa11.29□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Eef2kO08796 724 aa11.29□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Pak4Q8BTW9 593 aa11.29□□□□□ -0.6
Scn8a-201ENSMUST00000082209 SmapQ9R0P4 181 aaKnown RBP11.29□□□□□ -0.6
Scn8a-201ENSMUST00000082209 HiraQ61666 1015 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Galnt15Q9D2N8 638 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 IdeQ9JHR7 1019 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Ovgp1Q62010 721 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 St13Q99L47 371 aaKnown RBP11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Gpaa1Q9WTK3 621 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Mdc1Q5PSV9 1707 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Gm5580A0A0N4SVP8 411 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Map3k12Q60700 888 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Oxsr1Q6P9R2 527 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Tex19.1Q99MV2 351 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Ccdc194A0A140LIT1 234 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Gna15P30678 374 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 NxnP97346 435 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Nsun2Q1HFZ0 757 aaKnown RBP11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Tmem132dQ76HP3 1097 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Ccdc65Q8VHI7 493 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Apopt1Q9CQW7 192 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Stk39Q9Z1W9 556 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Vmn2r78K7N6U5 853 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Polr2fP61219 127 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Tcp11Q01755 566 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Vipas39Q8BGQ1 491 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Rbm31yQ9D3U4 565 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Cul9Q80TT8 1865 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Fam47cQ14BE7 430 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Tgif2lx2Q8K5B9 231 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Serpina9Q9D7D2 418 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 TxkP42682 527 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Slc9a2Q3ZAS0 814 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Ipo11Q8K2V6 975 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Taf1bP97358 586 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Trim43aQ3TL54 445 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 WaplQ65Z40 1200 aaKnown RBP11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Rpa3Q9CQ71 121 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Ccdc182Q9D9C6 152 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Atp10bB1AWN4 1474 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Top3aO70157 1003 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Ccdc153P0C7Q1 202 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 PapolaQ61183 739 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Krt39Q6IFX4 482 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Serpinb3dQ6UKZ0 387 aa11.28□□□□□ -0.6
Scn8a-201ENSMUST00000082209 NntQ61941 1086 aaKnown RBP11.27□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Trim62Q80V85 475 aa11.27□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Enc1O35709 589 aa11.27□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Ahcyl2Q68FL4 613 aaKnown RBP11.27□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Klhl29Q80T74 875 aa11.27□□□□□ -0.6
Scn8a-201ENSMUST00000082209 TnrQ8BYI9 1358 aa11.27□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Cep70Q6IQY5 616 aa11.27□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Mrps25Q9D125 171 aaKnown RBP11.27□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Mybl1P51960 751 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Scg2Q03517 617 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Bag5Q8CI32 447 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Pdik1lQ8QZR7 341 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Mcf2A2AEU1 1111 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 CalcaP70160 136 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Tmed1Q3V009 227 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Xab2Q9DCD2 855 aaKnown RBP11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Tk2Q9R088 270 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Pabpc1lA2A5N3 607 aaKnown RBP11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Zfyve27Q3TXX3 415 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Nab2Q61127 525 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Dnm3Q8BZ98 863 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Slc18a1Q8R090 521 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Cuedc2Q9CXX9 284 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Eif4enif1Q9EST3 983 aaKnown RBP11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 GakQ99KY4 1305 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Prex1Q69ZK0 1650 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Gucy1b3O54865 620 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 NonoQ99K48 473 aaKnown RBP11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 ArhgdiaQ99PT1 204 aaKnown RBP11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Samsn1P57725 372 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Bcap29Q61334 240 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Dbndd1Q9CZ00 160 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Pex11aQ9Z211 246 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Mroh6V9GX81 722 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Ptpn23Q6PB44 1692 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Axin2O88566 840 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 CnstQ8CBC4 711 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Abhd8Q8R0P8 439 aa11.27□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Sox5P35710 763 aa11.26□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Palm2Q8BR92 376 aa11.26□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Antxr1Q9CZ52 562 aa11.26□□□□□ -0.61
Scn8a-201ENSMUST00000082209 Gbp4A4UUI3 631 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms