RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Exoc3Q6KAR6 755 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ythdf3Q8BYK6 585 aaKnown RBP9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ddx47Q9CWX9 455 aaKnown RBP9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ascc1Q9D8Z1 356 aaKnown RBP9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Izumo3A6PWV3 263 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ccdc152E9PX14 254 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Myo1eE9Q634 1107 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Vmn2r71L7N2D8 855 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Diaph2O70566 1098 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Pde8aO88502 823 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Stx8O88983 236 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 LdhaP06151 332 aaKnown RBP9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Mx1P09922 631 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Fkbp1aP26883 108 aaKnown RBP9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Git1Q68FF6 770 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 RragaQ80X95 313 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Q8CD60 292 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 HdlbpQ8VDJ3 1268 aaKnown RBP9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Atp6v0a4Q920R6 833 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Smtnl1Q99LM3 459 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Mmtag2Q99LX5 260 aaKnown RBP9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Myh4Q5SX39 1939 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Sipa1l3G3X9J0 1776 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 VirmaA2AIV2 1811 aaKnown RBP9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Chrna9G3X8Z7 479 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Rrm1P07742 792 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Siah1aP61092 282 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ddr1Q03146 911 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Zfyve27Q3TXX3 415 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Arhgef2Q60875 985 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Mcm7Q61881 719 aaKnown RBP9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Cnnm4Q69ZF7 771 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Cplx4Q80WM3 160 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Snip1Q8BIZ6 383 aaKnown RBP9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Trim9Q8C7M3 817 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 H6pdQ8CFX1 789 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Arhgap18Q8K0Q5 663 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Slc40a1Q9JHI9 570 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Rabgef1Q9JM13 491 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 GgcxQ9QYC7 757 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Zfp142G5E869 1843 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Zscan18E9PUD6 809 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 ErmardE9Q048 622 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Bnip3O55003 187 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 GabrdP22933 449 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Stat5bP42232 786 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Dynll1P63168 89 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Rasa3Q60790 834 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Hif1aQ61221 836 aaKnown RBP9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Usp17leQ7M764 540 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Camsap3Q80VC9 1252 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Efcab14Q8BGQ6 484 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Fam210aQ8BGY7 273 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Rcor2Q8C796 523 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Usb1Q91W78 267 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Cabp7Q91ZM8 215 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Bcl11bQ99PV8 884 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Rhobtb3Q9CTN4 611 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Zfyve19Q9DAZ9 389 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 EhhadhQ9DBM2 718 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ndst4Q9EQW8 872 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Exoc4O35382 975 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Gucy1b3O54865 620 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Nmt2O70311 529 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Tnnc1P19123 161 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Acot10Q32MW3 439 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Lrrc55Q3UY51 311 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Zscan26Q5RJ54 466 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 PapolaQ61183 739 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Nr6a1Q64249 495 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Krt40Q6IFX3 439 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 GopcQ8BH60 463 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Als2cr12Q8BVM7 383 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Washc5Q8C2E7 1159 aaKnown RBP9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ifih1Q8R5F7 1025 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Luc7lQ9CYI4 371 aaKnown RBP9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Tktl2Q9D4D4 627 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Rnf138rt1Q9D9M9 248 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Tacc2Q9JJG0 1149 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Txnrd1Q9JMH6 613 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Cfap44E9Q5M6 1843 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Otud7bB2RUR8 840 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Scgb2b7D3YYY1 112 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 XlrP05531 208 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ctnnd1P30999 938 aaKnown RBP9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Pde4dQ01063 747 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Sorbs1Q62417 1290 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Krt74Q6IFZ9 495 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Mtss1lQ6P9S0 715 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 GlmnQ8BZM1 596 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Mettl5Q8K1A0 209 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Arfgap2Q99K28 520 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 MmadhcQ99LS1 296 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Arl2bpQ9D385 163 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Sh2b2Q9JID9 621 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Git2Q9JLQ2 708 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Plcb1Q9Z1B3 1216 aa9.05□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Sclt1G5E861 688 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 ClppO88696 272 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ighmbp2P40694 993 aa9.04□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms