RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 Ccdc28bQ8CEG5 200 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Plagl2Q925T4 496 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 WtapQ9ER69 396 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Cd2apQ9JLQ0 637 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Stk39Q9Z1W9 556 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Chd4Q6PDQ2 1915 aaKnown RBP6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Col1a2Q01149 1372 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Zfp839E9PUU5 921 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Stag2O35638 1231 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Dync1i2O88487 612 aaKnown RBP6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 AgtP11859 477 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Art2aP17981 287 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Akr1b7P21300 316 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 MarcksP26645 309 aaKnown RBP6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 S100a5P63084 93 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Syce2Q505B8 171 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Taok1Q5F2E8 1001 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Asap3Q5U464 904 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Mcm7Q61881 719 aaKnown RBP6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Cyp4x1Q6A152 507 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Rnf220Q6PDX6 566 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Tlr11Q6R5P0 926 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Q8R1Y2 203 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 DolkQ8R2Y3 534 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Pcdh18Q8VHR0 1134 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Ptdss1Q99LH2 473 aaKnown RBP6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Smtnl1Q99LM3 459 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 MajinQ9D992 256 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Ppp1r12aQ9DBR7 1029 aaKnown RBP6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 IydQ9DCX8 285 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Nphs1Q9QZS7 1256 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Suclg2Q9Z2I8 433 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Mzf1S4R1L6 814 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 PfasQ5SUR0 1337 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Snapc4Q8BP86 1333 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 GakQ99KY4 1305 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 InsrrQ9WTL4 1300 aa6.21□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Atp2c2A7L9Z8 944 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Hoxc9P09633 260 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 NapbP28663 298 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 PltpP55065 493 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Acap3Q6NXL5 833 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Aggf1Q7TN31 711 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Wasf2Q8BH43 497 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Lrrc14Q8VC16 493 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 AticQ9CWJ9 592 aaKnown RBP6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Spata17Q9D552 379 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Wdr64Q9D565 1086 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Ccdc91Q9D8L5 442 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Prpf4Q9DAW6 521 aaKnown RBP6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Sgpp1Q9JI99 430 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Atp6v1c1Q9Z1G3 382 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 PtpruB1AUH1 1446 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Osbpl9A2A8Z1 736 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Cyp3a59D3Z2W7 503 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Ptpn20O55082 426 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Gad1P48318 593 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Calb2Q08331 271 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Pyroxd1Q3TMV7 498 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Slc38a10Q5I012 1090 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Arhgef2Q60875 985 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 CyldQ80TQ2 952 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Eif4bQ8BGD9 611 aaKnown RBP6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Smndc1Q8BGT7 238 aaKnown RBP6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Cdk17Q8K0D0 523 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Apbb1ipQ8R5A3 670 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Setd6Q9CWY3 473 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Sgf29Q9DA08 293 aaKnown RBP6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Rsph3bQ9DA80 389 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 IkbipQ9DBZ1 373 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 PyglQ9ET01 850 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Orc3Q9JK30 715 aaKnown RBP6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Acot3Q9QYR7 432 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Topaz1E5FYH1 1653 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 NktrP30415 1453 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Shank2Q80Z38 1476 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Fam171a1A2ATK9 892 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Speer2E9Q9U2 264 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Cetn3O35648 167 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Hspa2P17156 633 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 AdkP55264 361 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Mphosph8Q3TYA6 858 aaKnown RBP6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Palb2Q3U0P1 1104 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Slc9a2Q3ZAS0 814 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Oxr1Q4KMM3 866 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Sh3gl1Q62419 368 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 NfrkbQ6PIJ4 1296 aaKnown RBP6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Snip1Q8BIZ6 383 aaKnown RBP6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Tarsl2Q8BLY2 790 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Bicd1Q8BR07 835 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Ppfia2Q8BSS9 1257 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Q8K2W9 541 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Nlgn1Q99K10 843 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Cttnbp2nlQ99LJ0 638 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Eef1gQ9D8N0 437 aaKnown RBP6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 PycardQ9EPB4 193 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Rtl9Q32KG4 1339 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Flt4P35917 1363 aa6.2□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 Frmd7A2AD83 703 aa6.19□□□□□ -1.42
Rc3h1-201ENSMUST00000035911 AfpP02772 605 aa6.19□□□□□ -1.42
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms