RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Myo1hQ9D6A1 958 aa12.95□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Tekt1Q9DAJ2 418 aa12.95□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 AV320801A2AWL3 467 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Gm15023L7MUB4 467 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Pcif1P59114 706 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Cnnm3Q32NY4 713 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 PomkQ3TUA9 349 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Pbxip1Q3TVI8 727 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Fdxacb1Q3UY23 622 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 4933427I04RikQ3V053 235 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Ddr2Q62371 854 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Ifit1Q64282 463 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Tcaf3Q6QR59 914 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Tmem132dQ76HP3 1097 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 LppQ8BFW7 613 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Nipa1Q8BHK1 323 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Sun2Q8BJS4 731 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 AdpgkQ8VDL4 496 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Mtmr14Q8VEL2 648 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 1700129C05RikQ9CQ77 218 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Mrpl44Q9CY73 333 aaKnown RBP12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Saal1Q9D2C2 474 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Extl2Q9ES89 330 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Dclk1Q9JLM8 756 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 BcamQ9R069 622 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Mrvi1Q9WUX5 899 aaKnown RBP12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Kntc1Q8C3Y4 2207 aa12.94□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Gm7086A0A1W2P766 342 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Jakmip2D3YXK0 820 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Gm4788E9Q8B5 879 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Ccl26F8VQM2 93 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 StrnO55106 780 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Cd72P21855 354 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 NcanP55066 1268 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Erbb2P70424 1256 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Ly9Q01965 654 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Ccdc33Q3ULW6 985 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Ccdc82Q6PG04 518 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Ccdc172Q810N9 267 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 CnstQ8CBC4 711 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Celf3Q8CIN6 465 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Iqsec1Q8R0S2 961 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Kdm4cQ8VCD7 1054 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Coa7Q921H9 231 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Ccdc81Q9D5W4 654 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Mipol1Q9D9F8 279 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Dmrtc1Q9D9R7 182 aa12.93□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Pate3B3GLJ3 98 aa12.92□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Gm38392E9Q2A2 434 aa12.92□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Sptlc1O35704 473 aa12.92□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Timm44O35857 452 aa12.92□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 AcrP23578 436 aa12.92□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Pla2g4eQ50L42 875 aa12.92□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Ddx19aQ61655 478 aaKnown RBP12.92□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Mtmr10Q7TPM9 771 aa12.92□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Usp20Q8C6M1 916 aa12.92□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Sertad1Q9JL10 236 aa12.92□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Ccnt1Q9QWV9 724 aaKnown RBP12.92□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Vav3Q9R0C8 847 aa12.92□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Galk1Q9R0N0 392 aa12.92□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Mtmr9Q9Z2D0 545 aa12.92□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 PtprcP06800 1291 aa12.91□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Glud1P26443 558 aaKnown RBP12.91□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Col9a2Q07643 688 aa12.91□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Arrdc3Q7TPQ9 414 aa12.91□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Cwf19l2Q8BG79 887 aaKnown RBP12.91□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Prkag3Q8BGM7 489 aa12.91□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Cnksr3Q8BMA3 555 aa12.91□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Sec62Q8BU14 398 aaKnown RBP12.91□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Aldh5a1Q8BWF0 523 aa12.91□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Vps53Q8CCB4 832 aa12.91□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Oit3Q8R4V5 546 aa12.91□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 ZwintQ9CQU5 252 aa12.91□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Bloc1s2Q9CWG9 143 aa12.91□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Cndp2Q9D1A2 475 aaKnown RBP12.91□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Rpap3Q9D706 660 aa12.91□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Rbp7Q9EPC5 134 aa12.91□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Gm11549A0A286YD83 63 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Sptbn5F6UCX4 1208 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Lrrc32G3XA59 663 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Mpp3O88910 568 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Il2rbP16297 539 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 U2af2P26369 475 aaKnown RBP12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Actr2P61161 394 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Epha2Q03145 977 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Col6a1Q04857 1025 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Srd5a1Q68FF9 255 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Zbed4Q80WQ9 1168 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Dusp4Q8BFV3 398 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Larp6Q8BN59 492 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Azin2Q8BVM4 459 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Q8K2W9 541 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Dnajc19Q9CQV7 116 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Smc3Q9CW03 1217 aaKnown RBP12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 PycardQ9EPB4 193 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Trpm5Q9JJH7 1158 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Nudt5Q9JKX6 218 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Tle2Q9WVB2 767 aa12.9□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 MarcksP26645 309 aaKnown RBP12.89□□□□□ -0.35
Ccdc28b-201ENSMUST00000030586 Rfx1P48377 963 aa12.89□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms