RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Akap4Q60662 849 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Ezh2Q61188 746 aaKnown RBP16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Atp2b4Q6Q477 1205 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Ccdc43Q9CR29 222 aaKnown RBP16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Prdm11A2AGX3 565 aa16.62■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Orc4O88708 433 aa16.62■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Fam183bQ5NC57 135 aa16.62■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Usp15Q8R5H1 981 aa16.62■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 1700020D05RikQ99PB1 294 aa16.62■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Ccdc89Q9DA73 370 aa16.62■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Sept2P42208 361 aaKnown RBP16.62■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Psmc2P46471 433 aa16.62■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Hps5P59438 1126 aa16.62■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Snap25P60879 206 aa16.62■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Wdr70Q3TWF6 657 aa16.62■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 PodnQ7TQ62 611 aa16.62■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Cog5Q8C0L8 829 aa16.62■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Klhl20Q8VCK5 604 aa16.62■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Kif17Q99PW8 1038 aa16.62■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Tbx18Q9EPZ6 613 aa16.62■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Fgd3O88842 733 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Pla2g4aP47713 748 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Cdc25aP48964 514 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Krt14Q61781 484 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Fhod1Q6P9Q4 1197 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 GanQ8CA72 597 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Lztfl1Q9JHQ5 299 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Gm5737A0A140LI11 423 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Vmn2r79E9Q067 851 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Cfap100Q80VN0 613 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Vipas39Q8BGQ1 491 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Tldc1Q8K0P3 455 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Apol10bG3X9K7 334 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Slc12a2P55012 1205 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Rhbdf1Q6PIX5 856 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Skor1Q8BX46 964 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Adcy3Q8VHH7 1145 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Ears2Q9CXJ1 523 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Tjap1Q9DCD5 539 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Nap1l5Q9JJF0 156 aa16.61■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 VirmaA2AIV2 1811 aaKnown RBP16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Col5a2Q3U962 1497 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Ankrd35E9Q9D8 996 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Rnf40Q3U319 1001 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Gm5169Q5M8P2 212 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Mapk6Q61532 720 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 HrQ61645 1182 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 NntQ61941 1086 aaKnown RBP16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Sh3gl1Q62419 368 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Msl1Q6PDM1 616 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Mkrn1Q9QXP6 481 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Zfp646Q6NV66 1788 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Gm28919A0A087WP35 240 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 MtrA6H5Y3 1253 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 CrkQ64010 304 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 SpidrQ8BGX7 933 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Slc13a4Q8BZ82 625 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Ubxn6Q99PL6 442 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Nol7Q9D7Z3 254 aaKnown RBP16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Vav3Q9R0C8 847 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Peg12Q9WVA7 283 aa16.6■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Lbhd1A0A087WPA0 259 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Trap1aP19473 224 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Gad1P48318 593 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Lrrc36Q3V0M2 755 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Exoc8Q6PGF7 716 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Lrsam1Q80ZI6 727 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Atxn7Q8R4I1 867 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Josd2Q9CR30 188 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Cntnap1O54991 1385 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Mroh8E9PYI4 1049 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Stat4P42228 749 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Gja5Q01231 358 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Meis1Q60954 390 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 GartQ64737 1010 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Nap1l4Q78ZA7 375 aaKnown RBP16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Tmc4Q7TQ65 694 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Ubxn1Q922Y1 297 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Lpin2Q99PI5 893 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Slc12a7Q9WVL3 1083 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Cyp2ab1S4R196 498 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Gm1758F6VZZ1 202 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Pcdha4O88689 947 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Tcp1P11983 556 aaKnown RBP16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Nedd1P33215 660 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Tcerg1lQ3B807 590 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Mettl14Q3UIK4 456 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 SlmapQ3URD3 845 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Ccdc114Q3UX62 658 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Foxd1Q61345 456 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Sdad1Q80UZ2 687 aaKnown RBP16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Mmgt1Q8K273 131 aaKnown RBP16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 DexiQ9WUQ7 95 aa16.59■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Dnaaf5B9EJR8 853 aa16.58■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Mybl2P48972 704 aa16.58■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Psmc6P62334 389 aa16.58■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Meis2P97367 477 aa16.58■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Pls1Q3V0K9 630 aa16.58■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Ccdc157Q5SPX1 718 aa16.58■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Bhmt2Q91WS4 363 aa16.58■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 79.7 ms