RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Chp1P61022 195 aa11.9□□□□□ -0.51
Msh3-201ENSMUST00000022220 Tex35Q14BK3 207 aa11.9□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ckap2Q3V1H1 664 aa11.9□□□□□ -0.51
Msh3-201ENSMUST00000022220 Carmil2Q3V3V9 1296 aa11.9□□□□□ -0.51
Msh3-201ENSMUST00000022220 Sco1Q5SUC9 284 aa11.9□□□□□ -0.51
Msh3-201ENSMUST00000022220 HarsQ61035 509 aa11.9□□□□□ -0.51
Msh3-201ENSMUST00000022220 Naa35Q6PHQ8 725 aa11.9□□□□□ -0.51
Msh3-201ENSMUST00000022220 Depdc1bQ8BH88 529 aa11.9□□□□□ -0.51
Msh3-201ENSMUST00000022220 Leng8Q8CBY3 785 aaKnown RBP11.9□□□□□ -0.51
Msh3-201ENSMUST00000022220 Apobec3Q99J72 440 aaKnown RBP11.9□□□□□ -0.51
Msh3-201ENSMUST00000022220 Glrx3Q9CQM9 337 aa11.9□□□□□ -0.51
Msh3-201ENSMUST00000022220 Dpp7Q9ET22 506 aa11.9□□□□□ -0.51
Msh3-201ENSMUST00000022220 Aox3G3X982 1335 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Gm7168A0AUV4 508 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ighmbp2P40694 993 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Klra4Q60651 263 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Sval3Q76I99 144 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Baiap3Q80TT2 1134 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Tmem60Q8K174 133 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Klhl20Q8VCK5 604 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Dnajc17Q91WT4 303 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 4930449I24RikQ9D5E3 319 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 DexiQ9WUQ7 95 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Map2P20357 1828 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Tmem132bF7BAB2 1078 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 LtbrP50284 415 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Siah1aP61092 282 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 ItgadQ3V0T4 1168 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Stxbp2Q64324 593 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Nap1l4Q78ZA7 375 aaKnown RBP11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 LRWD1Q8BUI3 648 aaKnown RBP11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ushbp1Q8R370 680 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 CpdO89001 1377 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Gimd1E9PW74 217 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Art2aP17981 287 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Gm5935Q497S0 212 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Prl2c1Q5SVL9 228 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Slitrk3Q810B9 980 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Zfp446Q8C9M8 523 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Apbb1ipQ8R5A3 670 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Actn2Q9JI91 894 aa11.89□□□□□ -0.51
Msh3-201ENSMUST00000022220 Map7d1A2AJI0 846 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Acad12D3Z7X0 555 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Mroh8E9PYI4 1049 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Serpinb6dQ3UWK8 375 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Elf1Q60775 612 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Slc7a6osQ7TPE5 306 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Vipas39Q8BGQ1 491 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Tor4aQ8BH02 426 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Fbxo28Q8BIG4 368 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Plcg2Q8CIH5 1265 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Prpf6Q91YR7 941 aaKnown RBP11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Trp53inp1Q9QXE4 239 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ahnak2E9PYB0 1738 aaKnown RBP11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Axin2O88566 840 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Gja5Q01231 358 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Sec23aQ01405 765 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Slc7a1Q09143 622 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Olfr832Q7TRG9 312 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 F13a1Q8BH61 732 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Acat1Q8QZT1 424 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Slc12a8Q8VI23 705 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Arfgap2Q99K28 520 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Q9DAQ4 598 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Naaladl2A0A0N4SUJ3 795 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Gm5134E9QAB5 671 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Zfp213E9QAW0 468 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Psmd14O35593 310 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Aimp1P31230 310 aaKnown RBP11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Nr2f2P43135 414 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Akap4Q60662 849 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Kcnv2Q8CFS6 562 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Uap1Q91YN5 522 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Tnpo2Q99LG2 887 aaKnown RBP11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Adamtsl3G3UXC7 1706 aa11.88□□□□□ -0.51
Msh3-201ENSMUST00000022220 Gm45194A0A140LJG2 572 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Zfp408H7BX78 710 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Krt18P05784 423 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 GssP51855 474 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Fmnl3Q6ZPF4 1028 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Scfd1Q8BRF7 639 aaKnown RBP11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Rint1Q8BZ36 792 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Usp37Q8C0R0 979 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ube2q2Q8K2Z8 378 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Spata4Q8K3V1 295 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Atp6v0a4Q920R6 833 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 CoasyQ9DBL7 563 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ppef2O35385 757 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Kdm7aQ3UWM4 940 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Tbx2Q60707 711 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ift20Q61025 132 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 HrQ61645 1182 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Rbm12b2Q66JV4 834 aaKnown RBP11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 DaglaQ6WQJ1 1044 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Lin9Q8C735 542 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Trappc12Q8K2L8 797 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Zmym2Q9CU65 1376 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 DgkiD3YWQ0 1071 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Clcn6O35454 870 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Magea1O89006 320 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms