RNA–Protein interactions for RNA: snR3

snR3, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR3, Length 194 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR3	snR3	YPR003C	P53394	754 aa		4.77	□□□□□ -1.65
snR3	snR3	SMA1	Q02651	245 aa		4.77	□□□□□ -1.65
snR3	snR3	EKI1	Q03764	534 aa		4.77	□□□□□ -1.65
snR3	snR3	RAD34	Q06665	692 aa		4.77	□□□□□ -1.65
snR3	snR3	NSE1	Q07913	336 aa		4.77	□□□□□ -1.65
snR3	snR3	RRT8	Q08219	342 aa		4.77	□□□□□ -1.65
snR3	snR3	BUG1	Q12191	341 aa		4.77	□□□□□ -1.65
snR3	snR3	RRD2	Q12461	358 aa		4.77	□□□□□ -1.65
snR3	snR3	MRPL23	Q12487	163 aa	Predicted RBP	4.77	□□□□□ -1.65
snR3	snR3	STE2	D6VTK4	431 aa		4.76	□□□□□ -1.65
snR3	snR3	RPL7A	P05737	244 aa	Known RBP	4.76	□□□□□ -1.65
snR3	snR3	RNR2	P09938	399 aa	Known RBP	4.76	□□□□□ -1.65
snR3	snR3	ATP10	P18496	279 aa		4.76	□□□□□ -1.65
snR3	snR3	SAG1	P20840	650 aa		4.76	□□□□□ -1.65
snR3	snR3	CLB2	P24869	491 aa		4.76	□□□□□ -1.65
snR3	snR3	BNA4	P38169	460 aa		4.76	□□□□□ -1.65
snR3	snR3	PCA1	P38360	1216 aa		4.76	□□□□□ -1.65
snR3	snR3	PEX18	P38855	283 aa		4.76	□□□□□ -1.65
snR3	snR3	MNL1	P38888	796 aa		4.76	□□□□□ -1.65
snR3	snR3	SNG1	P46950	547 aa		4.76	□□□□□ -1.65
snR3	snR3	ROG1	P53118	685 aa		4.76	□□□□□ -1.65
snR3	snR3	LSC1	P53598	329 aa	Known RBP	4.76	□□□□□ -1.65
snR3	snR3	SMA2	Q04658	369 aa		4.76	□□□□□ -1.65
snR3	snR3	ATG26	Q06321	1198 aa		4.76	□□□□□ -1.65
snR3	snR3	MCP2	Q06567	569 aa		4.76	□□□□□ -1.65
snR3	snR3	YLR040C	Q07988	224 aa		4.76	□□□□□ -1.65
snR3	snR3	ULA1	Q12059	462 aa		4.76	□□□□□ -1.65
snR3	snR3	NCE102	Q12207	173 aa	RIP-Chip data	4.76	□□□□□ -1.65	not detected
snR3	snR3	RPL7B	Q12213	244 aa	Known RBP	4.76	□□□□□ -1.65
snR3	snR3	ADE4	P04046	510 aa	Known RBP	4.75	□□□□□ -1.65
snR3	snR3	THR4	P16120	514 aa	Known RBP	4.75	□□□□□ -1.65
snR3	snR3	CNA1	P23287	553 aa		4.75	□□□□□ -1.65
snR3	snR3	MSS51	P32335	436 aa		4.75	□□□□□ -1.65
snR3	snR3	DUG2	P38149	878 aa		4.75	□□□□□ -1.65
snR3	snR3	RRN10	P38204	145 aa		4.75	□□□□□ -1.65
snR3	snR3	TCM62	P38228	572 aa	Known RBP	4.75	□□□□□ -1.65
snR3	snR3	SPC97	P38863	823 aa		4.75	□□□□□ -1.65
snR3	snR3	STN1	P38960	494 aa		4.75	□□□□□ -1.65
snR3	snR3	END3	P39013	349 aa		4.75	□□□□□ -1.65
snR3	snR3	YHC3	P47040	408 aa		4.75	□□□□□ -1.65
snR3	snR3	ZPR1	P53303	486 aa	Known RBP	4.75	□□□□□ -1.65
snR3	snR3	DUG3	P53871	357 aa		4.75	□□□□□ -1.65
snR3	snR3	YOR389W	Q08912	624 aa		4.75	□□□□□ -1.65
snR3	snR3	TDH1	P00360	332 aa	Known RBP	4.74	□□□□□ -1.65
snR3	snR3	GAL3	P13045	520 aa		4.74	□□□□□ -1.65
snR3	snR3	PMA2	P19657	947 aa		4.74	□□□□□ -1.65
snR3	snR3	GAS1	P22146	559 aa	Known RBP	4.74	□□□□□ -1.65
snR3	snR3	PRP21	P32524	280 aa	Predicted RBP	4.74	□□□□□ -1.65
snR3	snR3	MRP4	P32902	394 aa		4.74	□□□□□ -1.65
snR3	snR3	CBP4	P37267	147 aa		4.74	□□□□□ -1.65
snR3	snR3	RFC3	P38629	340 aa		4.74	□□□□□ -1.65
snR3	snR3	CTM1	P38818	585 aa		4.74	□□□□□ -1.65
snR3	snR3	UBA4	P38820	440 aa		4.74	□□□□□ -1.65
snR3	snR3	BZZ1	P38822	633 aa		4.74	□□□□□ -1.65
snR3	snR3	PCF11	P39081	626 aa	Predicted RBP	4.74	□□□□□ -1.65
snR3	snR3	MIT1	P40002	666 aa		4.74	□□□□□ -1.65
snR3	snR3	PAC11	P40960	533 aa		4.74	□□□□□ -1.65
snR3	snR3	YJR011C	P47086	261 aa	Predicted RBP	4.74	□□□□□ -1.65
snR3	snR3	EMC2	P47133	292 aa	Known RBP	4.74	□□□□□ -1.65
snR3	snR3	LYS20	P48570	428 aa	Known RBP	4.74	□□□□□ -1.65
snR3	snR3	PYK2	P52489	506 aa	Known RBP	4.74	□□□□□ -1.65
snR3	snR3	YGL114W	P53134	725 aa		4.74	□□□□□ -1.65
snR3	snR3	LSB1	P53281	241 aa		4.74	□□□□□ -1.65
snR3	snR3	YTP1	P53584	459 aa		4.74	□□□□□ -1.65
snR3	snR3	MPP6	P53725	186 aa	Predicted RBP	4.74	□□□□□ -1.65
snR3	snR3	YVH1	Q02256	364 aa	Known RBP	4.74	□□□□□ -1.65
snR3	snR3	SNU56	Q03782	492 aa	Known RBP	4.74	□□□□□ -1.65
snR3	snR3	ATC1	Q04005	294 aa		4.74	□□□□□ -1.65
snR3	snR3	MDM30	Q05930	598 aa		4.74	□□□□□ -1.65
snR3	snR3	ARV1	Q06541	321 aa		4.74	□□□□□ -1.65
snR3	snR3	CDA2	Q06703	312 aa		4.74	□□□□□ -1.65
snR3	snR3	YOL073C	Q08232	322 aa		4.74	□□□□□ -1.65
snR3	snR3	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
snR3	snR3	SUT2	Q12286	268 aa		4.74	□□□□□ -1.65
snR3	snR3	COX3	P00420	269 aa		4.73	□□□□□ -1.65
snR3	snR3	BI2	P03873	423 aa		4.73	□□□□□ -1.65
snR3	snR3	SEC63	P14906	663 aa		4.73	□□□□□ -1.65
snR3	snR3	HNM1	P19807	563 aa		4.73	□□□□□ -1.65
snR3	snR3	YCR006C	P25350	157 aa		4.73	□□□□□ -1.65
snR3	snR3	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
snR3	snR3	OMA1	P36163	345 aa		4.73	□□□□□ -1.65
snR3	snR3	MRPL37	P36532	105 aa		4.73	□□□□□ -1.65
snR3	snR3	PET100	P38958	111 aa		4.73	□□□□□ -1.65
snR3	snR3	GAT2	P40209	560 aa		4.73	□□□□□ -1.65
snR3	snR3	CDC1	P40986	491 aa		4.73	□□□□□ -1.65
snR3	snR3	POP1	P41812	875 aa		4.73	□□□□□ -1.65
snR3	snR3	PHO23	P50947	330 aa		4.73	□□□□□ -1.65
snR3	snR3	PNC1	P53184	216 aa	Known RBP	4.73	□□□□□ -1.65
snR3	snR3	SHR3	Q02774	210 aa		4.73	□□□□□ -1.65
snR3	snR3	SEG1	Q04279	960 aa		4.73	□□□□□ -1.65
snR3	snR3	HSP31	Q04432	237 aa		4.73	□□□□□ -1.65
snR3	snR3	YMR310C	Q04867	317 aa	Predicted RBP	4.73	□□□□□ -1.65
snR3	snR3	YPR078C	Q06813	372 aa		4.73	□□□□□ -1.65
snR3	snR3	YOR365C	Q08844	703 aa		4.73	□□□□□ -1.65
snR3	snR3	QCR6	P00127	147 aa		4.72	□□□□□ -1.65
snR3	snR3	PEP5	P12868	1029 aa		4.72	□□□□□ -1.65
snR3	snR3	UGA1	P17649	471 aa		4.72	□□□□□ -1.65
snR3	snR3	TYR1	P20049	452 aa		4.72	□□□□□ -1.65
snR3	snR3	SAR1	P20606	190 aa	Known RBP	4.72	□□□□□ -1.65
snR3	snR3	HCM1	P25364	564 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms