RNA–Protein interactions for RNA: YPL124W

SPC29, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC29, Length 762 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC29YPL124W ATG16Q03818 150 aa2.5□□□□□ -2.01
SPC29YPL124W SAM1P10659 382 aaKnown RBP2.49□□□□□ -2.01
SPC29YPL124W EST1P17214 699 aaPredicted RBP2.49□□□□□ -2.01
SPC29YPL124W SAM2P19358 384 aaKnown RBP2.49□□□□□ -2.01
SPC29YPL124W PRD1P25375 712 aa2.49□□□□□ -2.01
SPC29YPL124W YBL029WP38201 376 aa2.49□□□□□ -2.01
SPC29YPL124W AFG3P39925 761 aa2.49□□□□□ -2.01
SPC29YPL124W IMD4P50094 524 aaKnown RBP2.49□□□□□ -2.01
SPC29YPL124W VID30P53076 958 aa2.49□□□□□ -2.01
SPC29YPL124W PNG1Q02890 363 aa2.49□□□□□ -2.01
SPC29YPL124W NMD4Q12129 218 aa2.49□□□□□ -2.01
SPC29YPL124W RAD61Q99359 647 aa2.49□□□□□ -2.01
SPC29YPL124W DPB3P27344 201 aa2.48□□□□□ -2.01
SPC29YPL124W TCD2P36101 447 aaKnown RBP2.48□□□□□ -2.01
SPC29YPL124W YBR225WP38321 900 aa2.48□□□□□ -2.01
SPC29YPL124W MST28P39552 234 aa2.48□□□□□ -2.01
SPC29YPL124W BRO1P48582 844 aa2.48□□□□□ -2.01
SPC29YPL124W MRP51Q02950 344 aa2.48□□□□□ -2.01
SPC29YPL124W YML131WQ03102 365 aa2.48□□□□□ -2.01
SPC29YPL124W NGL3Q03210 505 aa2.48□□□□□ -2.01
SPC29YPL124W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
SPC29YPL124W RLM1Q12224 676 aa2.48□□□□□ -2.01
SPC29YPL124W RRD2Q12461 358 aa2.48□□□□□ -2.01
SPC29YPL124W NOP58Q12499 511 aaKnown RBP2.48□□□□□ -2.01
SPC29YPL124W YBR126W-AQ8TGU7 68 aa2.48□□□□□ -2.01
SPC29YPL124W NFT1P0CE68 1218 aa2.47□□□□□ -2.01
SPC29YPL124W YAR066WP0CX18 203 aa2.47□□□□□ -2.01
SPC29YPL124W YHR214WP0CX19 203 aa2.47□□□□□ -2.01
SPC29YPL124W MNS1P32906 549 aa2.47□□□□□ -2.01
SPC29YPL124W RIB5P38145 238 aa2.47□□□□□ -2.01
SPC29YPL124W NCA3P46955 337 aa2.47□□□□□ -2.01
SPC29YPL124W MDG1P53885 366 aa2.47□□□□□ -2.01
SPC29YPL124W FIN1Q03898 291 aa2.47□□□□□ -2.01
SPC29YPL124W SSP2Q08646 371 aa2.47□□□□□ -2.01
SPC29YPL124W YBL111CQ3E7Y5 667 aa2.47□□□□□ -2.01
SPC29YPL124W LEU4P06208 619 aaKnown RBP2.46□□□□□ -2.02
SPC29YPL124W YBR137WP38276 179 aa2.46□□□□□ -2.02
SPC29YPL124W FLC2P39719 783 aa2.46□□□□□ -2.02
SPC29YPL124W DUO1P53168 247 aaKnown RBP2.46□□□□□ -2.02
SPC29YPL124W RTS3P53289 263 aa2.46□□□□□ -2.02
SPC29YPL124W VPS38Q05919 439 aa2.46□□□□□ -2.02
SPC29YPL124W SGN1P40561 250 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
SPC29YPL124W POP1P41812 875 aa2.45□□□□□ -2.02
SPC29YPL124W CWC25P53854 179 aaKnown RBP2.45□□□□□ -2.02
SPC29YPL124W RAV1P47104 1357 aa2.45□□□□□ -2.02
SPC29YPL124W TOP1P04786 769 aa2.44□□□□□ -2.02
SPC29YPL124W CDC16P09798 840 aa2.44□□□□□ -2.02
SPC29YPL124W NUP2P32499 720 aa2.44□□□□□ -2.02
SPC29YPL124W WBP1P33767 430 aaKnown RBP2.44□□□□□ -2.02
SPC29YPL124W KKQ8P36004 724 aa2.44□□□□□ -2.02
SPC29YPL124W FUI1P38196 639 aa2.44□□□□□ -2.02
SPC29YPL124W LYS14P40971 790 aa2.44□□□□□ -2.02
SPC29YPL124W GAB1P41733 394 aa2.44□□□□□ -2.02
SPC29YPL124W SSU1P41930 458 aa2.44□□□□□ -2.02
SPC29YPL124W SSN8P47821 323 aa2.44□□□□□ -2.02
SPC29YPL124W SOV1Q04748 898 aa2.44□□□□□ -2.02
SPC29YPL124W MRD1Q06106 887 aaKnown RBP2.44□□□□□ -2.02
SPC29YPL124W YJR112W-AQ3E743 109 aa2.44□□□□□ -2.02
SPC29YPL124W TIP1P27654 210 aaPredicted RBP2.43□□□□□ -2.02
SPC29YPL124W ITR1P30605 584 aa2.43□□□□□ -2.02
SPC29YPL124W YMR181CQ03231 154 aa2.43□□□□□ -2.02
SPC29YPL124W OPY2Q06810 360 aa2.43□□□□□ -2.02
SPC29YPL124W CUE5Q08412 411 aaKnown RBP2.43□□□□□ -2.02
SPC29YPL124W MUM3Q08750 479 aa2.43□□□□□ -2.02
SPC29YPL124W AVL9Q12500 764 aa2.43□□□□□ -2.02
SPC29YPL124W TRP1P00912 224 aa2.42□□□□□ -2.02
SPC29YPL124W KAR9P32526 644 aa2.42□□□□□ -2.02
SPC29YPL124W YCR041WP37265 110 aa2.42□□□□□ -2.02
SPC29YPL124W YJR085CP47131 105 aaKnown RBP2.42□□□□□ -2.02
SPC29YPL124W MEP3P53390 489 aa2.42□□□□□ -2.02
SPC29YPL124W CCH1P50077 2039 aa2.42□□□□□ -2.02
SPC29YPL124W CYC3P06182 269 aa2.41□□□□□ -2.02
SPC29YPL124W RPL31BP0C2H9 113 aaKnown RBP2.41□□□□□ -2.02
SPC29YPL124W MRE11P32829 692 aa2.41□□□□□ -2.02
SPC29YPL124W MRPL10P36520 322 aa2.41□□□□□ -2.02
SPC29YPL124W UTP18P40362 594 aaPredicted RBP2.41□□□□□ -2.02
SPC29YPL124W LAM5P43560 674 aa2.41□□□□□ -2.02
SPC29YPL124W OCA1P50946 238 aaPredicted RBP2.41□□□□□ -2.02
SPC29YPL124W YIP1P53039 248 aa2.41□□□□□ -2.02
SPC29YPL124W PPM1Q04081 328 aa2.41□□□□□ -2.02
SPC29YPL124W PDS5Q04264 1277 aa2.41□□□□□ -2.02
SPC29YPL124W IRC25Q07951 179 aa2.41□□□□□ -2.02
SPC29YPL124W HUA2Q12134 243 aa2.41□□□□□ -2.02
SPC29YPL124W PKH2Q12236 1081 aaKnown RBP2.41□□□□□ -2.02
SPC29YPL124W YDL007C-AQ2V2Q0 85 aa2.41□□□□□ -2.02
SPC29YPL124W GAL80P04387 435 aa2.4□□□□□ -2.03
SPC29YPL124W CAF130P53280 1122 aaPredicted RBP2.4□□□□□ -2.03
SPC29YPL124W TAP42Q04372 366 aa2.4□□□□□ -2.03
SPC29YPL124W TIM18Q08749 192 aa2.4□□□□□ -2.03
SPC29YPL124W TRX2P22803 104 aaKnown RBP2.39□□□□□ -2.03
SPC29YPL124W PEP3P27801 918 aa2.39□□□□□ -2.03
SPC29YPL124W SSH4P32343 579 aa2.39□□□□□ -2.03
SPC29YPL124W VID24P38263 362 aa2.39□□□□□ -2.03
SPC29YPL124W YHR131CP38835 850 aa2.39□□□□□ -2.03
SPC29YPL124W YGL108CP53139 140 aa2.39□□□□□ -2.03
SPC29YPL124W IGO1P53897 168 aa2.39□□□□□ -2.03
SPC29YPL124W YMR018WQ04364 514 aa2.39□□□□□ -2.03
SPC29YPL124W PLP2Q12017 286 aa2.39□□□□□ -2.03
SPC29YPL124W YPR022CQ12139 1133 aa2.39□□□□□ -2.03
SPC29YPL124W ATP10P18496 279 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms