RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W PPN1Q04119 674 aa3.53□□□□□ -1.84
MSD1YPL104W DYN3Q04949 312 aa3.53□□□□□ -1.84
MSD1YPL104W RSB1Q08417 382 aa3.53□□□□□ -1.84
MSD1YPL104W BUD7Q08754 746 aa3.53□□□□□ -1.84
MSD1YPL104W YLR049CQ12110 428 aa3.53□□□□□ -1.84
MSD1YPL104W HUA2Q12134 243 aa3.53□□□□□ -1.84
MSD1YPL104W NSL1Q12143 216 aa3.53□□□□□ -1.84
MSD1YPL104W TY1A-BLQ12266 440 aa3.53□□□□□ -1.84
MSD1YPL104W YOL114CQ12322 202 aa3.53□□□□□ -1.84
MSD1YPL104W GTT2Q12390 233 aa3.53□□□□□ -1.84
MSD1YPL104W ATP2P00830 511 aaKnown RBP3.52□□□□□ -1.85
MSD1YPL104W TPK2P06245 380 aa3.52□□□□□ -1.85
MSD1YPL104W GUK1P15454 187 aaKnown RBP3.52□□□□□ -1.85
MSD1YPL104W RFA1P22336 621 aaKnown RBP3.52□□□□□ -1.85
MSD1YPL104W UBA1P22515 1024 aaKnown RBP3.52□□□□□ -1.85
MSD1YPL104W NAR1P23503 491 aaKnown RBP3.52□□□□□ -1.85
MSD1YPL104W CSM1P25651 190 aa3.52□□□□□ -1.85
MSD1YPL104W BRF1P29056 596 aa3.52□□□□□ -1.85
MSD1YPL104W ATP7P30902 174 aa3.52□□□□□ -1.85
MSD1YPL104W SPS19P32573 292 aaKnown RBP3.52□□□□□ -1.85
MSD1YPL104W PRP18P33411 251 aaPredicted RBP3.52□□□□□ -1.85
MSD1YPL104W RPS1AP33442 255 aaKnown RBP3.52□□□□□ -1.85
MSD1YPL104W YKL100CP34248 587 aa3.52□□□□□ -1.85
MSD1YPL104W MDJ1P35191 511 aa3.52□□□□□ -1.85
MSD1YPL104W THI80P35202 319 aa3.52□□□□□ -1.85
MSD1YPL104W LRG1P35688 1017 aa3.52□□□□□ -1.85
MSD1YPL104W SWH1P35845 1188 aa3.52□□□□□ -1.85
MSD1YPL104W DBP8P38719 431 aa3.52□□□□□ -1.85
MSD1YPL104W LRP1P38801 184 aaKnown RBP3.52□□□□□ -1.85
MSD1YPL104W PIK1P39104 1066 aa3.52□□□□□ -1.85
MSD1YPL104W TIM17P39515 158 aa3.52□□□□□ -1.85
MSD1YPL104W RPH1P39956 796 aa3.52□□□□□ -1.85
MSD1YPL104W ARB1P40024 610 aaKnown RBP3.52□□□□□ -1.85
MSD1YPL104W RIO2P40160 425 aaKnown RBP3.52□□□□□ -1.85
MSD1YPL104W NDE1P40215 560 aa3.52□□□□□ -1.85
MSD1YPL104W MET18P40469 1032 aa3.52□□□□□ -1.85
MSD1YPL104W YIL001WP40560 513 aa3.52□□□□□ -1.85
MSD1YPL104W TIS11P47977 285 aa3.52□□□□□ -1.85
MSD1YPL104W MTR3P48240 250 aaPredicted RBP3.52□□□□□ -1.85
MSD1YPL104W EMC4P53073 190 aa3.52□□□□□ -1.85
MSD1YPL104W HOT1Q03213 719 aa3.52□□□□□ -1.85
MSD1YPL104W YMR178WQ03219 274 aaKnown RBP3.52□□□□□ -1.85
MSD1YPL104W TRM12Q04235 462 aa3.52□□□□□ -1.85
MSD1YPL104W SSL1Q04673 461 aaPredicted RBP3.52□□□□□ -1.85
MSD1YPL104W CRR1Q05790 422 aa3.52□□□□□ -1.85
MSD1YPL104W YLR413WQ06689 675 aa3.52□□□□□ -1.85
MSD1YPL104W UAF30Q08747 228 aa3.52□□□□□ -1.85
MSD1YPL104W PER33Q12144 273 aa3.52□□□□□ -1.85
MSD1YPL104W RUP1Q12242 671 aa3.52□□□□□ -1.85
MSD1YPL104W YOR012WQ12351 137 aa3.52□□□□□ -1.85
MSD1YPL104W PDH1Q12428 516 aaKnown RBP3.52□□□□□ -1.85
MSD1YPL104W ADF1Q2V2Q1 113 aa3.52□□□□□ -1.85
MSD1YPL104W TY4B-PA0A0B7P3V8 1104 aa3.52□□□□□ -1.85
MSD1YPL104W DIF1O13577 133 aa3.52□□□□□ -1.85
MSD1YPL104W PHO91P27514 894 aa3.52□□□□□ -1.85
MSD1YPL104W BUD14P27637 709 aa3.52□□□□□ -1.85
MSD1YPL104W TFC1P32367 649 aa3.52□□□□□ -1.85
MSD1YPL104W CSE1P33307 960 aa3.52□□□□□ -1.85
MSD1YPL104W MAC1P35192 417 aa3.52□□□□□ -1.85
MSD1YPL104W NNK1P36003 928 aa3.52□□□□□ -1.85
MSD1YPL104W CAF4P36130 643 aa3.52□□□□□ -1.85
MSD1YPL104W FAT1P38225 669 aa3.52□□□□□ -1.85
MSD1YPL104W FTH1P38310 465 aa3.52□□□□□ -1.85
MSD1YPL104W MED6P38782 295 aa3.52□□□□□ -1.85
MSD1YPL104W PCL5P38794 229 aa3.52□□□□□ -1.85
MSD1YPL104W YER034WP40022 185 aaKnown RBP3.52□□□□□ -1.85
MSD1YPL104W GCD10P41814 478 aa3.52□□□□□ -1.85
MSD1YPL104W OYE3P41816 400 aaPredicted RBP3.52□□□□□ -1.85
MSD1YPL104W SHR5P41912 237 aa3.52□□□□□ -1.85
MSD1YPL104W FMP33P46998 180 aa3.52□□□□□ -1.85
MSD1YPL104W NAS6P50086 228 aa3.52□□□□□ -1.85
MSD1YPL104W LYS5P50113 272 aa3.52□□□□□ -1.85
MSD1YPL104W PRP38Q00723 242 aaPredicted RBP3.52□□□□□ -1.85
MSD1YPL104W HSP31Q04432 237 aa3.52□□□□□ -1.85
MSD1YPL104W SPC2Q04969 178 aa3.52□□□□□ -1.85
MSD1YPL104W BCH1Q05029 724 aa3.52□□□□□ -1.85
MSD1YPL104W ATG26Q06321 1198 aa3.52□□□□□ -1.85
MSD1YPL104W ASA1Q06822 443 aa3.52□□□□□ -1.85
MSD1YPL104W PSR1Q07800 427 aa3.52□□□□□ -1.85
MSD1YPL104W SGT1Q08446 395 aa3.52□□□□□ -1.85
MSD1YPL104W SGO1Q08490 590 aa3.52□□□□□ -1.85
MSD1YPL104W GPB1Q08886 897 aa3.52□□□□□ -1.85
MSD1YPL104W SMF3Q12078 473 aaPredicted RBP3.52□□□□□ -1.85
MSD1YPL104W NHA1Q99271 985 aa3.52□□□□□ -1.85
MSD1YPL104W ATP6P00854 259 aa3.51□□□□□ -1.85
MSD1YPL104W YAR066WP0CX18 203 aa3.51□□□□□ -1.85
MSD1YPL104W YHR214WP0CX19 203 aa3.51□□□□□ -1.85
MSD1YPL104W GCD2P12754 651 aaPredicted RBP3.51□□□□□ -1.85
MSD1YPL104W RSR1P13856 272 aa3.51□□□□□ -1.85
MSD1YPL104W YAK1P14680 807 aa3.51□□□□□ -1.85
MSD1YPL104W SEC63P14906 663 aa3.51□□□□□ -1.85
MSD1YPL104W CCA1P21269 546 aa3.51□□□□□ -1.85
MSD1YPL104W YCK2P23292 546 aaKnown RBP3.51□□□□□ -1.85
MSD1YPL104W CRM1P30822 1084 aaKnown RBP3.51□□□□□ -1.85
MSD1YPL104W DPH5P32469 300 aaPredicted RBP3.51□□□□□ -1.85
MSD1YPL104W YPT52P36018 234 aaKnown RBP3.51□□□□□ -1.85
MSD1YPL104W NPT1P39683 429 aaKnown RBP3.51□□□□□ -1.85
MSD1YPL104W UTP18P40362 594 aaPredicted RBP3.51□□□□□ -1.85
MSD1YPL104W GAT1P43574 510 aa3.51□□□□□ -1.85
MSD1YPL104W RMD8P43620 662 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms