RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W TPM2P40414 161 aa1.11□□□□□ -2.23
SGF11YPL047W DPH1P40487 425 aaKnown RBP1.11□□□□□ -2.23
SGF11YPL047W OST1P41543 476 aaKnown RBP1.11□□□□□ -2.23
SGF11YPL047W TRS85P46944 698 aa1.11□□□□□ -2.23
SGF11YPL047W PDS5Q04264 1277 aa1.11□□□□□ -2.23
SGF11YPL047W VMS1Q04311 632 aaKnown RBP1.11□□□□□ -2.23
SGF11YPL047W MRD1Q06106 887 aaKnown RBP1.11□□□□□ -2.23
SGF11YPL047W YPR091CQ06833 770 aa1.11□□□□□ -2.23
SGF11YPL047W IES4Q08561 116 aa1.11□□□□□ -2.23
SGF11YPL047W SSP2Q08646 371 aa1.11□□□□□ -2.23
SGF11YPL047W YPS3Q12303 508 aa1.11□□□□□ -2.23
SGF11YPL047W RKM5Q12367 367 aa1.11□□□□□ -2.23
SGF11YPL047W YPT6Q99260 215 aa1.11□□□□□ -2.23
SGF11YPL047W SGS1P35187 1447 aa1.1□□□□□ -2.23
SGF11YPL047W MES1P00958 751 aaKnown RBP1.1□□□□□ -2.23
SGF11YPL047W PRB1P09232 635 aa1.1□□□□□ -2.23
SGF11YPL047W SAM1P10659 382 aaKnown RBP1.1□□□□□ -2.23
SGF11YPL047W SAM2P19358 384 aaKnown RBP1.1□□□□□ -2.23
SGF11YPL047W POL4P25615 582 aa1.1□□□□□ -2.23
SGF11YPL047W NUP2P32499 720 aa1.1□□□□□ -2.23
SGF11YPL047W VPS24P36095 224 aaKnown RBP1.1□□□□□ -2.23
SGF11YPL047W TCD2P36101 447 aaKnown RBP1.1□□□□□ -2.23
SGF11YPL047W YBL029WP38201 376 aa1.1□□□□□ -2.23
SGF11YPL047W BMT2P38278 337 aa1.1□□□□□ -2.23
SGF11YPL047W MSG5P38590 489 aa1.1□□□□□ -2.23
SGF11YPL047W MBB1P39534 108 aa1.1□□□□□ -2.23
SGF11YPL047W MST28P39552 234 aa1.1□□□□□ -2.23
SGF11YPL047W AFG3P39925 761 aa1.1□□□□□ -2.23
SGF11YPL047W YMR147WP40218 223 aaKnown RBP1.1□□□□□ -2.23
SGF11YPL047W SYG1P40528 902 aa1.1□□□□□ -2.23
SGF11YPL047W GAB1P41733 394 aa1.1□□□□□ -2.23
SGF11YPL047W YGR066CP53242 292 aa1.1□□□□□ -2.23
SGF11YPL047W MTM1P53320 366 aa1.1□□□□□ -2.23
SGF11YPL047W CWC25P53854 179 aaKnown RBP1.1□□□□□ -2.23
SGF11YPL047W YMR181CQ03231 154 aa1.1□□□□□ -2.23
SGF11YPL047W VHS1Q03785 461 aa1.1□□□□□ -2.23
SGF11YPL047W ATG16Q03818 150 aa1.1□□□□□ -2.23
SGF11YPL047W ECM11Q04110 302 aa1.1□□□□□ -2.23
SGF11YPL047W RPC11Q04307 110 aaPredicted RBP1.1□□□□□ -2.23
SGF11YPL047W YPQ1Q12010 308 aa1.1□□□□□ -2.23
SGF11YPL047W LEU4P06208 619 aaKnown RBP1.09□□□□□ -2.23
SGF11YPL047W CDC16P09798 840 aa1.09□□□□□ -2.23
SGF11YPL047W YAR066WP0CX18 203 aa1.09□□□□□ -2.23
SGF11YPL047W YHR214WP0CX19 203 aa1.09□□□□□ -2.23
SGF11YPL047W RPS8AP0CX39 200 aaKnown RBP1.09□□□□□ -2.23
SGF11YPL047W RPS8BP0CX40 200 aaKnown RBP1.09□□□□□ -2.23
SGF11YPL047W KAR9P32526 644 aa1.09□□□□□ -2.23
SGF11YPL047W MRE11P32829 692 aa1.09□□□□□ -2.23
SGF11YPL047W WBP1P33767 430 aaKnown RBP1.09□□□□□ -2.23
SGF11YPL047W NOP4P37838 685 aaKnown RBP1.09□□□□□ -2.23
SGF11YPL047W RIB5P38145 238 aa1.09□□□□□ -2.23
SGF11YPL047W ISC1P40015 477 aaKnown RBP1.09□□□□□ -2.23
SGF11YPL047W YJR085CP47131 105 aaKnown RBP1.09□□□□□ -2.23
SGF11YPL047W IMD4P50094 524 aaKnown RBP1.09□□□□□ -2.23
SGF11YPL047W YML131WQ03102 365 aa1.09□□□□□ -2.23
SGF11YPL047W YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
SGF11YPL047W IRC25Q07951 179 aa1.09□□□□□ -2.23
SGF11YPL047W CUE5Q08412 411 aaKnown RBP1.09□□□□□ -2.23
SGF11YPL047W AVL9Q12500 764 aa1.09□□□□□ -2.23
SGF11YPL047W YJR112W-AQ3E743 109 aa1.09□□□□□ -2.23
SGF11YPL047W YBR126W-AQ8TGU7 68 aa1.09□□□□□ -2.23
SGF11YPL047W RAV1P47104 1357 aa1.08□□□□□ -2.24
SGF11YPL047W SEM1O94742 89 aa1.08□□□□□ -2.24
SGF11YPL047W DFR1P07807 211 aaKnown RBP RIP-Chip data1.08□□□□□ -2.24not detected
SGF11YPL047W NFT1P0CE68 1218 aa1.08□□□□□ -2.24
SGF11YPL047W TIP1P27654 210 aaPredicted RBP1.08□□□□□ -2.24
SGF11YPL047W CBP4P37267 147 aa1.08□□□□□ -2.24
SGF11YPL047W YHR131CP38835 850 aa1.08□□□□□ -2.24
SGF11YPL047W UTP18P40362 594 aaPredicted RBP1.08□□□□□ -2.24
SGF11YPL047W BRO1P48582 844 aa1.08□□□□□ -2.24
SGF11YPL047W DUO1P53168 247 aaKnown RBP1.08□□□□□ -2.24
SGF11YPL047W IPI3P53877 555 aa1.08□□□□□ -2.24
SGF11YPL047W NCS2P53923 493 aaPredicted RBP1.08□□□□□ -2.24
SGF11YPL047W HXT11P54862 567 aa1.08□□□□□ -2.24
SGF11YPL047W NGL3Q03210 505 aa1.08□□□□□ -2.24
SGF11YPL047W IOC4Q04213 475 aa1.08□□□□□ -2.24
SGF11YPL047W TAP42Q04372 366 aa1.08□□□□□ -2.24
SGF11YPL047W VPS38Q05919 439 aa1.08□□□□□ -2.24
SGF11YPL047W MUM3Q08750 479 aa1.08□□□□□ -2.24
SGF11YPL047W CTI6Q08923 506 aa1.08□□□□□ -2.24
SGF11YPL047W PLP2Q12017 286 aa1.08□□□□□ -2.24
SGF11YPL047W RLM1Q12224 676 aa1.08□□□□□ -2.24
SGF11YPL047W PKH2Q12236 1081 aaKnown RBP1.08□□□□□ -2.24
SGF11YPL047W RRD2Q12461 358 aa1.08□□□□□ -2.24
SGF11YPL047W SEC39Q12745 709 aa1.08□□□□□ -2.24
SGF11YPL047W YDL007C-AQ2V2Q0 85 aa1.08□□□□□ -2.24
SGF11YPL047W RHO2P06781 192 aa1.07□□□□□ -2.24
SGF11YPL047W RPL31BP0C2H9 113 aaKnown RBP1.07□□□□□ -2.24
SGF11YPL047W EST1P17214 699 aaPredicted RBP1.07□□□□□ -2.24
SGF11YPL047W PEP3P27801 918 aa1.07□□□□□ -2.24
SGF11YPL047W SEC66P33754 206 aa1.07□□□□□ -2.24
SGF11YPL047W ARA1P38115 344 aa1.07□□□□□ -2.24
SGF11YPL047W MRPS9P38120 278 aa1.07□□□□□ -2.24
SGF11YPL047W KEL1P38853 1164 aaKnown RBP1.07□□□□□ -2.24
SGF11YPL047W SEO1P39709 593 aa1.07□□□□□ -2.24
SGF11YPL047W MET28P40573 187 aa1.07□□□□□ -2.24
SGF11YPL047W CHS6P40955 746 aa1.07□□□□□ -2.24
SGF11YPL047W LAM5P43560 674 aa1.07□□□□□ -2.24
SGF11YPL047W OCA1P50946 238 aaPredicted RBP1.07□□□□□ -2.24
SGF11YPL047W MEP3P53390 489 aa1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms