RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C NDE2Q07500 545 aa9.36□□□□□ -0.91
SSN3YPL042C SLD7Q08457 257 aa9.36□□□□□ -0.91
SSN3YPL042C ESA1Q08649 445 aa9.36□□□□□ -0.91
SSN3YPL042C RPN8Q08723 338 aaKnown RBP9.36□□□□□ -0.91
SSN3YPL042C TGL5Q12043 749 aa9.36□□□□□ -0.91
SSN3YPL042C LEU9Q12166 604 aaKnown RBP9.36□□□□□ -0.91
SSN3YPL042C HTZ1Q12692 134 aaKnown RBP9.36□□□□□ -0.91
SSN3YPL042C DAP2P18962 818 aa9.35□□□□□ -0.91
SSN3YPL042C PPH22P23595 377 aa9.35□□□□□ -0.91
SSN3YPL042C MRPL17P36528 281 aa9.35□□□□□ -0.91
SSN3YPL042C SSP120P39931 234 aaKnown RBP9.35□□□□□ -0.91
SSN3YPL042C LCB5Q06147 687 aaKnown RBP9.35□□□□□ -0.91
SSN3YPL042C SGO1Q08490 590 aa9.35□□□□□ -0.91
SSN3YPL042C GAL4P04386 881 aa9.34□□□□□ -0.91
SSN3YPL042C SIR3P06701 978 aa9.34□□□□□ -0.91
SSN3YPL042C KGD1P20967 1014 aaKnown RBP9.34□□□□□ -0.91
SSN3YPL042C AAT2P23542 418 aaKnown RBP9.34□□□□□ -0.91
SSN3YPL042C YJU3P28321 313 aa9.34□□□□□ -0.91
SSN3YPL042C MKK2P32491 506 aa9.34□□□□□ -0.91
SSN3YPL042C SEC66P33754 206 aa9.34□□□□□ -0.91
SSN3YPL042C BET3P36149 193 aa9.34□□□□□ -0.91
SSN3YPL042C ADH5P38113 351 aaKnown RBP9.34□□□□□ -0.91
SSN3YPL042C YBR062CP38239 180 aa9.34□□□□□ -0.91
SSN3YPL042C YHR097CP38809 366 aaKnown RBP9.34□□□□□ -0.91
SSN3YPL042C MGS1P40151 587 aa9.34□□□□□ -0.91
SSN3YPL042C IST3P40565 148 aaPredicted RBP9.34□□□□□ -0.91
SSN3YPL042C RAI1P53063 387 aaKnown RBP9.34□□□□□ -0.91
SSN3YPL042C STR3P53101 465 aaKnown RBP9.34□□□□□ -0.91
SSN3YPL042C TIM13P53299 105 aa9.34□□□□□ -0.91
SSN3YPL042C CDC14Q00684 551 aa9.34□□□□□ -0.91
SSN3YPL042C DFG5Q05031 458 aa9.34□□□□□ -0.91
SSN3YPL042C CDC123Q05791 360 aa9.34□□□□□ -0.91
SSN3YPL042C YCS4Q06156 1176 aa9.34□□□□□ -0.91
SSN3YPL042C HBT1Q07653 1046 aaKnown RBP9.34□□□□□ -0.91
SSN3YPL042C RTN2Q12443 393 aa9.34□□□□□ -0.91
SSN3YPL042C ACO1P19414 778 aaKnown RBP RIP-Chip data9.33□□□□□ -0.92not detected
SSN3YPL042C ARE1P25628 610 aa9.33□□□□□ -0.92
SSN3YPL042C CYM1P32898 989 aa9.33□□□□□ -0.92
SSN3YPL042C DUT1P33317 147 aa9.33□□□□□ -0.92
SSN3YPL042C MAE1P36013 669 aaKnown RBP9.33□□□□□ -0.92
SSN3YPL042C OSH7P38755 437 aa9.33□□□□□ -0.92
SSN3YPL042C GDH3P39708 457 aa9.33□□□□□ -0.92
SSN3YPL042C CAB2P40506 365 aa9.33□□□□□ -0.92
SSN3YPL042C ARC35P53731 342 aaKnown RBP9.33□□□□□ -0.92
SSN3YPL042C RAD30Q04049 632 aa9.33□□□□□ -0.92
SSN3YPL042C KCS1Q12494 1050 aa9.33□□□□□ -0.92
SSN3YPL042C MTR10Q99189 972 aa9.33□□□□□ -0.92
SSN3YPL042C YCK2P23292 546 aaKnown RBP9.32□□□□□ -0.92
SSN3YPL042C SYP1P25623 870 aaKnown RBP9.32□□□□□ -0.92
SSN3YPL042C IMG2P25642 146 aaPredicted RBP9.32□□□□□ -0.92
SSN3YPL042C GDA1P32621 518 aa9.32□□□□□ -0.92
SSN3YPL042C SLC1P33333 303 aa9.32□□□□□ -0.92
SSN3YPL042C NTA1P40354 457 aa9.32□□□□□ -0.92
SSN3YPL042C PFK26P40433 827 aaKnown RBP9.32□□□□□ -0.92
SSN3YPL042C UTP25P40498 721 aaKnown RBP9.32□□□□□ -0.92
SSN3YPL042C LSB6P42951 607 aa9.32□□□□□ -0.92
SSN3YPL042C YNL035CP53962 389 aaKnown RBP9.32□□□□□ -0.92
SSN3YPL042C YPL014WQ02606 381 aa9.32□□□□□ -0.92
SSN3YPL042C YLR413WQ06689 675 aa9.32□□□□□ -0.92
SSN3YPL042C LDB18Q07887 179 aa9.32□□□□□ -0.92
SSN3YPL042C BUD20Q08004 166 aaPredicted RBP9.32□□□□□ -0.92
SSN3YPL042C PUS9Q12069 462 aa9.32□□□□□ -0.92
SSN3YPL042C HAL9Q12180 1030 aa9.32□□□□□ -0.92
SSN3YPL042C ERG20P08524 352 aaKnown RBP9.32□□□□□ -0.92
SSN3YPL042C MRPS28P21771 286 aa9.32□□□□□ -0.92
SSN3YPL042C ATP12P22135 325 aa9.32□□□□□ -0.92
SSN3YPL042C CMK2P22517 447 aa9.32□□□□□ -0.92
SSN3YPL042C HRR25P29295 494 aaKnown RBP9.32□□□□□ -0.92
SSN3YPL042C RIM1P32445 135 aaKnown RBP9.32□□□□□ -0.92
SSN3YPL042C STP2P38704 541 aa9.32□□□□□ -0.92
SSN3YPL042C AXL2P38928 823 aa9.32□□□□□ -0.92
SSN3YPL042C PEP8P40335 379 aa9.32□□□□□ -0.92
SSN3YPL042C MOB1P40484 314 aa9.32□□□□□ -0.92
SSN3YPL042C RTS2P40962 232 aa9.32□□□□□ -0.92
SSN3YPL042C LSM1P47017 172 aaKnown RBP9.32□□□□□ -0.92
SSN3YPL042C TMA22P47089 198 aaPredicted RBP9.32□□□□□ -0.92
SSN3YPL042C MPP6P53725 186 aaPredicted RBP9.32□□□□□ -0.92
SSN3YPL042C PDR16P53860 351 aaKnown RBP9.32□□□□□ -0.92
SSN3YPL042C VAC7P53950 1165 aa9.32□□□□□ -0.92
SSN3YPL042C YMR206WQ03695 313 aa9.32□□□□□ -0.92
SSN3YPL042C RRP12Q12754 1228 aaKnown RBP9.32□□□□□ -0.92
SSN3YPL042C PDE2P06776 526 aa9.31□□□□□ -0.92
SSN3YPL042C HSP26P15992 214 aaKnown RBP RIP-Chip data9.31□□□□□ -0.92not detected
SSN3YPL042C DAL3P32459 195 aa9.31□□□□□ -0.92
SSN3YPL042C SEC61P32915 480 aa9.31□□□□□ -0.92
SSN3YPL042C GLG1P36143 616 aa9.31□□□□□ -0.92
SSN3YPL042C MUP3P38734 546 aa9.31□□□□□ -0.92
SSN3YPL042C YJL206CP39529 758 aa9.31□□□□□ -0.92
SSN3YPL042C QRI1P43123 477 aaKnown RBP9.31□□□□□ -0.92
SSN3YPL042C BUD13P46947 266 aaPredicted RBP9.31□□□□□ -0.92
SSN3YPL042C HAM1P47119 197 aaKnown RBP9.31□□□□□ -0.92
SSN3YPL042C OKP1P53298 406 aa9.31□□□□□ -0.92
SSN3YPL042C BUD32P53323 261 aa9.31□□□□□ -0.92
SSN3YPL042C OGG1P53397 376 aaPredicted RBP9.31□□□□□ -0.92
SSN3YPL042C LEE1Q02799 301 aaKnown RBP9.31□□□□□ -0.92
SSN3YPL042C SRL4Q03085 281 aa9.31□□□□□ -0.92
SSN3YPL042C TRS31Q03337 283 aa9.31□□□□□ -0.92
SSN3YPL042C NDD1Q08887 554 aa9.31□□□□□ -0.92
SSN3YPL042C GUP2Q08929 609 aa9.31□□□□□ -0.92
SSN3YPL042C SPE4Q12455 300 aa9.31□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 75.7 ms