RNA–Protein interactions for RNA: YOL129W

VPS68, Transcript of Vacuolar membrane protein of unknown function, yeast

Gene VPS68, Length 555 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS68	YOL129W	SAN1	P22470	610 aa		4.56	□□□□□ -1.68
VPS68	YOL129W	RME1	P32338	300 aa	Known RBP	4.56	□□□□□ -1.68
VPS68	YOL129W	EBP2	P36049	427 aa	Known RBP	4.56	□□□□□ -1.68
VPS68	YOL129W	YKL023W	P36103	277 aa	Known RBP	4.56	□□□□□ -1.68
VPS68	YOL129W	JNM1	P36224	373 aa		4.56	□□□□□ -1.68
VPS68	YOL129W	PHO90	P39535	881 aa		4.56	□□□□□ -1.68
VPS68	YOL129W	NOP16	P40007	231 aa	Known RBP	4.56	□□□□□ -1.68
VPS68	YOL129W	ALD5	P40047	520 aa	Known RBP	4.56	□□□□□ -1.68
VPS68	YOL129W	YFL040W	P43562	540 aa		4.56	□□□□□ -1.68
VPS68	YOL129W	SGM1	P47166	707 aa		4.56	□□□□□ -1.68
VPS68	YOL129W	AZR1	P50080	613 aa		4.56	□□□□□ -1.68
VPS68	YOL129W	SHE10	P53075	577 aa		4.56	□□□□□ -1.68
VPS68	YOL129W	NUP100	Q02629	959 aa		4.56	□□□□□ -1.68
VPS68	YOL129W	EBS1	Q03466	884 aa	Known RBP	4.56	□□□□□ -1.68
VPS68	YOL129W	TSR2	Q06672	205 aa	Known RBP	4.56	□□□□□ -1.68
VPS68	YOL129W	YDL057W	Q07379	328 aa		4.56	□□□□□ -1.68
VPS68	YOL129W	IES4	Q08561	116 aa		4.56	□□□□□ -1.68
VPS68	YOL129W	BSC1	Q12140	328 aa		4.56	□□□□□ -1.68
VPS68	YOL129W	DPH2	P32461	534 aa		4.55	□□□□□ -1.68
VPS68	YOL129W	MUD1	P32605	298 aa	Known RBP	4.55	□□□□□ -1.68
VPS68	YOL129W	NIP100	P33420	868 aa		4.55	□□□□□ -1.68
VPS68	YOL129W	RPC25	P35718	212 aa		4.55	□□□□□ -1.68
VPS68	YOL129W	YET1	P35723	206 aa		4.55	□□□□□ -1.68
VPS68	YOL129W	DRE2	P36152	348 aa		4.55	□□□□□ -1.68
VPS68	YOL129W	TSC10	P38342	320 aa		4.55	□□□□□ -1.68
VPS68	YOL129W	AFG3	P39925	761 aa		4.55	□□□□□ -1.68
VPS68	YOL129W	MEP2	P41948	499 aa		4.55	□□□□□ -1.68
VPS68	YOL129W	AIP1	P46680	615 aa	Known RBP	4.55	□□□□□ -1.68
VPS68	YOL129W	YNL146W	P53906	100 aa		4.55	□□□□□ -1.68
VPS68	YOL129W	YNL134C	P53912	376 aa	Known RBP	4.55	□□□□□ -1.68
VPS68	YOL129W	ARK1	P53974	638 aa		4.55	□□□□□ -1.68
VPS68	YOL129W	TIM8	P57744	87 aa		4.55	□□□□□ -1.68
VPS68	YOL129W	YLR287C	Q05881	355 aa		4.55	□□□□□ -1.68
VPS68	YOL129W	SHS1	Q07657	551 aa		4.55	□□□□□ -1.68
VPS68	YOL129W	YOL075C	Q08234	1294 aa		4.55	□□□□□ -1.68
VPS68	YOL129W	TCO89	Q08921	799 aa		4.55	□□□□□ -1.68
VPS68	YOL129W	SPE4	Q12455	300 aa		4.55	□□□□□ -1.68
VPS68	YOL129W	AAC3	P18238	307 aa		4.54	□□□□□ -1.68
VPS68	YOL129W	VMA16	P23968	213 aa		4.54	□□□□□ -1.68
VPS68	YOL129W	SYN8	P31377	255 aa		4.54	□□□□□ -1.68
VPS68	YOL129W	MMS4	P38257	691 aa		4.54	□□□□□ -1.68
VPS68	YOL129W	CTM1	P38818	585 aa		4.54	□□□□□ -1.68
VPS68	YOL129W	UBA4	P38820	440 aa		4.54	□□□□□ -1.68
VPS68	YOL129W	NDE1	P40215	560 aa		4.54	□□□□□ -1.68
VPS68	YOL129W	IAH1	P41734	238 aa		4.54	□□□□□ -1.68
VPS68	YOL129W	LAM5	P43560	674 aa		4.54	□□□□□ -1.68
VPS68	YOL129W	HSH155	P49955	971 aa	Known RBP	4.54	□□□□□ -1.68
VPS68	YOL129W	CAF130	P53280	1122 aa	Predicted RBP	4.54	□□□□□ -1.68
VPS68	YOL129W	NGL3	Q03210	505 aa		4.54	□□□□□ -1.68
VPS68	YOL129W	EMI2	Q04409	500 aa	Known RBP	4.54	□□□□□ -1.68
VPS68	YOL129W	FMP42	Q04991	504 aa		4.54	□□□□□ -1.68
VPS68	YOL129W	DON1	Q05610	365 aa		4.54	□□□□□ -1.68
VPS68	YOL129W	YPR078C	Q06813	372 aa		4.54	□□□□□ -1.68
VPS68	YOL129W	GRC3	Q07845	632 aa		4.54	□□□□□ -1.68
VPS68	YOL129W	RLP24	Q07915	199 aa	Known RBP	4.54	□□□□□ -1.68
VPS68	YOL129W	YPL272C	Q08984	517 aa		4.54	□□□□□ -1.68
VPS68	YOL129W	YDR524C-B	Q3E6R4	66 aa		4.54	□□□□□ -1.68
VPS68	YOL129W	ARD1	P07347	238 aa	Predicted RBP	4.53	□□□□□ -1.68
VPS68	YOL129W	HNM1	P19807	563 aa		4.53	□□□□□ -1.68
VPS68	YOL129W	KGD1	P20967	1014 aa	Known RBP	4.53	□□□□□ -1.68
VPS68	YOL129W	GID7	P25569	745 aa		4.53	□□□□□ -1.68
VPS68	YOL129W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
VPS68	YOL129W	LCL3	P53153	274 aa		4.53	□□□□□ -1.68
VPS68	YOL129W	DUO1	P53168	247 aa	Known RBP	4.53	□□□□□ -1.68
VPS68	YOL129W	VPS75	P53853	264 aa		4.53	□□□□□ -1.68
VPS68	YOL129W	RSF1	Q05043	376 aa		4.53	□□□□□ -1.68
VPS68	YOL129W	ECM30	Q06673	1274 aa		4.53	□□□□□ -1.68
VPS68	YOL129W	TEN1	Q07921	160 aa		4.53	□□□□□ -1.68
VPS68	YOL129W	SDH5	Q08230	162 aa		4.53	□□□□□ -1.68
VPS68	YOL129W	RDR1	Q08904	546 aa		4.53	□□□□□ -1.68
VPS68	YOL129W	HUA2	Q12134	243 aa		4.53	□□□□□ -1.68
VPS68	YOL129W	SEM1	O94742	89 aa		4.52	□□□□□ -1.69
VPS68	YOL129W	BAR1	P12630	587 aa		4.52	□□□□□ -1.69
VPS68	YOL129W	NAT1	P12945	854 aa	Known RBP	4.52	□□□□□ -1.69
VPS68	YOL129W	YCK1	P23291	538 aa		4.52	□□□□□ -1.69
VPS68	YOL129W	POL4	P25615	582 aa		4.52	□□□□□ -1.69
VPS68	YOL129W	SPC110	P32380	944 aa		4.52	□□□□□ -1.69
VPS68	YOL129W	SWI3	P32591	825 aa		4.52	□□□□□ -1.69
VPS68	YOL129W	MFT1	P33441	392 aa	Known RBP	4.52	□□□□□ -1.69
VPS68	YOL129W	AUR1	P36107	401 aa	Predicted RBP	4.52	□□□□□ -1.69
VPS68	YOL129W	DBP8	P38719	431 aa		4.52	□□□□□ -1.69
VPS68	YOL129W	SMC2	P38989	1170 aa	Known RBP	4.52	□□□□□ -1.69
VPS68	YOL129W	MNP1	P53163	194 aa	Predicted RBP	4.52	□□□□□ -1.69
VPS68	YOL129W	ALG11	P53954	548 aa	Known RBP	4.52	□□□□□ -1.69
VPS68	YOL129W	RSM23	Q01163	450 aa		4.52	□□□□□ -1.69
VPS68	YOL129W	DPB4	Q04603	196 aa	Known RBP	4.52	□□□□□ -1.69
VPS68	YOL129W	ECM7	Q06200	448 aa		4.52	□□□□□ -1.69
VPS68	YOL129W	NDD1	Q08887	554 aa		4.52	□□□□□ -1.69
VPS68	YOL129W	PLP2	Q12017	286 aa		4.52	□□□□□ -1.69
VPS68	YOL129W	LEU9	Q12166	604 aa	Known RBP	4.52	□□□□□ -1.69
VPS68	YOL129W	RIF1	P29539	1916 aa		4.51	□□□□□ -1.69
VPS68	YOL129W	ADE4	P04046	510 aa	Known RBP	4.51	□□□□□ -1.69
VPS68	YOL129W	PUT2	P07275	575 aa		4.51	□□□□□ -1.69
VPS68	YOL129W	ADH7	P25377	361 aa		4.51	□□□□□ -1.69
VPS68	YOL129W	GCS1	P35197	352 aa		4.51	□□□□□ -1.69
VPS68	YOL129W	AGP2	P38090	596 aa		4.51	□□□□□ -1.69
VPS68	YOL129W	YBL029W	P38201	376 aa		4.51	□□□□□ -1.69
VPS68	YOL129W	ESL1	P40456	1118 aa		4.51	□□□□□ -1.69
VPS68	YOL129W	LCB2	P40970	561 aa		4.51	□□□□□ -1.69
VPS68	YOL129W	SAD1	P43589	448 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms