RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeast

Gene CUE1, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE1	YMR264W	TYR1	P20049	452 aa		11.47	□□□□□ -0.57
CUE1	YMR264W	SIS1	P25294	352 aa	Known RBP	11.47	□□□□□ -0.57
CUE1	YMR264W	VPS21	P36017	210 aa	Known RBP	11.47	□□□□□ -0.57
CUE1	YMR264W	EMC3	P36039	253 aa		11.47	□□□□□ -0.57
CUE1	YMR264W	GIM4	P40005	111 aa	Known RBP	11.47	□□□□□ -0.57
CUE1	YMR264W	NDE1	P40215	560 aa		11.47	□□□□□ -0.57
CUE1	YMR264W	ARF3	P40994	183 aa	RIP-Chip data	11.47	□□□□□ -0.57	not detected
CUE1	YMR264W	MTO1	P53070	669 aa		11.47	□□□□□ -0.57
CUE1	YMR264W	RAD30	Q04049	632 aa		11.47	□□□□□ -0.57
CUE1	YMR264W	NSE1	Q07913	336 aa		11.47	□□□□□ -0.57
CUE1	YMR264W	TRM8	Q12009	286 aa		11.47	□□□□□ -0.57
CUE1	YMR264W	BRR1	Q99177	341 aa	Predicted RBP	11.47	□□□□□ -0.57
CUE1	YMR264W	CTR86	P25355	563 aa		11.46	□□□□□ -0.57
CUE1	YMR264W	SAC1	P32368	623 aa	Known RBP	11.46	□□□□□ -0.57
CUE1	YMR264W	DEF1	P35732	738 aa	Known RBP	11.46	□□□□□ -0.57
CUE1	YMR264W	YKR015C	P36111	568 aa		11.46	□□□□□ -0.57
CUE1	YMR264W	RIB1	P38066	345 aa		11.46	□□□□□ -0.57
CUE1	YMR264W	UBP14	P38237	781 aa	Known RBP	11.46	□□□□□ -0.57
CUE1	YMR264W	TAE1	P38340	232 aa		11.46	□□□□□ -0.57
CUE1	YMR264W	YBR285W	P38354	144 aa		11.46	□□□□□ -0.57
CUE1	YMR264W	RCK1	P38622	512 aa		11.46	□□□□□ -0.57
CUE1	YMR264W	RSP5	P39940	809 aa	Known RBP	11.46	□□□□□ -0.57
CUE1	YMR264W	YEL073C	P39974	107 aa		11.46	□□□□□ -0.57
CUE1	YMR264W	TOM22	P49334	152 aa		11.46	□□□□□ -0.57
CUE1	YMR264W	NBP35	P52920	328 aa		11.46	□□□□□ -0.57
CUE1	YMR264W	GOR1	P53839	350 aa		11.46	□□□□□ -0.57
CUE1	YMR264W	BNI4	P53858	892 aa		11.46	□□□□□ -0.57
CUE1	YMR264W	ARG7	Q04728	441 aa		11.46	□□□□□ -0.57
CUE1	YMR264W	THP1	Q08231	455 aa		11.46	□□□□□ -0.57
CUE1	YMR264W	NMD4	Q12129	218 aa		11.46	□□□□□ -0.57
CUE1	YMR264W	WTM1	Q12363	437 aa	Known RBP	11.46	□□□□□ -0.57
CUE1	YMR264W	MDM12	Q92328	271 aa		11.46	□□□□□ -0.57
CUE1	YMR264W	CCH1	P50077	2039 aa		11.46	□□□□□ -0.57
CUE1	YMR264W	TIM9	O74700	87 aa		11.45	□□□□□ -0.58
CUE1	YMR264W	LEU4	P06208	619 aa	Known RBP	11.45	□□□□□ -0.58
CUE1	YMR264W	YKR104W	P0CE69	306 aa		11.45	□□□□□ -0.58
CUE1	YMR264W	RDS2	P19541	446 aa	Known RBP	11.45	□□□□□ -0.58
CUE1	YMR264W	URE2	P23202	354 aa	Known RBP	11.45	□□□□□ -0.58
CUE1	YMR264W	TFB1	P32776	642 aa		11.45	□□□□□ -0.58
CUE1	YMR264W	YHR078W	P38799	552 aa		11.45	□□□□□ -0.58
CUE1	YMR264W	YPT35	P38815	214 aa	Known RBP	11.45	□□□□□ -0.58
CUE1	YMR264W	MNN9	P39107	395 aa	Known RBP	11.45	□□□□□ -0.58
CUE1	YMR264W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	11.45	□□□□□ -0.58	not detected
CUE1	YMR264W	ARE2	P53629	642 aa	Known RBP	11.45	□□□□□ -0.58
CUE1	YMR264W	AQR1	P53943	586 aa		11.45	□□□□□ -0.58
CUE1	YMR264W	SMP3	Q04174	516 aa		11.45	□□□□□ -0.58
CUE1	YMR264W	RSA3	Q05942	220 aa	Known RBP	11.45	□□□□□ -0.58
CUE1	YMR264W	VPS74	Q06385	345 aa		11.45	□□□□□ -0.58
CUE1	YMR264W	RPP1B	P10622	106 aa	Known RBP	11.44	□□□□□ -0.58
CUE1	YMR264W	KSS1	P14681	368 aa		11.44	□□□□□ -0.58
CUE1	YMR264W	GUT1	P32190	709 aa		11.44	□□□□□ -0.58
CUE1	YMR264W	SPO23	P33757	523 aa		11.44	□□□□□ -0.58
CUE1	YMR264W	MAC1	P35192	417 aa		11.44	□□□□□ -0.58
CUE1	YMR264W	LHS1	P36016	881 aa		11.44	□□□□□ -0.58
CUE1	YMR264W	YBR138C	P38277	524 aa		11.44	□□□□□ -0.58
CUE1	YMR264W	ATP22	P50273	684 aa	Predicted RBP	11.44	□□□□□ -0.58
CUE1	YMR264W	MUP1	P50276	574 aa		11.44	□□□□□ -0.58
CUE1	YMR264W	NPY1	P53164	384 aa		11.44	□□□□□ -0.58
CUE1	YMR264W	YDR179W-A	Q03983	463 aa		11.44	□□□□□ -0.58
CUE1	YMR264W	ENT2	Q05785	613 aa		11.44	□□□□□ -0.58
CUE1	YMR264W	PUS7	Q08647	676 aa	Known RBP	11.44	□□□□□ -0.58
CUE1	YMR264W	MPD2	Q99316	277 aa		11.44	□□□□□ -0.58
CUE1	YMR264W	RPS14A	P06367	137 aa	Known RBP	11.43	□□□□□ -0.58
CUE1	YMR264W	GPH1	P06738	902 aa	Known RBP	11.43	□□□□□ -0.58
CUE1	YMR264W	GAL3	P13045	520 aa		11.43	□□□□□ -0.58
CUE1	YMR264W	TRX3	P25372	127 aa		11.43	□□□□□ -0.58
CUE1	YMR264W	RPC82	P32349	654 aa		11.43	□□□□□ -0.58
CUE1	YMR264W	SLX5	P32828	619 aa	Known RBP	11.43	□□□□□ -0.58
CUE1	YMR264W	CBP4	P37267	147 aa		11.43	□□□□□ -0.58
CUE1	YMR264W	APE4	P38821	490 aa		11.43	□□□□□ -0.58
CUE1	YMR264W	RPS14B	P39516	138 aa	Known RBP	11.43	□□□□□ -0.58
CUE1	YMR264W	COS12	P53053	380 aa		11.43	□□□□□ -0.58
CUE1	YMR264W	YMR099C	Q03161	297 aa	Known RBP	11.43	□□□□□ -0.58
CUE1	YMR264W	ARR1	Q06596	294 aa		11.43	□□□□□ -0.58
CUE1	YMR264W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	11.43	□□□□□ -0.58	not detected
CUE1	YMR264W	VPS68	Q12016	184 aa		11.43	□□□□□ -0.58
CUE1	YMR264W	STT4	P37297	1900 aa		11.43	□□□□□ -0.58
CUE1	YMR264W	MGM101	P32787	269 aa	Known RBP	11.42	□□□□□ -0.58
CUE1	YMR264W	TSL1	P38427	1098 aa	Known RBP	11.42	□□□□□ -0.58
CUE1	YMR264W	CCT6	P39079	546 aa		11.42	□□□□□ -0.58
CUE1	YMR264W	MSS2	P40990	351 aa		11.42	□□□□□ -0.58
CUE1	YMR264W	YFR020W	P43600	232 aa		11.42	□□□□□ -0.58
CUE1	YMR264W	BIR1	P47134	954 aa		11.42	□□□□□ -0.58
CUE1	YMR264W	KXD1	P53158	218 aa		11.42	□□□□□ -0.58
CUE1	YMR264W	GYP1	Q08484	637 aa		11.42	□□□□□ -0.58
CUE1	YMR264W	YDL199C	Q12407	687 aa		11.42	□□□□□ -0.58
CUE1	YMR264W	Q0182	Q9ZZW1	134 aa		11.42	□□□□□ -0.58
CUE1	YMR264W	YPR096C	O13587	100 aa		11.41	□□□□□ -0.58
CUE1	YMR264W	HTA1	P04911	132 aa	Known RBP	11.41	□□□□□ -0.58
CUE1	YMR264W	RPS21A	P0C0V8	87 aa	Known RBP	11.41	□□□□□ -0.58
CUE1	YMR264W	BET2	P20133	325 aa		11.41	□□□□□ -0.58
CUE1	YMR264W	SYP1	P25623	870 aa	Known RBP	11.41	□□□□□ -0.58
CUE1	YMR264W	CAT2	P32796	670 aa	Known RBP	11.41	□□□□□ -0.58
CUE1	YMR264W	YKL097C	P34245	136 aa		11.41	□□□□□ -0.58
CUE1	YMR264W	ECM4	P36156	370 aa		11.41	□□□□□ -0.58
CUE1	YMR264W	GGC1	P38988	300 aa		11.41	□□□□□ -0.58
CUE1	YMR264W	GDH3	P39708	457 aa		11.41	□□□□□ -0.58
CUE1	YMR264W	DLD3	P39976	496 aa	Known RBP	11.41	□□□□□ -0.58
CUE1	YMR264W	LAS21	P40367	830 aa		11.41	□□□□□ -0.58
CUE1	YMR264W	PMT4	P46971	762 aa		11.41	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms