RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C MDV1P47025 714 aa2.41□□□□□ -2.02
SGS1YMR190C STB4P50104 949 aa2.41□□□□□ -2.02
SGS1YMR190C ARE2P53629 642 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C IGO1P53897 168 aa2.41□□□□□ -2.02
SGS1YMR190C KTR6P54070 446 aa2.41□□□□□ -2.02
SGS1YMR190C CDC123Q05791 360 aa2.41□□□□□ -2.02
SGS1YMR190C RSC3Q06639 885 aa2.41□□□□□ -2.02
SGS1YMR190C YDR215CQ12240 137 aa2.41□□□□□ -2.02
SGS1YMR190C YOR214CQ12282 236 aa2.41□□□□□ -2.02
SGS1YMR190C OCA6Q12454 224 aa2.41□□□□□ -2.02
SGS1YMR190C YLR149CQ99296 730 aa2.41□□□□□ -2.02
SGS1YMR190C ATP2P00830 511 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C PBN1P25580 416 aa2.41□□□□□ -2.02
SGS1YMR190C NAM9P27929 486 aa2.41□□□□□ -2.02
SGS1YMR190C PRP18P33411 251 aaPredicted RBP2.41□□□□□ -2.02
SGS1YMR190C REV7P38927 245 aa2.41□□□□□ -2.02
SGS1YMR190C EDC3P39998 551 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C ATM1P40416 690 aa2.41□□□□□ -2.02
SGS1YMR190C ZIM17P42844 174 aa2.41□□□□□ -2.02
SGS1YMR190C BUD13P46947 266 aaPredicted RBP2.41□□□□□ -2.02
SGS1YMR190C YJR115WP47152 169 aa2.41□□□□□ -2.02
SGS1YMR190C ASN2P49090 572 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C MIG2P53035 382 aa2.41□□□□□ -2.02
SGS1YMR190C BIO4P53630 237 aa2.41□□□□□ -2.02
SGS1YMR190C DBP6P53734 629 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C YPL109CQ02981 657 aa2.41□□□□□ -2.02
SGS1YMR190C TVP15Q03860 143 aa2.41□□□□□ -2.02
SGS1YMR190C PSR1Q07800 427 aa2.41□□□□□ -2.02
SGS1YMR190C PUS7Q08647 676 aaKnown RBP2.41□□□□□ -2.02
SGS1YMR190C YIG1Q08956 461 aa2.41□□□□□ -2.02
SGS1YMR190C YMR030W-AQ3E760 96 aa2.41□□□□□ -2.02
SGS1YMR190C GPA2P10823 449 aa2.4□□□□□ -2.02
SGS1YMR190C HSP26P15992 214 aaKnown RBP RIP-Chip data2.4□□□□□ -2.02 RIP-Chip
SGS1YMR190C URA10P30402 227 aa2.4□□□□□ -2.02
SGS1YMR190C IRS4P36115 615 aaKnown RBP2.4□□□□□ -2.02
SGS1YMR190C YHR182WP38870 785 aa2.4□□□□□ -2.02
SGS1YMR190C CEM1P39525 442 aa2.4□□□□□ -2.02
SGS1YMR190C SOK1P40317 901 aa2.4□□□□□ -2.02
SGS1YMR190C COS12P53053 380 aa2.4□□□□□ -2.02
SGS1YMR190C NRD1P53617 575 aaKnown RBP RIP-Chip data2.4□□□□□ -2.02 RIP-Chip
SGS1YMR190C SPP2Q02521 185 aa2.4□□□□□ -2.02
SGS1YMR190C YLR053CQ12026 108 aa2.4□□□□□ -2.02
SGS1YMR190C ALY1P36117 915 aa2.4□□□□□ -2.03
SGS1YMR190C BIT2P38346 545 aa2.4□□□□□ -2.03
SGS1YMR190C YDR089WP38966 869 aa2.4□□□□□ -2.03
SGS1YMR190C MEF2P39677 819 aa2.4□□□□□ -2.03
SGS1YMR190C SSP120P39931 234 aaKnown RBP2.4□□□□□ -2.03
SGS1YMR190C PEP8P40335 379 aa2.4□□□□□ -2.03
SGS1YMR190C MPS3P47069 682 aa2.4□□□□□ -2.03
SGS1YMR190C YDL186WP48568 277 aa2.4□□□□□ -2.03
SGS1YMR190C RPS12P48589 143 aaKnown RBP2.4□□□□□ -2.03
SGS1YMR190C SNO2P53823 222 aa2.4□□□□□ -2.03
SGS1YMR190C GAS3Q03655 524 aa2.4□□□□□ -2.03
SGS1YMR190C YLR036CQ07986 203 aa2.4□□□□□ -2.03
SGS1YMR190C RAX1Q08760 435 aa2.4□□□□□ -2.03
SGS1YMR190C MCH5Q08777 521 aa2.4□□□□□ -2.03
SGS1YMR190C YOL107WQ12239 342 aa2.4□□□□□ -2.03
SGS1YMR190C STE6P12866 1290 aa2.4□□□□□ -2.03
SGS1YMR190C CLB3P24870 427 aa2.4□□□□□ -2.03
SGS1YMR190C AGP1P25376 633 aa2.4□□□□□ -2.03
SGS1YMR190C DCC1P25559 380 aa2.4□□□□□ -2.03
SGS1YMR190C GUT2P32191 649 aa2.4□□□□□ -2.03
SGS1YMR190C CDC12P32468 407 aaKnown RBP2.4□□□□□ -2.03
SGS1YMR190C SEF1P34228 1148 aa2.4□□□□□ -2.03
SGS1YMR190C BET3P36149 193 aa2.4□□□□□ -2.03
SGS1YMR190C OTU2P38747 307 aaKnown RBP2.4□□□□□ -2.03
SGS1YMR190C IRR1P40541 1150 aa2.4□□□□□ -2.03
SGS1YMR190C ARC1P46672 376 aaKnown RBP2.4□□□□□ -2.03
SGS1YMR190C ATG36P46983 293 aa2.4□□□□□ -2.03
SGS1YMR190C BIT61P47041 543 aa2.4□□□□□ -2.03
SGS1YMR190C MAD3P47074 515 aa2.4□□□□□ -2.03
SGS1YMR190C TOM22P49334 152 aa2.4□□□□□ -2.03
SGS1YMR190C LSM3P57743 89 aaKnown RBP2.4□□□□□ -2.03
SGS1YMR190C YDR249CQ03787 373 aa2.4□□□□□ -2.03
SGS1YMR190C YLR413WQ06689 675 aa2.4□□□□□ -2.03
SGS1YMR190C BUD20Q08004 166 aaPredicted RBP2.4□□□□□ -2.03
SGS1YMR190C NDD1Q08887 554 aa2.4□□□□□ -2.03
SGS1YMR190C COX5AP00424 153 aa2.39□□□□□ -2.03
SGS1YMR190C HXK2P04807 486 aaKnown RBP2.39□□□□□ -2.03
SGS1YMR190C PDX1P16451 410 aa2.39□□□□□ -2.03
SGS1YMR190C MDJ1P35191 511 aa2.39□□□□□ -2.03
SGS1YMR190C YBR139WP38109 508 aa2.39□□□□□ -2.03
SGS1YMR190C LIN1P38852 340 aaPredicted RBP2.39□□□□□ -2.03
SGS1YMR190C LYS1P38998 373 aaRIP-Chip data2.39□□□□□ -2.03not detected
SGS1YMR190C NDE1P40215 560 aa2.39□□□□□ -2.03
SGS1YMR190C CIS3P47001 227 aa2.39□□□□□ -2.03
SGS1YMR190C SBH2P52871 88 aa2.39□□□□□ -2.03
SGS1YMR190C YGR053CP53234 283 aa2.39□□□□□ -2.03
SGS1YMR190C YNL144CP53907 740 aa2.39□□□□□ -2.03
SGS1YMR190C BET4Q00618 327 aa2.39□□□□□ -2.03
SGS1YMR190C YDL121CQ07541 149 aa2.39□□□□□ -2.03
SGS1YMR190C YDL177CQ12257 170 aa2.39□□□□□ -2.03
SGS1YMR190C STE7P06784 515 aa2.39□□□□□ -2.03
SGS1YMR190C MET16P18408 261 aaPredicted RBP2.39□□□□□ -2.03
SGS1YMR190C PRP6P19735 899 aaPredicted RBP2.39□□□□□ -2.03
SGS1YMR190C KAR9P32526 644 aa2.39□□□□□ -2.03
SGS1YMR190C YBR096WP38256 230 aa2.39□□□□□ -2.03
SGS1YMR190C EXO84P38261 753 aa2.39□□□□□ -2.03
SGS1YMR190C URA8P38627 578 aaPredicted RBP2.39□□□□□ -2.03
SGS1YMR190C TAT2P38967 592 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms