RNA–Protein interactions for RNA: YMR180C

CTL1, Transcript of RNA 5'-triphosphatase, localizes to both the nucleus and cytoplasm, yeast

Gene CTL1, Length 963 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTL1	YMR180C	LEU4	P06208	619 aa	Known RBP	4.14	□□□□□ -1.75
CTL1	YMR180C	CHS1	P08004	1131 aa		4.14	□□□□□ -1.75
CTL1	YMR180C	RAD14	P28519	371 aa		4.14	□□□□□ -1.75
CTL1	YMR180C	ISC1	P40015	477 aa	Known RBP	4.14	□□□□□ -1.75
CTL1	YMR180C	TRS85	P46944	698 aa		4.14	□□□□□ -1.75
CTL1	YMR180C	YOL159C-A	Q3E769	90 aa		4.14	□□□□□ -1.75
CTL1	YMR180C	LPD1	P09624	499 aa	Known RBP	4.13	□□□□□ -1.75
CTL1	YMR180C	CPR1	P14832	162 aa	Known RBP	4.13	□□□□□ -1.75
CTL1	YMR180C	NDI1	P32340	513 aa		4.13	□□□□□ -1.75
CTL1	YMR180C	GLC7	P32598	312 aa	Known RBP	4.13	□□□□□ -1.75
CTL1	YMR180C	RSM22	P36056	628 aa		4.13	□□□□□ -1.75
CTL1	YMR180C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
CTL1	YMR180C	RSA1	Q08932	381 aa		4.13	□□□□□ -1.75
CTL1	YMR180C	PGA3	Q12746	312 aa	Known RBP	4.13	□□□□□ -1.75
CTL1	YMR180C	RTP1	Q12751	981 aa		4.13	□□□□□ -1.75
CTL1	YMR180C	HIP1	P06775	603 aa		4.12	□□□□□ -1.75
CTL1	YMR180C	RHO2	P06781	192 aa		4.12	□□□□□ -1.75
CTL1	YMR180C	PPH22	P23595	377 aa		4.12	□□□□□ -1.75
CTL1	YMR180C	YCR100C	P25606	316 aa		4.12	□□□□□ -1.75
CTL1	YMR180C	IDH2	P28241	369 aa	Known RBP	4.12	□□□□□ -1.75
CTL1	YMR180C	ERG3	P32353	365 aa		4.12	□□□□□ -1.75
CTL1	YMR180C	HXT3	P32466	567 aa	Known RBP	4.12	□□□□□ -1.75
CTL1	YMR180C	YBR139W	P38109	508 aa		4.12	□□□□□ -1.75
CTL1	YMR180C	MKT1	P40850	830 aa	Known RBP	4.12	□□□□□ -1.75
CTL1	YMR180C	SOV1	Q04748	898 aa		4.12	□□□□□ -1.75
CTL1	YMR180C	RTN2	Q12443	393 aa		4.12	□□□□□ -1.75
CTL1	YMR180C	CDC31	P06704	161 aa	Known RBP	4.11	□□□□□ -1.75
CTL1	YMR180C	YIM1	P28625	365 aa		4.11	□□□□□ -1.75
CTL1	YMR180C	MRP4	P32902	394 aa		4.11	□□□□□ -1.75
CTL1	YMR180C	CBP4	P37267	147 aa		4.11	□□□□□ -1.75
CTL1	YMR180C	TFG2	P41896	400 aa	Predicted RBP	4.11	□□□□□ -1.75
CTL1	YMR180C	SPG5	P42933	373 aa		4.11	□□□□□ -1.75
CTL1	YMR180C	YPI1	P43587	155 aa		4.11	□□□□□ -1.75
CTL1	YMR180C	MDM1	Q01846	1127 aa		4.11	□□□□□ -1.75
CTL1	YMR180C	INH1	P01097	85 aa		4.1	□□□□□ -1.75
CTL1	YMR180C	RPL3	P14126	387 aa	Known RBP	4.1	□□□□□ -1.75
CTL1	YMR180C	RED1	P14291	827 aa		4.1	□□□□□ -1.75
CTL1	YMR180C	YBP1	P38315	674 aa		4.1	□□□□□ -1.75
CTL1	YMR180C	POP6	P53218	158 aa		4.1	□□□□□ -1.75
CTL1	YMR180C	OGG1	P53397	376 aa	Predicted RBP	4.1	□□□□□ -1.75
CTL1	YMR180C	RPA49	Q01080	415 aa	Predicted RBP	4.1	□□□□□ -1.75
CTL1	YMR180C	NIP100	P33420	868 aa		4.09	□□□□□ -1.75
CTL1	YMR180C	SAS3	P34218	831 aa		4.09	□□□□□ -1.75
CTL1	YMR180C	RFS1	P38234	210 aa	Known RBP	4.09	□□□□□ -1.75
CTL1	YMR180C	CCT2	P39076	527 aa	Known RBP	4.09	□□□□□ -1.75
CTL1	YMR180C	RMD9	P53140	646 aa	Known RBP	4.09	□□□□□ -1.75
CTL1	YMR180C	PCP1	P53259	346 aa		4.09	□□□□□ -1.75
CTL1	YMR180C	CAF40	P53829	373 aa		4.09	□□□□□ -1.75
CTL1	YMR180C	ODC1	Q03028	310 aa		4.09	□□□□□ -1.75
CTL1	YMR180C	SIL1	Q08199	421 aa		4.09	□□□□□ -1.75
CTL1	YMR180C	THP3	Q12049	470 aa	Known RBP	4.09	□□□□□ -1.75
CTL1	YMR180C	SPS4	P09937	338 aa		4.08	□□□□□ -1.76
CTL1	YMR180C	PRP21	P32524	280 aa	Predicted RBP	4.08	□□□□□ -1.76
CTL1	YMR180C	YCR041W	P37265	110 aa		4.08	□□□□□ -1.76
CTL1	YMR180C	YIL067C	P40514	678 aa		4.08	□□□□□ -1.76
CTL1	YMR180C	NCS2	P53923	493 aa	Predicted RBP	4.08	□□□□□ -1.76
CTL1	YMR180C	PNG1	Q02890	363 aa		4.08	□□□□□ -1.76
CTL1	YMR180C	VPS72	Q03388	795 aa		4.08	□□□□□ -1.76
CTL1	YMR180C	YLR278C	Q05854	1341 aa		4.07	□□□□□ -1.76
CTL1	YMR180C	YAR066W	P0CX18	203 aa		4.07	□□□□□ -1.76
CTL1	YMR180C	YHR214W	P0CX19	203 aa		4.07	□□□□□ -1.76
CTL1	YMR180C	SAM1	P10659	382 aa	Known RBP	4.07	□□□□□ -1.76
CTL1	YMR180C	HEM15	P16622	393 aa		4.07	□□□□□ -1.76
CTL1	YMR180C	SAM2	P19358	384 aa	Known RBP	4.07	□□□□□ -1.76
CTL1	YMR180C	GYP6	P32806	458 aa		4.07	□□□□□ -1.76
CTL1	YMR180C	OTU2	P38747	307 aa	Known RBP	4.07	□□□□□ -1.76
CTL1	YMR180C	VTC2	P43585	828 aa		4.07	□□□□□ -1.76
CTL1	YMR180C	GOR1	P53839	350 aa		4.07	□□□□□ -1.76
CTL1	YMR180C	SYF1	Q04048	859 aa	Predicted RBP	4.07	□□□□□ -1.76
CTL1	YMR180C	YDR387C	Q04162	555 aa		4.07	□□□□□ -1.76
CTL1	YMR180C	YOR387C	Q08910	206 aa		4.07	□□□□□ -1.76
CTL1	YMR180C	CRM1	P30822	1084 aa	Known RBP	4.06	□□□□□ -1.76
CTL1	YMR180C	NAT2	P37293	288 aa		4.06	□□□□□ -1.76
CTL1	YMR180C	SDS24	P38314	527 aa		4.06	□□□□□ -1.76
CTL1	YMR180C	DLD2	P46681	530 aa	Known RBP	4.06	□□□□□ -1.76
CTL1	YMR180C	YLR287C	Q05881	355 aa		4.06	□□□□□ -1.76
CTL1	YMR180C	VTA1	Q06263	330 aa		4.06	□□□□□ -1.76
CTL1	YMR180C	YPL199C	Q08954	240 aa		4.06	□□□□□ -1.76
CTL1	YMR180C	RIP1	P08067	215 aa		4.05	□□□□□ -1.76
CTL1	YMR180C	SEC63	P14906	663 aa		4.05	□□□□□ -1.76
CTL1	YMR180C	ECM25	P32525	599 aa		4.05	□□□□□ -1.76
CTL1	YMR180C	RML2	P32611	393 aa		4.05	□□□□□ -1.76
CTL1	YMR180C	SAS2	P40963	338 aa		4.05	□□□□□ -1.76
CTL1	YMR180C	YIP1	P53039	248 aa		4.05	□□□□□ -1.76
CTL1	YMR180C	GIR2	Q03768	265 aa	Predicted RBP	4.05	□□□□□ -1.76
CTL1	YMR180C	HSP31	Q04432	237 aa		4.05	□□□□□ -1.76
CTL1	YMR180C	ERV2	Q12284	196 aa		4.05	□□□□□ -1.76
CTL1	YMR180C	GPH1	P06738	902 aa	Known RBP	4.04	□□□□□ -1.76
CTL1	YMR180C	NAM9	P27929	486 aa		4.04	□□□□□ -1.76
CTL1	YMR180C	ITR1	P30605	584 aa		4.04	□□□□□ -1.76
CTL1	YMR180C	NPL6	P32832	435 aa		4.04	□□□□□ -1.76
CTL1	YMR180C	REC114	P32841	428 aa		4.04	□□□□□ -1.76
CTL1	YMR180C	VHC1	P38329	1120 aa		4.04	□□□□□ -1.76
CTL1	YMR180C	OST1	P41543	476 aa	Known RBP	4.04	□□□□□ -1.76
CTL1	YMR180C	YFL067W	P43537	175 aa		4.04	□□□□□ -1.76
CTL1	YMR180C	MNP1	P53163	194 aa	Predicted RBP	4.04	□□□□□ -1.76
CTL1	YMR180C	YGR250C	P53316	781 aa	Known RBP	4.04	□□□□□ -1.76
CTL1	YMR180C	YIF1	P53845	314 aa	Known RBP	4.04	□□□□□ -1.76
CTL1	YMR180C	DSL1	P53847	754 aa		4.04	□□□□□ -1.76
CTL1	YMR180C	YMR155W	Q03795	547 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms