RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W YBR225WP38321 900 aa3.07□□□□□ -1.92
CSI1YMR025W ERP2P39704 215 aa3.07□□□□□ -1.92
CSI1YMR025W URB2P47108 1174 aa3.07□□□□□ -1.92
CSI1YMR025W VID30P53076 958 aa3.07□□□□□ -1.92
CSI1YMR025W MFB1Q04922 465 aa3.07□□□□□ -1.92
CSI1YMR025W MRPL10P36520 322 aa3.06□□□□□ -1.92
CSI1YMR025W RIB5P38145 238 aa3.06□□□□□ -1.92
CSI1YMR025W RAV1P47104 1357 aa3.06□□□□□ -1.92
CSI1YMR025W PNG1Q02890 363 aa3.06□□□□□ -1.92
CSI1YMR025W MRP51Q02950 344 aa3.06□□□□□ -1.92
CSI1YMR025W YPT6Q99260 215 aa3.06□□□□□ -1.92
CSI1YMR025W LEU4P06208 619 aaKnown RBP3.05□□□□□ -1.92
CSI1YMR025W LYS14P40971 790 aa3.05□□□□□ -1.92
CSI1YMR025W BRO1P48582 844 aa3.05□□□□□ -1.92
CSI1YMR025W MTM1P53320 366 aa3.05□□□□□ -1.92
CSI1YMR025W HXT11P54862 567 aa3.05□□□□□ -1.92
CSI1YMR025W NGL3Q03210 505 aa3.05□□□□□ -1.92
CSI1YMR025W YEH1Q07804 573 aa3.05□□□□□ -1.92
CSI1YMR025W RLM1Q12224 676 aa3.05□□□□□ -1.92
CSI1YMR025W YBR126W-AQ8TGU7 68 aa3.05□□□□□ -1.92
CSI1YMR025W RAD61Q99359 647 aa3.05□□□□□ -1.92
CSI1YMR025W NFT1P0CE68 1218 aa3.04□□□□□ -1.92
CSI1YMR025W TCD2P36101 447 aaKnown RBP3.04□□□□□ -1.92
CSI1YMR025W MST28P39552 234 aa3.04□□□□□ -1.92
CSI1YMR025W CWC25P53854 179 aaKnown RBP3.04□□□□□ -1.92
CSI1YMR025W IOC4Q04213 475 aa3.04□□□□□ -1.92
CSI1YMR025W YKU80Q04437 629 aa3.04□□□□□ -1.92
CSI1YMR025W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
CSI1YMR025W SSP2Q08646 371 aa3.04□□□□□ -1.92
CSI1YMR025W KKQ8P36004 724 aa3.03□□□□□ -1.92
CSI1YMR025W MUM2P38236 366 aa3.03□□□□□ -1.92
CSI1YMR025W YHR131CP38835 850 aa3.03□□□□□ -1.92
CSI1YMR025W MDG1P53885 366 aa3.03□□□□□ -1.92
CSI1YMR025W SLG1P54867 378 aa3.03□□□□□ -1.92
CSI1YMR025W ATG16Q03818 150 aa3.03□□□□□ -1.92
CSI1YMR025W MUM3Q08750 479 aa3.03□□□□□ -1.92
CSI1YMR025W NOP58Q12499 511 aaKnown RBP3.03□□□□□ -1.92
CSI1YMR025W YBL111CQ3E7Y5 667 aa3.03□□□□□ -1.92
CSI1YMR025W TRP1P00912 224 aa3.02□□□□□ -1.93
CSI1YMR025W YMR147WP40218 223 aaKnown RBP3.02□□□□□ -1.93
CSI1YMR025W YML131WQ03102 365 aa3.02□□□□□ -1.93
CSI1YMR025W VPS38Q05919 439 aa3.02□□□□□ -1.93
CSI1YMR025W TY1B-DR4Q07793 1604 aa3.01□□□□□ -1.93
CSI1YMR025W NUP2P32499 720 aa3.01□□□□□ -1.93
CSI1YMR025W YCR041WP37265 110 aa3.01□□□□□ -1.93
CSI1YMR025W VID24P38263 362 aa3.01□□□□□ -1.93
CSI1YMR025W SGN1P40561 250 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
CSI1YMR025W LAM5P43560 674 aa3.01□□□□□ -1.93
CSI1YMR025W SSN8P47821 323 aa3.01□□□□□ -1.93
CSI1YMR025W DUO1P53168 247 aaKnown RBP3.01□□□□□ -1.93
CSI1YMR025W CUE5Q08412 411 aaKnown RBP3.01□□□□□ -1.93
CSI1YMR025W GAB1P41733 394 aa3□□□□□ -1.93
CSI1YMR025W YJR085CP47131 105 aaKnown RBP3□□□□□ -1.93
CSI1YMR025W OCA1P50946 238 aaPredicted RBP3□□□□□ -1.93
CSI1YMR025W FIN1Q03898 291 aa3□□□□□ -1.93
CSI1YMR025W PPM1Q04081 328 aa3□□□□□ -1.93
CSI1YMR025W SOV1Q04748 898 aa3□□□□□ -1.93
CSI1YMR025W PRD1P25375 712 aa2.99□□□□□ -1.93
CSI1YMR025W CBP4P37267 147 aa2.99□□□□□ -1.93
CSI1YMR025W YBR137WP38276 179 aa2.99□□□□□ -1.93
CSI1YMR025W SSU1P41930 458 aa2.99□□□□□ -1.93
CSI1YMR025W YJR008WP47085 338 aa2.99□□□□□ -1.93
CSI1YMR025W CAF130P53280 1122 aaPredicted RBP2.99□□□□□ -1.93
CSI1YMR025W IRC25Q07951 179 aa2.99□□□□□ -1.93
CSI1YMR025W HUA2Q12134 243 aa2.99□□□□□ -1.93
CSI1YMR025W TIP1P27654 210 aaPredicted RBP2.98□□□□□ -1.93
CSI1YMR025W UTP18P40362 594 aaPredicted RBP2.98□□□□□ -1.93
CSI1YMR025W NMD4Q12129 218 aa2.98□□□□□ -1.93
CSI1YMR025W ECM5Q03214 1411 aa2.97□□□□□ -1.93
CSI1YMR025W CDC16P09798 840 aa2.97□□□□□ -1.93
CSI1YMR025W FLC2P39719 783 aa2.97□□□□□ -1.93
CSI1YMR025W YIP1P53039 248 aa2.97□□□□□ -1.93
CSI1YMR025W PKH2Q12236 1081 aaKnown RBP2.97□□□□□ -1.93
CSI1YMR025W RRD2Q12461 358 aa2.97□□□□□ -1.93
CSI1YMR025W GAL80P04387 435 aa2.96□□□□□ -1.94
CSI1YMR025W POP5P28005 173 aa2.96□□□□□ -1.94
CSI1YMR025W ITR1P30605 584 aa2.96□□□□□ -1.94
CSI1YMR025W WBP1P33767 430 aaKnown RBP2.96□□□□□ -1.94
CSI1YMR025W TPM2P40414 161 aa2.96□□□□□ -1.94
CSI1YMR025W TIM18Q08749 192 aa2.96□□□□□ -1.94
CSI1YMR025W AVL9Q12500 764 aa2.96□□□□□ -1.94
CSI1YMR025W CCH1P50077 2039 aa2.96□□□□□ -1.94
CSI1YMR025W YKL097CP34245 136 aa2.95□□□□□ -1.94
CSI1YMR025W PCP1P53259 346 aa2.95□□□□□ -1.94
CSI1YMR025W IGO1P53897 168 aa2.95□□□□□ -1.94
CSI1YMR025W YMR181CQ03231 154 aa2.95□□□□□ -1.94
CSI1YMR025W MRD1Q06106 887 aaKnown RBP2.95□□□□□ -1.94
CSI1YMR025W YPR022CQ12139 1133 aa2.95□□□□□ -1.94
CSI1YMR025W YJR112W-AQ3E743 109 aa2.95□□□□□ -1.94
CSI1YMR025W SPT6P23615 1451 aaKnown RBP2.95□□□□□ -1.94
CSI1YMR025W CYC3P06182 269 aa2.94□□□□□ -1.94
CSI1YMR025W RPL31BP0C2H9 113 aaKnown RBP2.94□□□□□ -1.94
CSI1YMR025W SLY1P22213 666 aa2.94□□□□□ -1.94
CSI1YMR025W PEP3P27801 918 aa2.94□□□□□ -1.94
CSI1YMR025W NPL6P32832 435 aa2.94□□□□□ -1.94
CSI1YMR025W SNX3Q08826 162 aaKnown RBP2.94□□□□□ -1.94
CSI1YMR025W SPA2P23201 1466 aaKnown RBP2.94□□□□□ -1.94
CSI1YMR025W KAR9P32526 644 aa2.93□□□□□ -1.94
CSI1YMR025W REG2P38232 338 aa2.93□□□□□ -1.94
CSI1YMR025W AIM10P39965 576 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 69.1 ms