RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C REG1Q00816 1014 aa10.74□□□□□ -0.69
SPT8YLR055C EFR3Q03653 782 aaKnown RBP10.74□□□□□ -0.69
SPT8YLR055C UPC2Q12151 913 aa10.74□□□□□ -0.69
SPT8YLR055C ICT1Q12385 394 aa10.74□□□□□ -0.69
SPT8YLR055C HXK2P04807 486 aaKnown RBP10.74□□□□□ -0.69
SPT8YLR055C CRM1P30822 1084 aaKnown RBP10.74□□□□□ -0.69
SPT8YLR055C RPS0AP32905 252 aaKnown RBP10.74□□□□□ -0.69
SPT8YLR055C RPS1AP33442 255 aaKnown RBP10.74□□□□□ -0.69
SPT8YLR055C SRP72P38688 640 aaKnown RBP10.74□□□□□ -0.69
SPT8YLR055C ARN2P38724 620 aa10.74□□□□□ -0.69
SPT8YLR055C YHL041WP38730 149 aa10.74□□□□□ -0.69
SPT8YLR055C PET100P38958 111 aa10.74□□□□□ -0.69
SPT8YLR055C DUN1P39009 513 aa10.74□□□□□ -0.69
SPT8YLR055C DHH1P39517 506 aaKnown RBP10.74□□□□□ -0.69
SPT8YLR055C AYR1P40471 297 aa10.74□□□□□ -0.69
SPT8YLR055C ARF3P40994 183 aaRIP-Chip data10.74□□□□□ -0.69 RIP-Chip
SPT8YLR055C YPT32P51996 222 aaKnown RBP10.74□□□□□ -0.69
SPT8YLR055C VEL1P53058 206 aa10.74□□□□□ -0.69
SPT8YLR055C STR3P53101 465 aaKnown RBP10.74□□□□□ -0.69
SPT8YLR055C YDR124WQ04608 324 aa10.74□□□□□ -0.69
SPT8YLR055C VTA1Q06263 330 aa10.74□□□□□ -0.69
SPT8YLR055C MDM12Q92328 271 aa10.74□□□□□ -0.69
SPT8YLR055C DAL81P21657 970 aa10.73□□□□□ -0.69
SPT8YLR055C MIH1P23748 554 aa10.73□□□□□ -0.69
SPT8YLR055C RHB1P25378 209 aa10.73□□□□□ -0.69
SPT8YLR055C RIB1P38066 345 aa10.73□□□□□ -0.69
SPT8YLR055C ERV46P39727 415 aa10.73□□□□□ -0.69
SPT8YLR055C TPA1P40032 644 aaKnown RBP10.73□□□□□ -0.69
SPT8YLR055C SER33P40510 469 aa10.73□□□□□ -0.69
SPT8YLR055C ATH1P48016 1211 aa10.73□□□□□ -0.69
SPT8YLR055C DAM1P53267 343 aa10.73□□□□□ -0.69
SPT8YLR055C BIO5P53744 561 aaKnown RBP10.73□□□□□ -0.69
SPT8YLR055C GRX5Q02784 150 aa10.73□□□□□ -0.69
SPT8YLR055C SWA2Q06677 668 aa10.73□□□□□ -0.69
SPT8YLR055C SAM4Q08985 325 aaKnown RBP10.73□□□□□ -0.69
SPT8YLR055C YLR046CQ12253 270 aa10.73□□□□□ -0.69
SPT8YLR055C GLE1Q12315 538 aa10.73□□□□□ -0.69
SPT8YLR055C HSP42Q12329 375 aa10.73□□□□□ -0.69
SPT8YLR055C WTM1Q12363 437 aaKnown RBP10.73□□□□□ -0.69
SPT8YLR055C MPD2Q99316 277 aa10.73□□□□□ -0.69
SPT8YLR055C RAS2P01120 322 aaKnown RBP10.72□□□□□ -0.69
SPT8YLR055C RPL24BP24000 155 aaKnown RBP10.72□□□□□ -0.69
SPT8YLR055C HCS1P34243 683 aa10.72□□□□□ -0.69
SPT8YLR055C SCD5P34758 872 aa10.72□□□□□ -0.69
SPT8YLR055C APM3P38153 483 aa10.72□□□□□ -0.69
SPT8YLR055C YHR045WP38775 560 aa10.72□□□□□ -0.69
SPT8YLR055C MTG2P38860 518 aa10.72□□□□□ -0.69
SPT8YLR055C DIE2P50076 525 aa10.72□□□□□ -0.69
SPT8YLR055C SAP4P53036 818 aa10.72□□□□□ -0.69
SPT8YLR055C LSG1P53145 640 aaKnown RBP10.72□□□□□ -0.69
SPT8YLR055C NEJ1Q06148 342 aa10.72□□□□□ -0.69
SPT8YLR055C YGK3Q12222 375 aaPredicted RBP10.72□□□□□ -0.69
SPT8YLR055C PEX11Q12462 236 aa10.72□□□□□ -0.69
SPT8YLR055C GPM1P00950 247 aaKnown RBP10.72□□□□□ -0.69
SPT8YLR055C SST2P11972 698 aaKnown RBP10.72□□□□□ -0.69
SPT8YLR055C MRPL8P22353 238 aa10.72□□□□□ -0.69
SPT8YLR055C GIT1P25346 518 aa10.72□□□□□ -0.69
SPT8YLR055C OCA4P25366 362 aa10.72□□□□□ -0.69
SPT8YLR055C PTC6P25646 442 aa10.72□□□□□ -0.69
SPT8YLR055C MF(ALPHA)2P32435 120 aa10.72□□□□□ -0.69
SPT8YLR055C IMP3P32899 183 aaPredicted RBP10.72□□□□□ -0.69
SPT8YLR055C ACO2P39533 789 aa10.72□□□□□ -0.69
SPT8YLR055C RGI2P40188 164 aa10.72□□□□□ -0.69
SPT8YLR055C RMD8P43620 662 aa10.72□□□□□ -0.69
SPT8YLR055C MET12P46151 657 aa10.72□□□□□ -0.69
SPT8YLR055C PYK2P52489 506 aaKnown RBP10.72□□□□□ -0.69
SPT8YLR055C SHY1P53266 389 aa10.72□□□□□ -0.69
SPT8YLR055C SNF12P53628 566 aa10.72□□□□□ -0.69
SPT8YLR055C GSH2Q08220 491 aa10.72□□□□□ -0.69
SPT8YLR055C GRR1P24814 1151 aa10.71□□□□□ -0.69
SPT8YLR055C GEX1P25596 615 aa10.71□□□□□ -0.69
SPT8YLR055C GUT2P32191 649 aa10.71□□□□□ -0.69
SPT8YLR055C GEX2P36173 615 aa10.71□□□□□ -0.69
SPT8YLR055C GPX2P38143 162 aa10.71□□□□□ -0.69
SPT8YLR055C IST3P40565 148 aaPredicted RBP10.71□□□□□ -0.69
SPT8YLR055C YNR061CP53747 219 aa10.71□□□□□ -0.69
SPT8YLR055C CAF120P53836 1060 aa10.71□□□□□ -0.69
SPT8YLR055C YML108WQ03759 105 aa10.71□□□□□ -0.69
SPT8YLR055C ECM11Q04110 302 aa10.71□□□□□ -0.69
SPT8YLR055C YPR196WQ06595 470 aa10.71□□□□□ -0.69
SPT8YLR055C THP1Q08231 455 aa10.71□□□□□ -0.69
SPT8YLR055C MLH3Q12083 715 aa10.71□□□□□ -0.69
SPT8YLR055C PST2Q12335 198 aaKnown RBP10.71□□□□□ -0.69
SPT8YLR055C CET1O13297 549 aaPredicted RBP10.7□□□□□ -0.7
SPT8YLR055C DST1P07273 309 aa10.7□□□□□ -0.7
SPT8YLR055C SPS1P08458 490 aa10.7□□□□□ -0.7
SPT8YLR055C STF2P16965 84 aa10.7□□□□□ -0.7
SPT8YLR055C YCR016WP25617 290 aaKnown RBP10.7□□□□□ -0.7
SPT8YLR055C VPS21P36017 210 aaKnown RBP10.7□□□□□ -0.7
SPT8YLR055C STB6P36085 766 aa10.7□□□□□ -0.7
SPT8YLR055C AHP1P38013 176 aaKnown RBP10.7□□□□□ -0.7
SPT8YLR055C RSP5P39940 809 aaKnown RBP10.7□□□□□ -0.7
SPT8YLR055C SPF1P39986 1215 aaKnown RBP10.7□□□□□ -0.7
SPT8YLR055C COG3P40094 801 aa10.7□□□□□ -0.7
SPT8YLR055C ARO8P53090 500 aaKnown RBP10.7□□□□□ -0.7
SPT8YLR055C PIR1Q03178 341 aa10.7□□□□□ -0.7
SPT8YLR055C EMI1Q04406 187 aa10.7□□□□□ -0.7
SPT8YLR055C MFG1Q07684 458 aa10.7□□□□□ -0.7
SPT8YLR055C BUD7Q08754 746 aa10.7□□□□□ -0.7
SPT8YLR055C YLR149CQ99296 730 aa10.7□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 67.8 ms