RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C AIM17P23180 465 aaKnown RBP2.22□□□□□ -2.05
UBP11YKR098C RHB1P25378 209 aa2.22□□□□□ -2.05
UBP11YKR098C SCO2P38072 301 aa2.22□□□□□ -2.05
UBP11YKR098C ZTA1P38230 334 aaKnown RBP2.22□□□□□ -2.05
UBP11YKR098C FAD1P38913 306 aa2.22□□□□□ -2.05
UBP11YKR098C YER130CP39959 443 aa2.22□□□□□ -2.05
UBP11YKR098C IAH1P41734 238 aa2.22□□□□□ -2.05
UBP11YKR098C POP1P41812 875 aa2.22□□□□□ -2.05
UBP11YKR098C MLC1P53141 149 aa2.22□□□□□ -2.05
UBP11YKR098C YNL181WP53878 407 aa2.22□□□□□ -2.05
UBP11YKR098C RHO5P53879 331 aaKnown RBP2.22□□□□□ -2.05
UBP11YKR098C ESBP6P53918 673 aa2.22□□□□□ -2.05
UBP11YKR098C OCA2P53949 197 aa2.22□□□□□ -2.05
UBP11YKR098C SLD5Q03406 294 aa2.22□□□□□ -2.05
UBP11YKR098C RIM13Q03792 727 aa2.22□□□□□ -2.05
UBP11YKR098C THI7Q05998 598 aa2.22□□□□□ -2.05
UBP11YKR098C BSC1Q12140 328 aa2.22□□□□□ -2.05
UBP11YKR098C RKM5Q12367 367 aa2.22□□□□□ -2.05
UBP11YKR098C ARP6Q12509 438 aa2.22□□□□□ -2.05
UBP11YKR098C MTR10Q99189 972 aa2.22□□□□□ -2.05
UBP11YKR098C YLR278CQ05854 1341 aa2.21□□□□□ -2.06
UBP11YKR098C SCEIP03882 235 aa2.21□□□□□ -2.06
UBP11YKR098C YCP4P25349 247 aaKnown RBP2.21□□□□□ -2.06
UBP11YKR098C CUE2P36075 443 aaKnown RBP2.21□□□□□ -2.06
UBP11YKR098C DAD2P36162 133 aa2.21□□□□□ -2.06
UBP11YKR098C YMR124WP39523 943 aaKnown RBP2.21□□□□□ -2.06
UBP11YKR098C PCL6P40038 420 aa2.21□□□□□ -2.06
UBP11YKR098C FAU1P40099 211 aa2.21□□□□□ -2.06
UBP11YKR098C PSA1P41940 361 aaKnown RBP2.21□□□□□ -2.06
UBP11YKR098C TOF1P53840 1238 aa2.21□□□□□ -2.06
UBP11YKR098C HSP31Q04432 237 aa2.21□□□□□ -2.06
UBP11YKR098C IVY1Q04934 453 aa2.21□□□□□ -2.06
UBP11YKR098C GLO2Q05584 274 aa2.21□□□□□ -2.06
UBP11YKR098C BNA5Q05979 453 aa2.21□□□□□ -2.06
UBP11YKR098C YLR456WQ06199 204 aa2.21□□□□□ -2.06
UBP11YKR098C THI20Q08224 551 aa2.21□□□□□ -2.06
UBP11YKR098C COX3P00420 269 aa2.2□□□□□ -2.06
UBP11YKR098C YML002WP0CF17 737 aa2.2□□□□□ -2.06
UBP11YKR098C MDM10P18409 493 aa2.2□□□□□ -2.06
UBP11YKR098C DAP2P18962 818 aa2.2□□□□□ -2.06
UBP11YKR098C YCR007CP25354 239 aa2.2□□□□□ -2.06
UBP11YKR098C SIF2P38262 535 aa2.2□□□□□ -2.06
UBP11YKR098C YSW1P38280 609 aa2.2□□□□□ -2.06
UBP11YKR098C OSH3P38713 996 aaKnown RBP2.2□□□□□ -2.06
UBP11YKR098C CSM2P40465 213 aa2.2□□□□□ -2.06
UBP11YKR098C XBP1P40489 647 aa2.2□□□□□ -2.06
UBP11YKR098C SAS2P40963 338 aa2.2□□□□□ -2.06
UBP11YKR098C SCD6P45978 349 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
UBP11YKR098C GPI1P53306 609 aa2.2□□□□□ -2.06
UBP11YKR098C NCS2P53923 493 aaPredicted RBP2.2□□□□□ -2.06
UBP11YKR098C SAM50P53969 484 aa2.2□□□□□ -2.06
UBP11YKR098C YMR087WQ04299 284 aa2.2□□□□□ -2.06
UBP11YKR098C CAR1P00812 333 aaKnown RBP2.2□□□□□ -2.06
UBP11YKR098C LEU4P06208 619 aaKnown RBP2.2□□□□□ -2.06
UBP11YKR098C AMD1P15274 810 aaKnown RBP2.2□□□□□ -2.06
UBP11YKR098C BUB3P26449 341 aa2.2□□□□□ -2.06
UBP11YKR098C MSP1P28737 362 aa2.2□□□□□ -2.06
UBP11YKR098C SPC110P32380 944 aa2.2□□□□□ -2.06
UBP11YKR098C REC114P32841 428 aa2.2□□□□□ -2.06
UBP11YKR098C RPS0AP32905 252 aaKnown RBP2.2□□□□□ -2.06
UBP11YKR098C SOR1P35497 357 aaKnown RBP2.2□□□□□ -2.06
UBP11YKR098C CBP4P37267 147 aa2.2□□□□□ -2.06
UBP11YKR098C ADH5P38113 351 aaKnown RBP2.2□□□□□ -2.06
UBP11YKR098C GND1P38720 489 aaKnown RBP2.2□□□□□ -2.06
UBP11YKR098C MLH1P38920 769 aa2.2□□□□□ -2.06
UBP11YKR098C GUF1P46943 645 aa2.2□□□□□ -2.06
UBP11YKR098C YJR011CP47086 261 aaPredicted RBP2.2□□□□□ -2.06
UBP11YKR098C BET4Q00618 327 aa2.2□□□□□ -2.06
UBP11YKR098C MSS11Q03825 758 aa2.2□□□□□ -2.06
UBP11YKR098C PPM1Q04081 328 aa2.2□□□□□ -2.06
UBP11YKR098C SOR2Q07786 357 aa2.2□□□□□ -2.06
UBP11YKR098C ADE4P04046 510 aaKnown RBP2.19□□□□□ -2.06
UBP11YKR098C RPL6BP05739 176 aaKnown RBP2.19□□□□□ -2.06
UBP11YKR098C VMA2P16140 517 aaKnown RBP2.19□□□□□ -2.06
UBP11YKR098C MGR1P25573 417 aa2.19□□□□□ -2.06
UBP11YKR098C ACH1P32316 526 aa2.19□□□□□ -2.06
UBP11YKR098C NIP1P32497 812 aaKnown RBP2.19□□□□□ -2.06
UBP11YKR098C RAD24P32641 659 aa2.19□□□□□ -2.06
UBP11YKR098C VPS17P32913 551 aa2.19□□□□□ -2.06
UBP11YKR098C ECM15P35195 104 aa2.19□□□□□ -2.06
UBP11YKR098C UIP5P36137 443 aa2.19□□□□□ -2.06
UBP11YKR098C PFF1P38244 976 aa2.19□□□□□ -2.06
UBP11YKR098C EFM2P38347 419 aa2.19□□□□□ -2.06
UBP11YKR098C PCA1P38360 1216 aa2.19□□□□□ -2.06
UBP11YKR098C NAS2P40555 220 aa2.19□□□□□ -2.06
UBP11YKR098C BNA3P47039 444 aaKnown RBP2.19□□□□□ -2.06
UBP11YKR098C RPL6AQ02326 176 aaKnown RBP2.19□□□□□ -2.06
UBP11YKR098C YDR387CQ04162 555 aa2.19□□□□□ -2.06
UBP11YKR098C YDR341CQ05506 607 aaKnown RBP2.19□□□□□ -2.06
UBP11YKR098C YFL068WP0CX99 160 aa2.19□□□□□ -2.06
UBP11YKR098C YLL066W-AP0CY00 160 aa2.19□□□□□ -2.06
UBP11YKR098C YLL067W-AP0CY01 160 aa2.19□□□□□ -2.06
UBP11YKR098C PMR1P13586 950 aa2.19□□□□□ -2.06
UBP11YKR098C RIM1P32445 135 aaKnown RBP2.19□□□□□ -2.06
UBP11YKR098C FRE1P32791 686 aa2.19□□□□□ -2.06
UBP11YKR098C RRN10P38204 145 aa2.19□□□□□ -2.06
UBP11YKR098C POP2P39008 433 aa2.19□□□□□ -2.06
UBP11YKR098C ATF1P40353 525 aa2.19□□□□□ -2.06
UBP11YKR098C TRS85P46944 698 aa2.19□□□□□ -2.06
UBP11YKR098C FYV8P46949 817 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 54.9 ms