RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C YKR078WP36158 585 aaKnown RBP11.11□□□□□ -0.63
YKR040CYKR040C NEO1P40527 1151 aa11.11□□□□□ -0.63
YKR040CYKR040C HOC1P47124 396 aa11.11□□□□□ -0.63
YKR040CYKR040C YGR266WP53326 701 aa11.11□□□□□ -0.63
YKR040CYKR040C CUS2P53830 285 aaPredicted RBP11.11□□□□□ -0.63
YKR040CYKR040C REX4Q08237 289 aa11.11□□□□□ -0.63
YKR040CYKR040C PUS9Q12069 462 aa11.11□□□□□ -0.63
YKR040CYKR040C PRT1P06103 763 aaKnown RBP11.1□□□□□ -0.63
YKR040CYKR040C SIN4P32259 974 aa11.1□□□□□ -0.63
YKR040CYKR040C OAR1P35731 278 aa11.1□□□□□ -0.63
YKR040CYKR040C GTO1P48239 356 aa11.1□□□□□ -0.63
YKR040CYKR040C NAS6P50086 228 aa11.1□□□□□ -0.63
YKR040CYKR040C ROG1P53118 685 aa11.1□□□□□ -0.63
YKR040CYKR040C IRC15Q02733 499 aa11.1□□□□□ -0.63
YKR040CYKR040C YDR124WQ04608 324 aa11.1□□□□□ -0.63
YKR040CYKR040C VID22Q05934 901 aa11.1□□□□□ -0.63
YKR040CYKR040C TEN1Q07921 160 aa11.1□□□□□ -0.63
YKR040CYKR040C YOL159CQ08300 171 aa11.1□□□□□ -0.63
YKR040CYKR040C YPT6Q99260 215 aa11.1□□□□□ -0.63
YKR040CYKR040C CAR1P00812 333 aaKnown RBP11.09□□□□□ -0.63
YKR040CYKR040C TY2A-LR1P0C2J4 438 aa11.09□□□□□ -0.63
YKR040CYKR040C TY2A-FP0CX61 438 aa11.09□□□□□ -0.63
YKR040CYKR040C TY2A-GR2P0CX62 438 aa11.09□□□□□ -0.63
YKR040CYKR040C TY2A-CP25383 438 aa11.09□□□□□ -0.63
YKR040CYKR040C CDC12P32468 407 aaKnown RBP11.09□□□□□ -0.63
YKR040CYKR040C RIM101P33400 625 aa11.09□□□□□ -0.63
YKR040CYKR040C CAF4P36130 643 aa11.09□□□□□ -0.63
YKR040CYKR040C YHR210CP38893 341 aa11.09□□□□□ -0.63
YKR040CYKR040C PRM10P42946 383 aa11.09□□□□□ -0.63
YKR040CYKR040C FMP32P43557 207 aa11.09□□□□□ -0.63
YKR040CYKR040C AIM22P47051 409 aa11.09□□□□□ -0.63
YKR040CYKR040C RNR4P49723 345 aaKnown RBP11.09□□□□□ -0.63
YKR040CYKR040C BIO3P50277 480 aa11.09□□□□□ -0.63
YKR040CYKR040C TY2A-DR2Q03483 438 aa11.09□□□□□ -0.63
YKR040CYKR040C GLO2Q05584 274 aa11.09□□□□□ -0.63
YKR040CYKR040C PDR8Q06149 701 aa11.09□□□□□ -0.63
YKR040CYKR040C ERF2Q06551 359 aa11.09□□□□□ -0.63
YKR040CYKR040C YEH2Q07950 538 aa11.09□□□□□ -0.63
YKR040CYKR040C TY2A-BQ12260 438 aa11.09□□□□□ -0.63
YKR040CYKR040C TY2A-OR2Q12293 438 aa11.09□□□□□ -0.63
YKR040CYKR040C TY2A-DR1Q12392 438 aa11.09□□□□□ -0.63
YKR040CYKR040C TY2A-OR1Q12439 438 aa11.09□□□□□ -0.63
YKR040CYKR040C TY2A-DR3Q99303 438 aa11.09□□□□□ -0.63
YKR040CYKR040C HOP09932 586 aa11.08□□□□□ -0.64
YKR040CYKR040C KAR1P11927 433 aa11.08□□□□□ -0.64
YKR040CYKR040C TAH1P25638 111 aaPredicted RBP11.08□□□□□ -0.64
YKR040CYKR040C ATO2P32907 282 aa11.08□□□□□ -0.64
YKR040CYKR040C SUI1P32911 108 aaKnown RBP11.08□□□□□ -0.64
YKR040CYKR040C PTC1P35182 281 aa11.08□□□□□ -0.64
YKR040CYKR040C CAB3P36076 571 aa11.08□□□□□ -0.64
YKR040CYKR040C OMA1P36163 345 aa11.08□□□□□ -0.64
YKR040CYKR040C ATG7P38862 630 aa11.08□□□□□ -0.64
YKR040CYKR040C RPL10P41805 221 aaKnown RBP11.08□□□□□ -0.64
YKR040CYKR040C PRP38Q00723 242 aaPredicted RBP11.08□□□□□ -0.64
YKR040CYKR040C RSM10Q03201 203 aa11.08□□□□□ -0.64
YKR040CYKR040C SWF1Q04629 336 aa11.08□□□□□ -0.64
YKR040CYKR040C UAF30Q08747 228 aa11.08□□□□□ -0.64
YKR040CYKR040C YOR389WQ08912 624 aa11.08□□□□□ -0.64
YKR040CYKR040C YPL278CQ08990 100 aa11.08□□□□□ -0.64
YKR040CYKR040C SLF1Q12034 447 aaKnown RBP11.08□□□□□ -0.64
YKR040CYKR040C YPR064WQ12492 139 aa11.08□□□□□ -0.64
YKR040CYKR040C COR1P07256 457 aa11.07□□□□□ -0.64
YKR040CYKR040C URA4P20051 364 aa11.07□□□□□ -0.64
YKR040CYKR040C IDH2P28241 369 aaKnown RBP11.07□□□□□ -0.64
YKR040CYKR040C UGP1P32861 499 aaKnown RBP11.07□□□□□ -0.64
YKR040CYKR040C YBL029WP38201 376 aa11.07□□□□□ -0.64
YKR040CYKR040C PTR3P43606 678 aa11.07□□□□□ -0.64
YKR040CYKR040C IDP3P53982 420 aaKnown RBP11.07□□□□□ -0.64
YKR040CYKR040C LGE1Q02796 332 aaKnown RBP11.07□□□□□ -0.64
YKR040CYKR040C NTO1Q12311 748 aa11.07□□□□□ -0.64
YKR040CYKR040C GLO4Q12320 285 aa11.07□□□□□ -0.64
YKR040CYKR040C HTA2P04912 132 aa11.06□□□□□ -0.64
YKR040CYKR040C CDC10P25342 322 aaKnown RBP11.06□□□□□ -0.64
YKR040CYKR040C PHO87P25360 923 aa11.06□□□□□ -0.64
YKR040CYKR040C COS111P38308 924 aa11.06□□□□□ -0.64
YKR040CYKR040C ARN1P38731 627 aa11.06□□□□□ -0.64
YKR040CYKR040C YGR012WP53206 393 aa11.06□□□□□ -0.64
YKR040CYKR040C TPP1Q03796 238 aa11.06□□□□□ -0.64
YKR040CYKR040C ECM11Q04110 302 aa11.06□□□□□ -0.64
YKR040CYKR040C APC4Q04601 652 aa11.06□□□□□ -0.64
YKR040CYKR040C GET4Q12125 312 aa11.06□□□□□ -0.64
YKR040CYKR040C HUA2Q12134 243 aa11.06□□□□□ -0.64
YKR040CYKR040C RPN5Q12250 445 aaKnown RBP11.06□□□□□ -0.64
YKR040CYKR040C RPL17AP05740 184 aaKnown RBP11.05□□□□□ -0.64
YKR040CYKR040C BAS1P22035 811 aa11.05□□□□□ -0.64
YKR040CYKR040C YMC1P32331 307 aa11.05□□□□□ -0.64
YKR040CYKR040C AAR2P32357 355 aaPredicted RBP11.05□□□□□ -0.64
YKR040CYKR040C STE14P32584 239 aa11.05□□□□□ -0.64
YKR040CYKR040C SPO23P33757 523 aa11.05□□□□□ -0.64
YKR040CYKR040C FRE2P36033 711 aa11.05□□□□□ -0.64
YKR040CYKR040C RPL17BP46990 184 aaKnown RBP11.05□□□□□ -0.64
YKR040CYKR040C CSL4P53859 292 aaPredicted RBP11.05□□□□□ -0.64
YKR040CYKR040C YDR338CQ05497 695 aa11.05□□□□□ -0.64
YKR040CYKR040C SGT1Q08446 395 aa11.05□□□□□ -0.64
YKR040CYKR040C SAS5Q99314 248 aa11.05□□□□□ -0.64
YKR040CYKR040C STE7P06784 515 aa11.04□□□□□ -0.64
YKR040CYKR040C EXO70P19658 623 aa11.04□□□□□ -0.64
YKR040CYKR040C SLM5P25345 492 aaKnown RBP11.04□□□□□ -0.64
YKR040CYKR040C KAP122P32767 1081 aa11.04□□□□□ -0.64
YKR040CYKR040C PRP39P39682 629 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms