RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W RPI1P23250 407 aaKnown RBP2.26□□□□□ -2.05
RPL40AYIL148W ELO2P25358 347 aa2.26□□□□□ -2.05
RPL40AYIL148W RPS2P25443 254 aaKnown RBP2.26□□□□□ -2.05
RPL40AYIL148W BUD14P27637 709 aa2.26□□□□□ -2.05
RPL40AYIL148W BRF1P29056 596 aa2.26□□□□□ -2.05
RPL40AYIL148W CRM1P30822 1084 aaKnown RBP2.26□□□□□ -2.05
RPL40AYIL148W APE2P32454 952 aaKnown RBP2.26□□□□□ -2.05
RPL40AYIL148W FRE1P32791 686 aa2.26□□□□□ -2.05
RPL40AYIL148W BLI1P35727 113 aa2.26□□□□□ -2.05
RPL40AYIL148W FRE2P36033 711 aa2.26□□□□□ -2.05
RPL40AYIL148W THI2P38141 450 aa2.26□□□□□ -2.05
RPL40AYIL148W EFM2P38347 419 aa2.26□□□□□ -2.05
RPL40AYIL148W YHR054CP38780 354 aa2.26□□□□□ -2.05
RPL40AYIL148W ISC1P40015 477 aaKnown RBP2.26□□□□□ -2.05
RPL40AYIL148W YJL070CP40361 888 aa2.26□□□□□ -2.05
RPL40AYIL148W YJL055WP47044 245 aa2.26□□□□□ -2.05
RPL40AYIL148W YIF1P53845 314 aaKnown RBP2.26□□□□□ -2.05
RPL40AYIL148W BNI5P53890 448 aaKnown RBP2.26□□□□□ -2.05
RPL40AYIL148W CRZ1P53968 678 aa2.26□□□□□ -2.05
RPL40AYIL148W ARX1Q03862 593 aaKnown RBP2.26□□□□□ -2.05
RPL40AYIL148W GYL1Q04322 720 aa2.26□□□□□ -2.05
RPL40AYIL148W RBA50Q04418 439 aa2.26□□□□□ -2.05
RPL40AYIL148W HSP31Q04432 237 aa2.26□□□□□ -2.05
RPL40AYIL148W DIS3Q08162 1001 aaKnown RBP2.26□□□□□ -2.05
RPL40AYIL148W DCI1Q08558 271 aa2.26□□□□□ -2.05
RPL40AYIL148W MUM3Q08750 479 aa2.26□□□□□ -2.05
RPL40AYIL148W SUC2P00724 532 aa2.25□□□□□ -2.05
RPL40AYIL148W HIS4P00815 799 aaKnown RBP2.25□□□□□ -2.05
RPL40AYIL148W HOM3P10869 527 aa2.25□□□□□ -2.05
RPL40AYIL148W URA4P20051 364 aa2.25□□□□□ -2.05
RPL40AYIL148W CPR2P23285 205 aa2.25□□□□□ -2.05
RPL40AYIL148W PPZ1P26570 692 aa2.25□□□□□ -2.05
RPL40AYIL148W YIM1P28625 365 aa2.25□□□□□ -2.05
RPL40AYIL148W NDC1P32500 655 aa2.25□□□□□ -2.05
RPL40AYIL148W SIP2P34164 415 aaKnown RBP2.25□□□□□ -2.05
RPL40AYIL148W YBP1P38315 674 aa2.25□□□□□ -2.05
RPL40AYIL148W RTT107P38850 1070 aa2.25□□□□□ -2.05
RPL40AYIL148W VPS52P39904 641 aa2.25□□□□□ -2.05
RPL40AYIL148W SHO1P40073 367 aa2.25□□□□□ -2.05
RPL40AYIL148W SYG1P40528 902 aa2.25□□□□□ -2.05
RPL40AYIL148W BUD27P43573 796 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
RPL40AYIL148W PNG1Q02890 363 aa2.25□□□□□ -2.05
RPL40AYIL148W GIP3Q03016 1276 aa2.25□□□□□ -2.05
RPL40AYIL148W RCF1Q03713 159 aa2.25□□□□□ -2.05
RPL40AYIL148W YDR387CQ04162 555 aa2.25□□□□□ -2.05
RPL40AYIL148W TAP42Q04372 366 aa2.25□□□□□ -2.05
RPL40AYIL148W SYO1Q07395 620 aa2.25□□□□□ -2.05
RPL40AYIL148W AEP3Q12089 606 aa2.25□□□□□ -2.05
RPL40AYIL148W VAM3Q12241 283 aa2.25□□□□□ -2.05
RPL40AYIL148W YLR278CQ05854 1341 aa2.24□□□□□ -2.05
RPL40AYIL148W PDE2P06776 526 aa2.24□□□□□ -2.05
RPL40AYIL148W YML002WP0CF17 737 aa2.24□□□□□ -2.05
RPL40AYIL148W SPO7P18410 259 aa2.24□□□□□ -2.05
RPL40AYIL148W SGV1P23293 657 aaKnown RBP2.24□□□□□ -2.05
RPL40AYIL148W RHB1P25378 209 aa2.24□□□□□ -2.05
RPL40AYIL148W BUB3P26449 341 aa2.24□□□□□ -2.05
RPL40AYIL148W BEM1P29366 551 aa2.24□□□□□ -2.05
RPL40AYIL148W ATP11P32453 318 aa2.24□□□□□ -2.05
RPL40AYIL148W RRP1P35178 278 aaPredicted RBP2.24□□□□□ -2.05
RPL40AYIL148W GDI1P39958 451 aaKnown RBP2.24□□□□□ -2.05
RPL40AYIL148W FAU1P40099 211 aa2.24□□□□□ -2.05
RPL40AYIL148W TFG2P41896 400 aaPredicted RBP2.24□□□□□ -2.05
RPL40AYIL148W GUF1P46943 645 aa2.24□□□□□ -2.05
RPL40AYIL148W ECM27P47144 725 aa2.24□□□□□ -2.05
RPL40AYIL148W PCP1P53259 346 aa2.24□□□□□ -2.05
RPL40AYIL148W YGR111WP53265 400 aa2.24□□□□□ -2.05
RPL40AYIL148W YGR250CP53316 781 aaKnown RBP2.24□□□□□ -2.05
RPL40AYIL148W SLG1P54867 378 aa2.24□□□□□ -2.05
RPL40AYIL148W RLI1Q03195 608 aaKnown RBP2.24□□□□□ -2.05
RPL40AYIL148W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
RPL40AYIL148W SET6Q12529 373 aa2.24□□□□□ -2.05
RPL40AYIL148W HIP1P06775 603 aa2.23□□□□□ -2.05
RPL40AYIL148W RIP1P08067 215 aa2.23□□□□□ -2.05
RPL40AYIL148W RPL20AP0CX23 172 aaKnown RBP2.23□□□□□ -2.05
RPL40AYIL148W RPL20BP0CX24 172 aaPredicted RBP2.23□□□□□ -2.05
RPL40AYIL148W CLN1P20437 546 aa2.23□□□□□ -2.05
RPL40AYIL148W MNE1P24720 663 aa2.23□□□□□ -2.05
RPL40AYIL148W YCR100CP25606 316 aa2.23□□□□□ -2.05
RPL40AYIL148W ERV1P27882 189 aa2.23□□□□□ -2.05
RPL40AYIL148W URA7P28274 579 aaKnown RBP2.23□□□□□ -2.05
RPL40AYIL148W NDI1P32340 513 aa2.23□□□□□ -2.05
RPL40AYIL148W HIR2P32480 875 aa2.23□□□□□ -2.05
RPL40AYIL148W PRP21P32524 280 aaPredicted RBP2.23□□□□□ -2.05
RPL40AYIL148W MDL1P33310 695 aa2.23□□□□□ -2.05
RPL40AYIL148W RRT2P38332 387 aa2.23□□□□□ -2.05
RPL40AYIL148W MDM31P38880 579 aa2.23□□□□□ -2.05
RPL40AYIL148W YER130CP39959 443 aa2.23□□□□□ -2.05
RPL40AYIL148W YAT2P40017 923 aa2.23□□□□□ -2.05
RPL40AYIL148W ALG8P40351 577 aa2.23□□□□□ -2.05
RPL40AYIL148W JEM1P40358 645 aa2.23□□□□□ -2.05
RPL40AYIL148W YFL067WP43537 175 aa2.23□□□□□ -2.05
RPL40AYIL148W GWT1P47026 490 aa2.23□□□□□ -2.05
RPL40AYIL148W RTT101P47050 842 aa2.23□□□□□ -2.05
RPL40AYIL148W SSN8P47821 323 aa2.23□□□□□ -2.05
RPL40AYIL148W DRN1P53255 507 aaKnown RBP2.23□□□□□ -2.05
RPL40AYIL148W ACL4Q03771 387 aa2.23□□□□□ -2.05
RPL40AYIL148W YDR131CQ03899 556 aa2.23□□□□□ -2.05
RPL40AYIL148W BNA5Q05979 453 aa2.23□□□□□ -2.05
RPL40AYIL148W DCS1Q06151 350 aa2.23□□□□□ -2.05
RPL40AYIL148W DAP1Q12091 152 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms