RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	ATG29	Q12092	213 aa		2.89	□□□□□ -1.95
VHR1	YIL056W	AYT1	Q12226	474 aa		2.89	□□□□□ -1.95
VHR1	YIL056W	PGA3	Q12746	312 aa	Known RBP	2.89	□□□□□ -1.95
VHR1	YIL056W	YDL007C-A	Q2V2Q0	85 aa		2.89	□□□□□ -1.95
VHR1	YIL056W	GPI10	P30777	616 aa		2.89	□□□□□ -1.95
VHR1	YIL056W	ATS1	P31386	333 aa		2.89	□□□□□ -1.95
VHR1	YIL056W	AGA1	P32323	725 aa		2.89	□□□□□ -1.95
VHR1	YIL056W	MRE11	P32829	692 aa		2.89	□□□□□ -1.95
VHR1	YIL056W	RPR2	P40571	144 aa		2.89	□□□□□ -1.95
VHR1	YIL056W	NCS2	P53923	493 aa	Predicted RBP	2.89	□□□□□ -1.95
VHR1	YIL056W	RBS1	Q05672	457 aa	Known RBP	2.89	□□□□□ -1.95
VHR1	YIL056W	SMF3	Q12078	473 aa	Predicted RBP	2.89	□□□□□ -1.95
VHR1	YIL056W	CFT2	Q12102	859 aa	Predicted RBP	2.89	□□□□□ -1.95
VHR1	YIL056W	YBR298C-A	Q8TGK4	73 aa		2.89	□□□□□ -1.95
VHR1	YIL056W	LEU4	P06208	619 aa	Known RBP	2.88	□□□□□ -1.95
VHR1	YIL056W	PRP16	P15938	1071 aa	Predicted RBP	2.88	□□□□□ -1.95
VHR1	YIL056W	VMA2	P16140	517 aa	Known RBP	2.88	□□□□□ -1.95
VHR1	YIL056W	PDX1	P16451	410 aa		2.88	□□□□□ -1.95
VHR1	YIL056W	CPR3	P25719	182 aa		2.88	□□□□□ -1.95
VHR1	YIL056W	IDH2	P28241	369 aa	Known RBP	2.88	□□□□□ -1.95
VHR1	YIL056W	AFG1	P32317	509 aa		2.88	□□□□□ -1.95
VHR1	YIL056W	REC114	P32841	428 aa		2.88	□□□□□ -1.95
VHR1	YIL056W	PMT1	P33775	817 aa		2.88	□□□□□ -1.95
VHR1	YIL056W	CMC1	P36064	111 aa		2.88	□□□□□ -1.95
VHR1	YIL056W	BYE1	P36106	594 aa		2.88	□□□□□ -1.95
VHR1	YIL056W	UTP9	P38882	575 aa	Known RBP	2.88	□□□□□ -1.95
VHR1	YIL056W	YEL057C	P39983	233 aa		2.88	□□□□□ -1.95
VHR1	YIL056W	LSM5	P40089	93 aa	Known RBP	2.88	□□□□□ -1.95
VHR1	YIL056W	MET28	P40573	187 aa		2.88	□□□□□ -1.95
VHR1	YIL056W	HXT14	P42833	540 aa		2.88	□□□□□ -1.95
VHR1	YIL056W	YJL132W	P47014	750 aa		2.88	□□□□□ -1.95
VHR1	YIL056W	URB2	P47108	1174 aa		2.88	□□□□□ -1.95
VHR1	YIL056W	WSC2	P53832	503 aa		2.88	□□□□□ -1.95
VHR1	YIL056W	HOT1	Q03213	719 aa		2.88	□□□□□ -1.95
VHR1	YIL056W	ERP1	Q05359	219 aa	Known RBP	2.88	□□□□□ -1.95
VHR1	YIL056W	CUE5	Q08412	411 aa	Known RBP	2.88	□□□□□ -1.95
VHR1	YIL056W	REC107	P21651	314 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	ELO2	P25358	347 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	RAD14	P28519	371 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	DBF4	P32325	704 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	IME2	P32581	645 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	FRE2	P36033	711 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	YFL067W	P43537	175 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	MDE1	P47095	244 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	BNI5	P53890	448 aa	Known RBP	2.87	□□□□□ -1.95
VHR1	YIL056W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.87	□□□□□ -1.95	not detected
VHR1	YIL056W	RPM2	Q02773	1202 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	YLH47	Q06493	454 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	APC5	Q08683	685 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	RRP36	Q12481	300 aa	Predicted RBP	2.87	□□□□□ -1.95
VHR1	YIL056W	SAC3	P46674	1301 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	SUC2	P00724	532 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	STF1	P01098	86 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	MET17	P06106	444 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	RPC40	P07703	335 aa	Known RBP	2.87	□□□□□ -1.95
VHR1	YIL056W	SRV2	P17555	526 aa	Known RBP	2.87	□□□□□ -1.95
VHR1	YIL056W	TRX1	P22217	103 aa	Known RBP	2.87	□□□□□ -1.95
VHR1	YIL056W	FUN19	P28003	413 aa	Predicted RBP	2.87	□□□□□ -1.95
VHR1	YIL056W	ERG3	P32353	365 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	OTU2	P38747	307 aa	Known RBP	2.87	□□□□□ -1.95
VHR1	YIL056W	KRE9	P39005	276 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	GWT1	P47026	490 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	YDL186W	P48568	277 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	RMD9	P53140	646 aa	Known RBP	2.87	□□□□□ -1.95
VHR1	YIL056W	DRN1	P53255	507 aa	Known RBP	2.87	□□□□□ -1.95
VHR1	YIL056W	IMP4	P53941	290 aa	Known RBP	2.87	□□□□□ -1.95
VHR1	YIL056W	PRP42	Q03776	544 aa	Known RBP	2.87	□□□□□ -1.95
VHR1	YIL056W	RNH1	Q04740	348 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	HCR1	Q05775	265 aa	Known RBP	2.87	□□□□□ -1.95
VHR1	YIL056W	REX3	Q12090	404 aa		2.87	□□□□□ -1.95
VHR1	YIL056W	YAR066W	P0CX18	203 aa		2.86	□□□□□ -1.95
VHR1	YIL056W	YHR214W	P0CX19	203 aa		2.86	□□□□□ -1.95
VHR1	YIL056W	ATR1	P13090	542 aa		2.86	□□□□□ -1.95
VHR1	YIL056W	RPL3	P14126	387 aa	Known RBP	2.86	□□□□□ -1.95
VHR1	YIL056W	CPR1	P14832	162 aa	Known RBP	2.86	□□□□□ -1.95
VHR1	YIL056W	AMD1	P15274	810 aa	Known RBP	2.86	□□□□□ -1.95
VHR1	YIL056W	CKA1	P15790	372 aa		2.86	□□□□□ -1.95
VHR1	YIL056W	RAD51	P25454	400 aa		2.86	□□□□□ -1.95
VHR1	YIL056W	ISC1	P40015	477 aa	Known RBP	2.86	□□□□□ -1.95
VHR1	YIL056W	MNP1	P53163	194 aa	Predicted RBP	2.86	□□□□□ -1.95
VHR1	YIL056W	BNA5	Q05979	453 aa		2.86	□□□□□ -1.95
VHR1	YIL056W	RHO2	P06781	192 aa		2.85	□□□□□ -1.95
VHR1	YIL056W	RTT105	P40063	208 aa		2.85	□□□□□ -1.95
VHR1	YIL056W	PCL7	P40186	285 aa		2.85	□□□□□ -1.95
VHR1	YIL056W	YGR149W	P48236	432 aa		2.85	□□□□□ -1.95
VHR1	YIL056W	YGL108C	P53139	140 aa		2.85	□□□□□ -1.95
VHR1	YIL056W	PIR3	Q03180	325 aa		2.85	□□□□□ -1.95
VHR1	YIL056W	YMR155W	Q03795	547 aa		2.85	□□□□□ -1.95
VHR1	YIL056W	YDR131C	Q03899	556 aa		2.85	□□□□□ -1.95
VHR1	YIL056W	MRD1	Q06106	887 aa	Known RBP	2.85	□□□□□ -1.95
VHR1	YIL056W	YLR345W	Q06137	509 aa		2.85	□□□□□ -1.95
VHR1	YIL056W	HEM2	P05373	342 aa		2.85	□□□□□ -1.95
VHR1	YIL056W	RNA1	P11745	407 aa	Known RBP	2.85	□□□□□ -1.95
VHR1	YIL056W	ROX1	P25042	368 aa		2.85	□□□□□ -1.95
VHR1	YIL056W	YCR022C	P25620	114 aa		2.85	□□□□□ -1.95
VHR1	YIL056W	TFB1	P32776	642 aa		2.85	□□□□□ -1.95
VHR1	YIL056W	MDL1	P33310	695 aa		2.85	□□□□□ -1.95
VHR1	YIL056W	RIB7	P33312	244 aa		2.85	□□□□□ -1.95
VHR1	YIL056W	YJL055W	P47044	245 aa		2.85	□□□□□ -1.95
VHR1	YIL056W	HST1	P53685	503 aa		2.85	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 145.2 ms