RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C YCR015CP25616 317 aa5.55□□□□□ -1.52
SFB3YHR098C APE2P32454 952 aaKnown RBP5.55□□□□□ -1.52
SFB3YHR098C BEM3P32873 1128 aa5.55□□□□□ -1.52
SFB3YHR098C DCW1P36091 449 aa5.55□□□□□ -1.52
SFB3YHR098C MRPL3P36516 390 aa5.55□□□□□ -1.52
SFB3YHR098C AHP1P38013 176 aaKnown RBP5.55□□□□□ -1.52
SFB3YHR098C IMD2P38697 523 aaKnown RBP5.55□□□□□ -1.52
SFB3YHR098C CCT8P47079 568 aaKnown RBP5.55□□□□□ -1.52
SFB3YHR098C ELA1P53861 379 aaPredicted RBP5.55□□□□□ -1.52
SFB3YHR098C CSN9Q03981 162 aa5.55□□□□□ -1.52
SFB3YHR098C SNX41Q04053 625 aa5.55□□□□□ -1.52
SFB3YHR098C GPI11Q06636 219 aa5.55□□□□□ -1.52
SFB3YHR098C YOR352WQ08816 343 aa5.55□□□□□ -1.52
SFB3YHR098C ENV7Q12003 364 aa5.55□□□□□ -1.52
SFB3YHR098C SLF1Q12034 447 aaKnown RBP5.55□□□□□ -1.52
SFB3YHR098C YOL107WQ12239 342 aa5.55□□□□□ -1.52
SFB3YHR098C PFK27Q12471 397 aaPredicted RBP5.55□□□□□ -1.52
SFB3YHR098C YPL119C-AQ3E751 87 aa5.55□□□□□ -1.52
SFB3YHR098C SUC2P00724 532 aa5.55□□□□□ -1.52
SFB3YHR098C CBP6P07253 162 aaPredicted RBP5.55□□□□□ -1.52
SFB3YHR098C GCY1P14065 312 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
SFB3YHR098C ASK1P35734 292 aa5.55□□□□□ -1.52
SFB3YHR098C CBT1P36038 271 aaPredicted RBP5.55□□□□□ -1.52
SFB3YHR098C YBR056WP38081 501 aa5.55□□□□□ -1.52
SFB3YHR098C STB5P38699 743 aa5.55□□□□□ -1.52
SFB3YHR098C RBG1P39729 369 aa5.55□□□□□ -1.52
SFB3YHR098C PAC1P39946 494 aaKnown RBP5.55□□□□□ -1.52
SFB3YHR098C HXT9P40885 567 aa5.55□□□□□ -1.52
SFB3YHR098C QRI7P43122 407 aa5.55□□□□□ -1.52
SFB3YHR098C LSM1P47017 172 aaKnown RBP5.55□□□□□ -1.52
SFB3YHR098C PPT1P53043 513 aa5.55□□□□□ -1.52
SFB3YHR098C BUD32P53323 261 aa5.55□□□□□ -1.52
SFB3YHR098C ACS1Q01574 713 aa5.55□□□□□ -1.52
SFB3YHR098C NUP49Q02199 472 aa5.55□□□□□ -1.52
SFB3YHR098C PML39Q03760 334 aa5.55□□□□□ -1.52
SFB3YHR098C PPN1Q04119 674 aa5.55□□□□□ -1.52
SFB3YHR098C GRS2Q06817 618 aa5.55□□□□□ -1.52
SFB3YHR098C KEL3Q08979 651 aaPredicted RBP5.55□□□□□ -1.52
SFB3YHR098C TRM8Q12009 286 aa5.55□□□□□ -1.52
SFB3YHR098C ICL2Q12031 575 aa5.55□□□□□ -1.52
SFB3YHR098C MHF1Q3E835 90 aa5.55□□□□□ -1.52
SFB3YHR098C ART10P18634 518 aaKnown RBP5.54□□□□□ -1.52
SFB3YHR098C CHL1P22516 861 aaPredicted RBP5.54□□□□□ -1.52
SFB3YHR098C MIH1P23748 554 aa5.54□□□□□ -1.52
SFB3YHR098C GID7P25569 745 aa5.54□□□□□ -1.52
SFB3YHR098C FRE1P32791 686 aa5.54□□□□□ -1.52
SFB3YHR098C AFR1P33304 620 aa5.54□□□□□ -1.52
SFB3YHR098C ATG19P35193 415 aa5.54□□□□□ -1.52
SFB3YHR098C APN2P38207 520 aa5.54□□□□□ -1.52
SFB3YHR098C LRP1P38801 184 aaKnown RBP5.54□□□□□ -1.52
SFB3YHR098C LSM5P40089 93 aaKnown RBP5.54□□□□□ -1.52
SFB3YHR098C IMA5P40884 581 aa5.54□□□□□ -1.52
SFB3YHR098C SPT20P50875 604 aa5.54□□□□□ -1.52
SFB3YHR098C PUS2P53167 370 aa5.54□□□□□ -1.52
SFB3YHR098C SLI1P53304 468 aa5.54□□□□□ -1.52
SFB3YHR098C YNL165WP53891 406 aa5.54□□□□□ -1.52
SFB3YHR098C REG1Q00816 1014 aa5.54□□□□□ -1.52
SFB3YHR098C TRM82Q03774 444 aa5.54□□□□□ -1.52
SFB3YHR098C VHS1Q03785 461 aa5.54□□□□□ -1.52
SFB3YHR098C TIF35Q04067 274 aaKnown RBP5.54□□□□□ -1.52
SFB3YHR098C YDR514CQ04408 483 aa5.54□□□□□ -1.52
SFB3YHR098C ECM38Q05902 660 aaPredicted RBP5.54□□□□□ -1.52
SFB3YHR098C EAF1Q06337 982 aa5.54□□□□□ -1.52
SFB3YHR098C ECM30Q06673 1274 aa5.54□□□□□ -1.52
SFB3YHR098C YGL194C-AQ2V2P6 80 aa5.54□□□□□ -1.52
SFB3YHR098C YOL159C-AQ3E769 90 aa5.54□□□□□ -1.52
SFB3YHR098C SEC53P07283 254 aaKnown RBP5.54□□□□□ -1.52
SFB3YHR098C SRD1P09007 221 aa5.54□□□□□ -1.52
SFB3YHR098C RPL3P14126 387 aaKnown RBP5.54□□□□□ -1.52
SFB3YHR098C RIM11P38615 370 aa5.54□□□□□ -1.52
SFB3YHR098C OSH7P38755 437 aa5.54□□□□□ -1.52
SFB3YHR098C FSH1P38777 243 aaKnown RBP5.54□□□□□ -1.52
SFB3YHR098C PAN5P38787 379 aa5.54□□□□□ -1.52
SFB3YHR098C BFR1P38934 470 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52 RIP-Chip
SFB3YHR098C RPN3P40016 523 aaKnown RBP5.54□□□□□ -1.52
SFB3YHR098C PYK2P52489 506 aaKnown RBP5.54□□□□□ -1.52
SFB3YHR098C UBC12P52491 188 aa5.54□□□□□ -1.52
SFB3YHR098C GPD1Q00055 391 aaKnown RBP5.54□□□□□ -1.52
SFB3YHR098C MTD1Q02046 320 aaKnown RBP5.54□□□□□ -1.52
SFB3YHR098C DOT1Q04089 582 aaKnown RBP5.54□□□□□ -1.52
SFB3YHR098C WHI4Q07655 649 aaKnown RBP5.54□□□□□ -1.52
SFB3YHR098C TPO1Q07824 586 aa5.54□□□□□ -1.52
SFB3YHR098C LAG2Q92325 660 aa5.54□□□□□ -1.52
SFB3YHR098C TRP3P00937 484 aa5.53□□□□□ -1.52
SFB3YHR098C ARG3P05150 338 aa5.53□□□□□ -1.52
SFB3YHR098C STE12P13574 688 aa5.53□□□□□ -1.52
SFB3YHR098C VMA3P25515 160 aa5.53□□□□□ -1.52
SFB3YHR098C HRR25P29295 494 aaKnown RBP5.53□□□□□ -1.52
SFB3YHR098C VPS17P32913 551 aa5.53□□□□□ -1.52
SFB3YHR098C HIS7P33734 552 aaKnown RBP5.53□□□□□ -1.52
SFB3YHR098C ROT2P38138 954 aa5.53□□□□□ -1.52
SFB3YHR098C CDS1P38221 457 aa5.53□□□□□ -1.52
SFB3YHR098C YER034WP40022 185 aaKnown RBP5.53□□□□□ -1.52
SFB3YHR098C PCL6P40038 420 aa5.53□□□□□ -1.52
SFB3YHR098C DOT6P40059 670 aaKnown RBP5.53□□□□□ -1.52
SFB3YHR098C GTT1P40582 234 aa5.53□□□□□ -1.52
SFB3YHR098C YJL016WP47072 561 aa5.53□□□□□ -1.52
SFB3YHR098C JAC1P53193 184 aa5.53□□□□□ -1.52
SFB3YHR098C GTF1P53260 183 aaPredicted RBP5.53□□□□□ -1.52
SFB3YHR098C YLR225CQ05948 407 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms