RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C SPE4Q12455 300 aa12.61□□□□□ -0.39
SHU1YHL006C IPP1P00817 287 aaKnown RBP12.6□□□□□ -0.39
SHU1YHL006C PET127P32606 800 aa12.6□□□□□ -0.39
SHU1YHL006C MAD3P47074 515 aa12.6□□□□□ -0.39
SHU1YHL006C YGR053CP53234 283 aa12.6□□□□□ -0.39
SHU1YHL006C SLM2P53955 656 aa12.6□□□□□ -0.39
SHU1YHL006C MDM30Q05930 598 aa12.6□□□□□ -0.39
SHU1YHL006C BDS1Q08347 646 aa12.6□□□□□ -0.39
SHU1YHL006C PUS9Q12069 462 aa12.6□□□□□ -0.39
SHU1YHL006C YPR064WQ12492 139 aa12.6□□□□□ -0.39
SHU1YHL006C YPT1P01123 206 aaKnown RBP12.59□□□□□ -0.39
SHU1YHL006C COR1P07256 457 aa12.59□□□□□ -0.39
SHU1YHL006C COS2P0CX12 379 aa12.59□□□□□ -0.39
SHU1YHL006C COS3P0CX13 379 aa12.59□□□□□ -0.39
SHU1YHL006C CDC26P14724 124 aa12.59□□□□□ -0.39
SHU1YHL006C SRV2P17555 526 aaKnown RBP12.59□□□□□ -0.39
SHU1YHL006C YMC1P32331 307 aa12.59□□□□□ -0.39
SHU1YHL006C HES1P35843 434 aa12.59□□□□□ -0.39
SHU1YHL006C EAP1P36041 632 aaKnown RBP12.59□□□□□ -0.39
SHU1YHL006C YBR032WP38223 100 aa12.59□□□□□ -0.39
SHU1YHL006C PRM10P42946 383 aa12.59□□□□□ -0.39
SHU1YHL006C COS4P43542 379 aa12.59□□□□□ -0.39
SHU1YHL006C SDT1P53078 280 aa12.59□□□□□ -0.39
SHU1YHL006C PDR8Q06149 701 aa12.59□□□□□ -0.39
SHU1YHL006C GLO4Q12320 285 aa12.59□□□□□ -0.39
SHU1YHL006C MEC1P38111 2368 aa12.59□□□□□ -0.39
SHU1YHL006C DST1P07273 309 aa12.58□□□□□ -0.4
SHU1YHL006C GCD2P12754 651 aaPredicted RBP12.58□□□□□ -0.4
SHU1YHL006C PRI2P20457 528 aa12.58□□□□□ -0.4
SHU1YHL006C SEC62P21825 274 aa12.58□□□□□ -0.4
SHU1YHL006C CPR3P25719 182 aa12.58□□□□□ -0.4
SHU1YHL006C MUD2P36084 527 aaKnown RBP12.58□□□□□ -0.4
SHU1YHL006C OMA1P36163 345 aa12.58□□□□□ -0.4
SHU1YHL006C SEC31P38968 1273 aaKnown RBP12.58□□□□□ -0.4
SHU1YHL006C BIO3P50277 480 aa12.58□□□□□ -0.4
SHU1YHL006C MET31Q03081 177 aa12.58□□□□□ -0.4
SHU1YHL006C YMR111CQ04461 462 aaPredicted RBP12.58□□□□□ -0.4
SHU1YHL006C FAR8Q05040 523 aa12.58□□□□□ -0.4
SHU1YHL006C REH1Q06709 432 aa12.58□□□□□ -0.4
SHU1YHL006C TMS1Q12116 473 aa12.58□□□□□ -0.4
SHU1YHL006C TY2A-LR1P0C2J4 438 aa12.57□□□□□ -0.4
SHU1YHL006C TY2A-FP0CX61 438 aa12.57□□□□□ -0.4
SHU1YHL006C TY2A-GR2P0CX62 438 aa12.57□□□□□ -0.4
SHU1YHL006C TY2A-CP25383 438 aa12.57□□□□□ -0.4
SHU1YHL006C OAR1P35731 278 aa12.57□□□□□ -0.4
SHU1YHL006C MET18P40469 1032 aa12.57□□□□□ -0.4
SHU1YHL006C ARC1P46672 376 aaKnown RBP12.57□□□□□ -0.4
SHU1YHL006C LCL3P53153 274 aa12.57□□□□□ -0.4
SHU1YHL006C YNL140CP53910 189 aa12.57□□□□□ -0.4
SHU1YHL006C TY2A-DR2Q03483 438 aa12.57□□□□□ -0.4
SHU1YHL006C NMD4Q12129 218 aa12.57□□□□□ -0.4
SHU1YHL006C TY2A-BQ12260 438 aa12.57□□□□□ -0.4
SHU1YHL006C TY2A-OR2Q12293 438 aa12.57□□□□□ -0.4
SHU1YHL006C TY2A-DR1Q12392 438 aa12.57□□□□□ -0.4
SHU1YHL006C TY2A-OR1Q12439 438 aa12.57□□□□□ -0.4
SHU1YHL006C TY2A-DR3Q99303 438 aa12.57□□□□□ -0.4
SHU1YHL006C Q0010Q9ZZX9 128 aa12.57□□□□□ -0.4
SHU1YHL006C HXK2P04807 486 aaKnown RBP12.56□□□□□ -0.4
SHU1YHL006C BUB2P26448 306 aaPredicted RBP12.56□□□□□ -0.4
SHU1YHL006C ZIP1P31111 875 aa12.56□□□□□ -0.4
SHU1YHL006C LST4P34239 828 aa12.56□□□□□ -0.4
SHU1YHL006C PRP39P39682 629 aaKnown RBP12.56□□□□□ -0.4
SHU1YHL006C FMP52P40008 231 aa12.56□□□□□ -0.4
SHU1YHL006C ARB1P40024 610 aaKnown RBP12.56□□□□□ -0.4
SHU1YHL006C APC4Q04601 652 aa12.56□□□□□ -0.4
SHU1YHL006C GAD1Q04792 585 aa12.56□□□□□ -0.4
SHU1YHL006C SFH1Q06168 426 aa12.56□□□□□ -0.4
SHU1YHL006C CDA1Q06702 301 aa12.56□□□□□ -0.4
SHU1YHL006C YOR223WQ12015 292 aa12.56□□□□□ -0.4
SHU1YHL006C VPS33P20795 691 aa12.55□□□□□ -0.4
SHU1YHL006C HEM3P28789 327 aa12.55□□□□□ -0.4
SHU1YHL006C MEP2P41948 499 aa12.55□□□□□ -0.4
SHU1YHL006C YET2Q04210 160 aa12.55□□□□□ -0.4
SHU1YHL006C RAX1Q08760 435 aa12.55□□□□□ -0.4
SHU1YHL006C YPL272CQ08984 517 aa12.55□□□□□ -0.4
SHU1YHL006C NCA2Q12374 616 aa12.55□□□□□ -0.4
SHU1YHL006C OCA4P25366 362 aa12.54□□□□□ -0.4
SHU1YHL006C YCR051WP25631 222 aa12.54□□□□□ -0.4
SHU1YHL006C IDH2P28241 369 aaKnown RBP12.54□□□□□ -0.4
SHU1YHL006C YJU2P28320 278 aaPredicted RBP12.54□□□□□ -0.4
SHU1YHL006C ORC2P32833 620 aa12.54□□□□□ -0.4
SHU1YHL006C SCS2P40075 244 aaKnown RBP12.54□□□□□ -0.4
SHU1YHL006C BAP3P41815 604 aa12.54□□□□□ -0.4
SHU1YHL006C TIM54P47045 478 aa12.54□□□□□ -0.4
SHU1YHL006C TVP15Q03860 143 aa12.54□□□□□ -0.4
SHU1YHL006C AKR2Q12013 749 aa12.54□□□□□ -0.4
SHU1YHL006C YMR085WP0CF18 432 aa12.53□□□□□ -0.4
SHU1YHL006C BNA4P38169 460 aa12.53□□□□□ -0.4
SHU1YHL006C STE24P47154 453 aa12.53□□□□□ -0.4
SHU1YHL006C RAD17P48581 401 aa12.53□□□□□ -0.4
SHU1YHL006C NOP19P53317 196 aaPredicted RBP12.53□□□□□ -0.4
SHU1YHL006C CDA2Q06703 312 aa12.53□□□□□ -0.4
SHU1YHL006C NBA1Q08229 501 aaKnown RBP12.53□□□□□ -0.4
SHU1YHL006C YLL054CQ12244 843 aa12.53□□□□□ -0.4
SHU1YHL006C TRP3P00937 484 aa12.52□□□□□ -0.41
SHU1YHL006C KAR1P11927 433 aa12.52□□□□□ -0.41
SHU1YHL006C NPR1P22211 790 aa12.52□□□□□ -0.41
SHU1YHL006C NAM9P27929 486 aa12.52□□□□□ -0.41
SHU1YHL006C PMT2P31382 759 aa12.52□□□□□ -0.41
SHU1YHL006C VPS21P36017 210 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms