RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C OTU1P43558 301 aa6.35□□□□□ -1.39
SHO1YER118C ATG27P46989 271 aa6.35□□□□□ -1.39
SHO1YER118C BIO3P50277 480 aa6.35□□□□□ -1.39
SHO1YER118C RPS15Q01855 142 aaKnown RBP6.35□□□□□ -1.39
SHO1YER118C STD1Q02794 444 aa6.35□□□□□ -1.39
SHO1YER118C TEN1Q07921 160 aa6.35□□□□□ -1.39
SHO1YER118C HMI1Q12039 706 aa6.35□□□□□ -1.39
SHO1YER118C IKI3Q06706 1349 aaKnown RBP6.34□□□□□ -1.39
SHO1YER118C COX3P00420 269 aa6.34□□□□□ -1.39
SHO1YER118C RPL24AP04449 155 aaKnown RBP6.34□□□□□ -1.39
SHO1YER118C RHO2P06781 192 aa6.34□□□□□ -1.39
SHO1YER118C RIP1P08067 215 aa6.34□□□□□ -1.39
SHO1YER118C PEP5P12868 1029 aa6.34□□□□□ -1.39
SHO1YER118C THR4P16120 514 aaKnown RBP6.34□□□□□ -1.39
SHO1YER118C GAC1P28006 793 aa6.34□□□□□ -1.39
SHO1YER118C GAR1P28007 205 aaKnown RBP6.34□□□□□ -1.39
SHO1YER118C ECM25P32525 599 aa6.34□□□□□ -1.39
SHO1YER118C SPR1P32603 445 aa6.34□□□□□ -1.39
SHO1YER118C ELF1P36053 145 aa6.34□□□□□ -1.39
SHO1YER118C YKL023WP36103 277 aaKnown RBP6.34□□□□□ -1.39
SHO1YER118C SKN7P38889 622 aa6.34□□□□□ -1.39
SHO1YER118C HRB1P38922 454 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
SHO1YER118C CIN4P39110 191 aa6.34□□□□□ -1.39
SHO1YER118C ICP55P40051 511 aa6.34□□□□□ -1.39
SHO1YER118C FMC1P40491 155 aa6.34□□□□□ -1.39
SHO1YER118C YRB2P40517 327 aa6.34□□□□□ -1.39
SHO1YER118C YFR020WP43600 232 aa6.34□□□□□ -1.39
SHO1YER118C MSC1Q03104 513 aa6.34□□□□□ -1.39
SHO1YER118C RSN1Q03516 953 aa6.34□□□□□ -1.39
SHO1YER118C GPN3Q06543 272 aa6.34□□□□□ -1.39
SHO1YER118C POS5Q06892 414 aa6.34□□□□□ -1.39
SHO1YER118C YOL159CQ08300 171 aa6.34□□□□□ -1.39
SHO1YER118C RKM1Q08961 583 aaPredicted RBP6.34□□□□□ -1.39
SHO1YER118C PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39 RIP-Chip
SHO1YER118C CFT1Q06632 1357 aaKnown RBP6.33□□□□□ -1.4
SHO1YER118C ARG4P04076 463 aaPredicted RBP6.33□□□□□ -1.4
SHO1YER118C MGR1P25573 417 aa6.33□□□□□ -1.4
SHO1YER118C RPL32P38061 130 aaKnown RBP6.33□□□□□ -1.4
SHO1YER118C GPI16P38875 610 aa6.33□□□□□ -1.4
SHO1YER118C BNA6P43619 295 aa6.33□□□□□ -1.4
SHO1YER118C YNL146WP53906 100 aa6.33□□□□□ -1.4
SHO1YER118C YNL092WP53934 400 aa6.33□□□□□ -1.4
SHO1YER118C SLG1P54867 378 aa6.33□□□□□ -1.4
SHO1YER118C UBP16Q02863 499 aa6.33□□□□□ -1.4
SHO1YER118C ECM30Q06673 1274 aa6.33□□□□□ -1.4
SHO1YER118C NRT1Q08485 598 aa6.33□□□□□ -1.4
SHO1YER118C YPK1P12688 680 aaKnown RBP6.32□□□□□ -1.4
SHO1YER118C SPE2P21182 396 aa6.32□□□□□ -1.4
SHO1YER118C DAL81P21657 970 aa6.32□□□□□ -1.4
SHO1YER118C BUD2P33314 1104 aa6.32□□□□□ -1.4
SHO1YER118C TRM2P33753 639 aa6.32□□□□□ -1.4
SHO1YER118C STV1P37296 890 aa6.32□□□□□ -1.4
SHO1YER118C KAP104P38217 918 aaKnown RBP6.32□□□□□ -1.4
SHO1YER118C VHC1P38329 1120 aa6.32□□□□□ -1.4
SHO1YER118C TSC10P38342 320 aa6.32□□□□□ -1.4
SHO1YER118C TOS3P43637 560 aa6.32□□□□□ -1.4
SHO1YER118C JJJ3P47138 172 aa6.32□□□□□ -1.4
SHO1YER118C YMR187CQ03236 431 aa6.32□□□□□ -1.4
SHO1YER118C YMR310CQ04867 317 aaPredicted RBP6.32□□□□□ -1.4
SHO1YER118C RXT3Q07458 294 aa6.32□□□□□ -1.4
SHO1YER118C LPX1Q12405 387 aaKnown RBP6.32□□□□□ -1.4
SHO1YER118C APC2Q12440 853 aa6.32□□□□□ -1.4
SHO1YER118C LAM4P38800 1345 aa6.31□□□□□ -1.4
SHO1YER118C PMA1P05030 918 aaKnown RBP6.31□□□□□ -1.4
SHO1YER118C CHO2P05374 869 aaKnown RBP6.31□□□□□ -1.4
SHO1YER118C SGV1P23293 657 aaKnown RBP6.31□□□□□ -1.4
SHO1YER118C HXT2P23585 541 aa6.31□□□□□ -1.4
SHO1YER118C FUB1P25659 250 aa6.31□□□□□ -1.4
SHO1YER118C YUR1P26725 428 aa6.31□□□□□ -1.4
SHO1YER118C PAD1P33751 242 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
SHO1YER118C DUG2P38149 878 aa6.31□□□□□ -1.4
SHO1YER118C STN1P38960 494 aa6.31□□□□□ -1.4
SHO1YER118C ALP1P38971 573 aa6.31□□□□□ -1.4
SHO1YER118C ACO2P39533 789 aa6.31□□□□□ -1.4
SHO1YER118C UTP18P40362 594 aaPredicted RBP6.31□□□□□ -1.4
SHO1YER118C CDC40P40968 455 aaPredicted RBP6.31□□□□□ -1.4
SHO1YER118C LOH1P47055 219 aa6.31□□□□□ -1.4
SHO1YER118C AMA1P50082 593 aa6.31□□□□□ -1.4
SHO1YER118C YGR117CP53270 476 aa6.31□□□□□ -1.4
SHO1YER118C BUD17P53727 317 aa6.31□□□□□ -1.4
SHO1YER118C ERG5P54781 538 aa6.31□□□□□ -1.4
SHO1YER118C ROT1Q03691 256 aa6.31□□□□□ -1.4
SHO1YER118C MDM30Q05930 598 aa6.31□□□□□ -1.4
SHO1YER118C LCB4Q12246 624 aa6.31□□□□□ -1.4
SHO1YER118C CDC21P06785 304 aa6.3□□□□□ -1.4
SHO1YER118C COR1P07256 457 aa6.3□□□□□ -1.4
SHO1YER118C CDC6P09119 513 aa6.3□□□□□ -1.4
SHO1YER118C MAS1P10507 462 aa6.3□□□□□ -1.4
SHO1YER118C RVS161P25343 265 aaKnown RBP6.3□□□□□ -1.4
SHO1YER118C RHB1P25378 209 aa6.3□□□□□ -1.4
SHO1YER118C YCR016WP25617 290 aaKnown RBP6.3□□□□□ -1.4
SHO1YER118C SIN4P32259 974 aa6.3□□□□□ -1.4
SHO1YER118C YPS1P32329 569 aa6.3□□□□□ -1.4
SHO1YER118C RAD23P32628 398 aaKnown RBP6.3□□□□□ -1.4
SHO1YER118C FRE1P32791 686 aa6.3□□□□□ -1.4
SHO1YER118C SPP381P38282 291 aaPredicted RBP6.3□□□□□ -1.4
SHO1YER118C EFM2P38347 419 aa6.3□□□□□ -1.4
SHO1YER118C SPC97P38863 823 aa6.3□□□□□ -1.4
SHO1YER118C PLB1P39105 664 aa6.3□□□□□ -1.4
SHO1YER118C MBB1P39534 108 aa6.3□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms