RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	SPO23	P33757	523 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	RRN10	P38204	145 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	MET30	P39014	640 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	PLB1	P39105	664 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	RGI1	P40043	161 aa	Predicted RBP	6.98	□□□□□ -1.29
SKP1	YDR328C	VRG4	P40107	337 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	DIM1	P41819	318 aa	Known RBP	6.98	□□□□□ -1.29
SKP1	YDR328C	FMP32	P43557	207 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	GET1	P53192	235 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	EGD1	Q02642	157 aa	Known RBP	6.98	□□□□□ -1.29
SKP1	YDR328C	TY2A-DR2	Q03483	438 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	ROY1	Q04847	553 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	VPS74	Q06385	345 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	YOL131W	Q08270	108 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	YOL159C	Q08300	171 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	YOR114W	Q12219	294 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	TY2A-B	Q12260	438 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	TY2A-OR2	Q12293	438 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	TY2A-DR1	Q12392	438 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	TY2A-OR1	Q12439	438 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	TY2A-DR3	Q99303	438 aa		6.98	□□□□□ -1.29
SKP1	YDR328C	POL2	P21951	2222 aa	Known RBP	6.98	□□□□□ -1.29
SKP1	YDR328C	TYR1	P20049	452 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	SPT16	P32558	1035 aa	Known RBP	6.97	□□□□□ -1.29
SKP1	YDR328C	CDC13	P32797	924 aa	Known RBP	6.97	□□□□□ -1.29
SKP1	YDR328C	SFC1	P33303	322 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	VPS21	P36017	210 aa	Known RBP	6.97	□□□□□ -1.29
SKP1	YDR328C	ARA1	P38115	344 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	MED8	P38304	223 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	FAD1	P38913	306 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	CEM1	P39525	442 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	LRO1	P40345	661 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	6.97	□□□□□ -1.29	not detected
SKP1	YDR328C	YJL049W	P47048	450 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	UPF3	P48412	387 aa	Known RBP	6.97	□□□□□ -1.29
SKP1	YDR328C	MUP1	P50276	574 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	BIO3	P50277	480 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	ERP6	P53198	216 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	GOR1	P53839	350 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	YNL033W	P53964	284 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	YNL019C	P53975	284 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	ATP25	Q03153	612 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	MTQ2	Q03920	221 aa	Predicted RBP	6.97	□□□□□ -1.29
SKP1	YDR328C	HMO1	Q03973	246 aa	Known RBP	6.97	□□□□□ -1.29
SKP1	YDR328C	RAD33	Q04231	177 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	YML096W	Q04489	525 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	SWF1	Q04629	336 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	SPC2	Q04969	178 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	MLH3	Q12083	715 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	YPR022C	Q12139	1133 aa		6.97	□□□□□ -1.29
SKP1	YDR328C	RPN5	Q12250	445 aa	Known RBP	6.97	□□□□□ -1.29
SKP1	YDR328C	GAL7	P08431	366 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	MSS18	P08593	268 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	GCD2	P12754	651 aa	Predicted RBP	6.96	□□□□□ -1.3
SKP1	YDR328C	SYP1	P25623	870 aa	Known RBP	6.96	□□□□□ -1.3
SKP1	YDR328C	BUB3	P26449	341 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	DPH5	P32469	300 aa	Predicted RBP	6.96	□□□□□ -1.3
SKP1	YDR328C	CDC5	P32562	705 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	DOM34	P33309	386 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	MRP8	P35719	219 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	FMP46	P36141	133 aa	Known RBP	6.96	□□□□□ -1.3
SKP1	YDR328C	PDX3	P38075	228 aa	Known RBP	6.96	□□□□□ -1.3
SKP1	YDR328C	LYS1	P38998	373 aa	RIP-Chip data	6.96	□□□□□ -1.3	not detected
SKP1	YDR328C	DSS1	P39112	969 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	YPS6	P40583	537 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	MAD2	P40958	196 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	PSA1	P41940	361 aa	Known RBP	6.96	□□□□□ -1.3
SKP1	YDR328C	PRM10	P42946	383 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	NOP9	P47077	666 aa	Known RBP	6.96	□□□□□ -1.3
SKP1	YDR328C	COS6	P53344	381 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	NAN1	Q02931	896 aa	Known RBP	6.96	□□□□□ -1.3
SKP1	YDR328C	YMR010W	Q03687	405 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	HFD1	Q04458	532 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	SSQ1	Q05931	657 aa	Predicted RBP	6.96	□□□□□ -1.3
SKP1	YDR328C	GMC2	Q06201	188 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	GYP1	Q08484	637 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	DIN7	Q12086	430 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	GET4	Q12125	312 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	YOL107W	Q12239	342 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	NTO1	Q12311	748 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	RPN6	Q12377	434 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	SNF8	Q12483	233 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	ADF1	Q2V2Q1	113 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	Q0010	Q9ZZX9	128 aa		6.96	□□□□□ -1.3
SKP1	YDR328C	THP2	O13539	261 aa	Known RBP	6.95	□□□□□ -1.3
SKP1	YDR328C	ATP4	P05626	244 aa		6.95	□□□□□ -1.3
SKP1	YDR328C	RVS161	P25343	265 aa	Known RBP	6.95	□□□□□ -1.3
SKP1	YDR328C	SEC17	P32602	292 aa		6.95	□□□□□ -1.3
SKP1	YDR328C	PET127	P32606	800 aa		6.95	□□□□□ -1.3
SKP1	YDR328C	CAT2	P32796	670 aa	Known RBP	6.95	□□□□□ -1.3
SKP1	YDR328C	SKN1	P33336	771 aa		6.95	□□□□□ -1.3
SKP1	YDR328C	UTH1	P36135	365 aa		6.95	□□□□□ -1.3
SKP1	YDR328C	GLG1	P36143	616 aa		6.95	□□□□□ -1.3
SKP1	YDR328C	TDP1	P38319	544 aa		6.95	□□□□□ -1.3
SKP1	YDR328C	ERV46	P39727	415 aa		6.95	□□□□□ -1.3
SKP1	YDR328C	ECM10	P39987	644 aa		6.95	□□□□□ -1.3
SKP1	YDR328C	KEL2	P50090	882 aa		6.95	□□□□□ -1.3
SKP1	YDR328C	SDT1	P53078	280 aa		6.95	□□□□□ -1.3
SKP1	YDR328C	GPI1	P53306	609 aa		6.95	□□□□□ -1.3
SKP1	YDR328C	ARE2	P53629	642 aa	Known RBP	6.95	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms