RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM1	YDR120C	YDR131C	Q03899	556 aa		4.12	□□□□□ -1.75
TRM1	YDR120C	APL5	Q08951	932 aa	Known RBP	4.12	□□□□□ -1.75
TRM1	YDR120C	ARP6	Q12509	438 aa		4.12	□□□□□ -1.75
TRM1	YDR120C	ATO2	P32907	282 aa		4.12	□□□□□ -1.75
TRM1	YDR120C	BNA4	P38169	460 aa		4.12	□□□□□ -1.75
TRM1	YDR120C	MDG1	P53885	366 aa		4.12	□□□□□ -1.75
TRM1	YDR120C	YMR034C	Q05131	434 aa	Predicted RBP	4.12	□□□□□ -1.75
TRM1	YDR120C	VTA1	Q06263	330 aa		4.12	□□□□□ -1.75
TRM1	YDR120C	RGT2	Q12300	763 aa		4.12	□□□□□ -1.75
TRM1	YDR120C	ICL1	P28240	557 aa	Predicted RBP	4.11	□□□□□ -1.75
TRM1	YDR120C	HXT3	P32466	567 aa	Known RBP	4.11	□□□□□ -1.75
TRM1	YDR120C	MSN2	P33748	704 aa		4.11	□□□□□ -1.75
TRM1	YDR120C	DUG2	P38149	878 aa		4.11	□□□□□ -1.75
TRM1	YDR120C	YER130C	P39959	443 aa		4.11	□□□□□ -1.75
TRM1	YDR120C	DLD2	P46681	530 aa	Known RBP	4.11	□□□□□ -1.75
TRM1	YDR120C	ALT2	P52892	507 aa		4.11	□□□□□ -1.75
TRM1	YDR120C	SMA1	Q02651	245 aa		4.11	□□□□□ -1.75
TRM1	YDR120C	SUC2	P00724	532 aa		4.1	□□□□□ -1.75
TRM1	YDR120C	RPL3	P14126	387 aa	Known RBP	4.1	□□□□□ -1.75
TRM1	YDR120C	TYR1	P20049	452 aa		4.1	□□□□□ -1.75
TRM1	YDR120C	ADK2	P26364	225 aa		4.1	□□□□□ -1.75
TRM1	YDR120C	ARC40	P38328	384 aa	Known RBP	4.1	□□□□□ -1.75
TRM1	YDR120C	SHC1	P39000	512 aa		4.1	□□□□□ -1.75
TRM1	YDR120C	VMA13	P41807	478 aa	Known RBP	4.1	□□□□□ -1.75
TRM1	YDR120C	YFR016C	P43597	1233 aa	Known RBP	4.1	□□□□□ -1.75
TRM1	YDR120C	GUF1	P46943	645 aa		4.1	□□□□□ -1.75
TRM1	YDR120C	ZPR1	P53303	486 aa	Known RBP	4.1	□□□□□ -1.75
TRM1	YDR120C	AFT2	Q08957	416 aa		4.1	□□□□□ -1.75
TRM1	YDR120C	PDH1	Q12428	516 aa	Known RBP	4.1	□□□□□ -1.75
TRM1	YDR120C	ISN1	Q99312	450 aa		4.1	□□□□□ -1.75
TRM1	YDR120C	BAR1	P12630	587 aa		4.09	□□□□□ -1.75
TRM1	YDR120C	SPB1	P25582	841 aa	Predicted RBP	4.09	□□□□□ -1.75
TRM1	YDR120C	KEL1	P38853	1164 aa	Known RBP	4.09	□□□□□ -1.75
TRM1	YDR120C	YGL108C	P53139	140 aa		4.09	□□□□□ -1.75
TRM1	YDR120C	SAM50	P53969	484 aa		4.09	□□□□□ -1.75
TRM1	YDR120C	DIG1	Q03063	452 aa	Known RBP	4.09	□□□□□ -1.75
TRM1	YDR120C	ERO1	Q03103	563 aa		4.09	□□□□□ -1.75
TRM1	YDR120C	MSS11	Q03825	758 aa		4.09	□□□□□ -1.75
TRM1	YDR120C	ARX1	Q03862	593 aa	Known RBP	4.09	□□□□□ -1.75
TRM1	YDR120C	SNA4	Q07549	140 aa		4.09	□□□□□ -1.75
TRM1	YDR120C	THI20	Q08224	551 aa		4.09	□□□□□ -1.75
TRM1	YDR120C	BRR1	Q99177	341 aa	Predicted RBP	4.09	□□□□□ -1.75
TRM1	YDR120C	CLC1	P17891	233 aa		4.09	□□□□□ -1.76
TRM1	YDR120C	ACH1	P32316	526 aa		4.09	□□□□□ -1.76
TRM1	YDR120C	MIC60	P36112	540 aa		4.09	□□□□□ -1.76
TRM1	YDR120C	YMR147W	P40218	223 aa	Known RBP	4.09	□□□□□ -1.76
TRM1	YDR120C	SSU1	P41930	458 aa		4.09	□□□□□ -1.76
TRM1	YDR120C	YPL068C	Q02749	293 aa		4.09	□□□□□ -1.76
TRM1	YDR120C	GLO2	Q05584	274 aa		4.09	□□□□□ -1.76
TRM1	YDR120C	YLR352W	Q06479	807 aa		4.09	□□□□□ -1.76
TRM1	YDR120C	DIB1	Q06819	143 aa	Predicted RBP	4.09	□□□□□ -1.76
TRM1	YDR120C	FMP45	Q07651	309 aa		4.09	□□□□□ -1.76
TRM1	YDR120C	ALE1	Q08548	619 aa		4.09	□□□□□ -1.76
TRM1	YDR120C	YLR278C	Q05854	1341 aa		4.08	□□□□□ -1.76
TRM1	YDR120C	HNM1	P19807	563 aa		4.08	□□□□□ -1.76
TRM1	YDR120C	PPH22	P23595	377 aa		4.08	□□□□□ -1.76
TRM1	YDR120C	SNT1	P25357	1226 aa		4.08	□□□□□ -1.76
TRM1	YDR120C	YCR043C	P25361	127 aa		4.08	□□□□□ -1.76
TRM1	YDR120C	YCR051W	P25631	222 aa		4.08	□□□□□ -1.76
TRM1	YDR120C	RAD14	P28519	371 aa		4.08	□□□□□ -1.76
TRM1	YDR120C	DBF4	P32325	704 aa		4.08	□□□□□ -1.76
TRM1	YDR120C	VMA8	P32610	256 aa	Known RBP	4.08	□□□□□ -1.76
TRM1	YDR120C	RAD24	P32641	659 aa		4.08	□□□□□ -1.76
TRM1	YDR120C	STB6	P36085	766 aa		4.08	□□□□□ -1.76
TRM1	YDR120C	YGL082W	P53155	381 aa		4.08	□□□□□ -1.76
TRM1	YDR120C	MNP1	P53163	194 aa	Predicted RBP	4.08	□□□□□ -1.76
TRM1	YDR120C	SRL1	Q08673	210 aa		4.08	□□□□□ -1.76
TRM1	YDR120C	APE1	P14904	514 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	REC107	P21651	314 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	ERG1	P32476	496 aa	Known RBP	4.07	□□□□□ -1.76
TRM1	YDR120C	HCS1	P34243	683 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	ECM15	P35195	104 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	GCS1	P35197	352 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	TUL1	P36096	758 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	YJL068C	P40363	299 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	YIR014W	P40570	242 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	TES1	P41903	349 aa	Known RBP	4.07	□□□□□ -1.76
TRM1	YDR120C	YGR149W	P48236	432 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	TDA7	P53882	636 aa	Predicted RBP	4.07	□□□□□ -1.76
TRM1	YDR120C	BNI5	P53890	448 aa	Known RBP	4.07	□□□□□ -1.76
TRM1	YDR120C	YDR415C	Q04033	374 aa	Predicted RBP	4.07	□□□□□ -1.76
TRM1	YDR120C	YLR281C	Q05863	155 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	YLR345W	Q06137	509 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	YCR007C	P25354	239 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	AFG1	P32317	509 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	ATP11	P32453	318 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	RPN2	P32565	945 aa	Known RBP	4.07	□□□□□ -1.76
TRM1	YDR120C	RML2	P32611	393 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	UTR4	P32626	227 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	VPS17	P32913	551 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	OSH3	P38713	996 aa	Known RBP	4.07	□□□□□ -1.76
TRM1	YDR120C	MET30	P39014	640 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	YIL169C	P40442	995 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	CSM2	P40465	213 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	AZF1	P41696	914 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	SLD5	Q03406	294 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	YMR087W	Q04299	284 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	ERB1	Q04660	807 aa	Known RBP	4.07	□□□□□ -1.76
TRM1	YDR120C	ROY1	Q04847	553 aa		4.07	□□□□□ -1.76
TRM1	YDR120C	MES1	P00958	751 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms