RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W GIM4P40005 111 aaKnown RBP5.4□□□□□ -1.55
FOB1YDR110W YIR007WP40566 764 aa5.4□□□□□ -1.55
FOB1YDR110W CDC40P40968 455 aaPredicted RBP5.4□□□□□ -1.55
FOB1YDR110W CIN1P40987 1014 aa5.4□□□□□ -1.55
FOB1YDR110W HXT14P42833 540 aa5.4□□□□□ -1.55
FOB1YDR110W YJR056CP47115 236 aa5.4□□□□□ -1.55
FOB1YDR110W TAM41P53230 385 aa5.4□□□□□ -1.55
FOB1YDR110W CAB5Q03941 241 aa5.4□□□□□ -1.55
FOB1YDR110W RKM2Q03942 479 aa5.4□□□□□ -1.55
FOB1YDR110W COX20Q04935 205 aa5.4□□□□□ -1.55
FOB1YDR110W STP3Q05937 343 aa5.4□□□□□ -1.55
FOB1YDR110W GEP3Q08622 556 aa5.4□□□□□ -1.55
FOB1YDR110W ACF2Q12168 779 aa5.4□□□□□ -1.55
FOB1YDR110W SLP1Q12232 587 aa5.4□□□□□ -1.55
FOB1YDR110W MDM20Q12387 796 aaKnown RBP5.4□□□□□ -1.55
FOB1YDR110W LSO2Q3E772 92 aaKnown RBP5.4□□□□□ -1.55
FOB1YDR110W TY1B-NL2Q99337 1749 aaKnown RBP5.39□□□□□ -1.55
FOB1YDR110W LEU4P06208 619 aaKnown RBP5.39□□□□□ -1.55
FOB1YDR110W GPH1P06738 902 aaKnown RBP5.39□□□□□ -1.55
FOB1YDR110W HTS1P07263 546 aaKnown RBP5.39□□□□□ -1.55
FOB1YDR110W NHP6BP11633 99 aaKnown RBP5.39□□□□□ -1.55
FOB1YDR110W FUS1P11710 512 aa5.39□□□□□ -1.55
FOB1YDR110W MET16P18408 261 aaPredicted RBP5.39□□□□□ -1.55
FOB1YDR110W RPS5P26783 225 aaKnown RBP5.39□□□□□ -1.55
FOB1YDR110W PRO1P32264 428 aa5.39□□□□□ -1.55
FOB1YDR110W KES1P35844 434 aaKnown RBP5.39□□□□□ -1.55
FOB1YDR110W FLR1P38124 548 aa5.39□□□□□ -1.55
FOB1YDR110W TDP1P38319 544 aa5.39□□□□□ -1.55
FOB1YDR110W NUP60P39705 539 aa5.39□□□□□ -1.55
FOB1YDR110W SHR5P41912 237 aa5.39□□□□□ -1.55
FOB1YDR110W YJL107CP42947 387 aa5.39□□□□□ -1.55
FOB1YDR110W YHC3P47040 408 aa5.39□□□□□ -1.55
FOB1YDR110W COX16P47081 118 aa5.39□□□□□ -1.55
FOB1YDR110W YIP5P53108 310 aa5.39□□□□□ -1.55
FOB1YDR110W COP1P53622 1201 aaKnown RBP5.39□□□□□ -1.55
FOB1YDR110W ATG21Q02887 496 aa5.39□□□□□ -1.55
FOB1YDR110W INA17Q02888 182 aa5.39□□□□□ -1.55
FOB1YDR110W PRM15Q03262 622 aa5.39□□□□□ -1.55
FOB1YDR110W YLR283WQ05867 314 aa5.39□□□□□ -1.55
FOB1YDR110W YPR147CQ06522 304 aaKnown RBP5.39□□□□□ -1.55
FOB1YDR110W BTS1Q12051 335 aa5.39□□□□□ -1.55
FOB1YDR110W YOR029WQ12243 111 aa5.39□□□□□ -1.55
FOB1YDR110W BMT6Q12291 365 aa5.39□□□□□ -1.55
FOB1YDR110W NOT5Q12514 560 aaPredicted RBP5.39□□□□□ -1.55
FOB1YDR110W RPL24AP04449 155 aaKnown RBP5.38□□□□□ -1.55
FOB1YDR110W RHO1P06780 209 aaKnown RBP5.38□□□□□ -1.55
FOB1YDR110W SEC12P11655 471 aa5.38□□□□□ -1.55
FOB1YDR110W IMG1P25626 169 aa5.38□□□□□ -1.55
FOB1YDR110W IDH2P28241 369 aaKnown RBP5.38□□□□□ -1.55
FOB1YDR110W SPS19P32573 292 aaKnown RBP5.38□□□□□ -1.55
FOB1YDR110W RAD23P32628 398 aaKnown RBP5.38□□□□□ -1.55
FOB1YDR110W SLA2P33338 968 aa5.38□□□□□ -1.55
FOB1YDR110W SEC66P33754 206 aa5.38□□□□□ -1.55
FOB1YDR110W WBP1P33767 430 aaKnown RBP5.38□□□□□ -1.55
FOB1YDR110W ERG7P38604 731 aa5.38□□□□□ -1.55
FOB1YDR110W FRT2P39734 528 aa5.38□□□□□ -1.55
FOB1YDR110W PZF1P39933 429 aa5.38□□□□□ -1.55
FOB1YDR110W YER121WP40076 114 aa5.38□□□□□ -1.55
FOB1YDR110W ZAP1P47043 880 aa5.38□□□□□ -1.55
FOB1YDR110W YGL159WP53110 370 aa5.38□□□□□ -1.55
FOB1YDR110W YNR040WP53736 256 aa5.38□□□□□ -1.55
FOB1YDR110W DUS1P53759 423 aaKnown RBP5.38□□□□□ -1.55
FOB1YDR110W ADE16P54113 591 aaKnown RBP5.38□□□□□ -1.55
FOB1YDR110W ORC3P54790 616 aa5.38□□□□□ -1.55
FOB1YDR110W AIM33Q04516 312 aa5.38□□□□□ -1.55
FOB1YDR110W ADY4Q05955 493 aa5.38□□□□□ -1.55
FOB1YDR110W VTA1Q06263 330 aa5.38□□□□□ -1.55
FOB1YDR110W THI3Q07471 609 aa5.38□□□□□ -1.55
FOB1YDR110W DDC1Q08949 612 aa5.38□□□□□ -1.55
FOB1YDR110W WSC3Q12215 556 aa5.38□□□□□ -1.55
FOB1YDR110W YDR262WQ12331 272 aa5.38□□□□□ -1.55
FOB1YDR110W PNS1Q12412 539 aa5.38□□□□□ -1.55
FOB1YDR110W DCP1Q12517 231 aaPredicted RBP5.38□□□□□ -1.55
FOB1YDR110W RNR2P09938 399 aaKnown RBP5.37□□□□□ -1.55
FOB1YDR110W CBF1P17106 351 aa5.37□□□□□ -1.55
FOB1YDR110W SNF6P18888 332 aa5.37□□□□□ -1.55
FOB1YDR110W PRE10P21242 288 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
FOB1YDR110W VPS34P22543 875 aa5.37□□□□□ -1.55
FOB1YDR110W NAM9P27929 486 aa5.37□□□□□ -1.55
FOB1YDR110W PPA2P28239 310 aa5.37□□□□□ -1.55
FOB1YDR110W MTC7P32633 139 aa5.37□□□□□ -1.55
FOB1YDR110W DOA1P36037 715 aa5.37□□□□□ -1.55
FOB1YDR110W PTC4P38089 393 aa5.37□□□□□ -1.55
FOB1YDR110W POA1P38218 177 aa5.37□□□□□ -1.55
FOB1YDR110W AME1P38313 324 aa5.37□□□□□ -1.55
FOB1YDR110W URA8P38627 578 aaPredicted RBP5.37□□□□□ -1.55
FOB1YDR110W VMA22P38784 181 aa5.37□□□□□ -1.55
FOB1YDR110W AIM22P47051 409 aa5.37□□□□□ -1.55
FOB1YDR110W YGR149WP48236 432 aa5.37□□□□□ -1.55
FOB1YDR110W YGL036WP53185 909 aaPredicted RBP5.37□□□□□ -1.55
FOB1YDR110W PEF1P53238 335 aa5.37□□□□□ -1.55
FOB1YDR110W COG2P53271 262 aa5.37□□□□□ -1.55
FOB1YDR110W RCR2Q03446 210 aaKnown RBP5.37□□□□□ -1.55
FOB1YDR110W APC4Q04601 652 aa5.37□□□□□ -1.55
FOB1YDR110W CDC123Q05791 360 aa5.37□□□□□ -1.55
FOB1YDR110W YOL075CQ08234 1294 aa5.37□□□□□ -1.55
FOB1YDR110W RAX1Q08760 435 aa5.37□□□□□ -1.55
FOB1YDR110W NUS1Q12063 375 aa5.37□□□□□ -1.55
FOB1YDR110W HIS4P00815 799 aaKnown RBP5.37□□□□□ -1.55
FOB1YDR110W PMA1P05030 918 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms