RNA–Protein interactions for RNA: YDR048C

YDR048C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR048C, Length 315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR048CYDR048C YHR214WP0CX19 203 aa1.49□□□□□ -2.17
YDR048CYDR048C SAM1P10659 382 aaKnown RBP1.49□□□□□ -2.17
YDR048CYDR048C SAM2P19358 384 aaKnown RBP1.49□□□□□ -2.17
YDR048CYDR048C YKL097CP34245 136 aa1.49□□□□□ -2.17
YDR048CYDR048C RIB5P38145 238 aa1.49□□□□□ -2.17
YDR048CYDR048C MBB1P39534 108 aa1.49□□□□□ -2.17
YDR048CYDR048C ISC1P40015 477 aaKnown RBP1.49□□□□□ -2.17
YDR048CYDR048C YMR147WP40218 223 aaKnown RBP1.49□□□□□ -2.17
YDR048CYDR048C ALG5P40350 334 aa1.49□□□□□ -2.17
YDR048CYDR048C UTP18P40362 594 aaPredicted RBP1.49□□□□□ -2.17
YDR048CYDR048C DPH1P40487 425 aaKnown RBP1.49□□□□□ -2.17
YDR048CYDR048C YJR085CP47131 105 aaKnown RBP1.49□□□□□ -2.17
YDR048CYDR048C IPI3P53877 555 aa1.49□□□□□ -2.17
YDR048CYDR048C FIN1Q03898 291 aa1.49□□□□□ -2.17
YDR048CYDR048C MRD1Q06106 887 aaKnown RBP1.49□□□□□ -2.17
YDR048CYDR048C IRC25Q07951 179 aa1.49□□□□□ -2.17
YDR048CYDR048C LEU4P06208 619 aaKnown RBP1.48□□□□□ -2.17
YDR048CYDR048C YCK1P23291 538 aa1.48□□□□□ -2.17
YDR048CYDR048C PRD1P25375 712 aa1.48□□□□□ -2.17
YDR048CYDR048C POL4P25615 582 aa1.48□□□□□ -2.17
YDR048CYDR048C KAR9P32526 644 aa1.48□□□□□ -2.17
YDR048CYDR048C SEF1P34228 1148 aa1.48□□□□□ -2.17
YDR048CYDR048C YBR137WP38276 179 aa1.48□□□□□ -2.17
YDR048CYDR048C KEL1P38853 1164 aaKnown RBP1.48□□□□□ -2.17
YDR048CYDR048C SSU1P41930 458 aa1.48□□□□□ -2.17
YDR048CYDR048C VID30P53076 958 aa1.48□□□□□ -2.17
YDR048CYDR048C PDS5Q04264 1277 aa1.48□□□□□ -2.17
YDR048CYDR048C RPC11Q04307 110 aaPredicted RBP1.48□□□□□ -2.17
YDR048CYDR048C SOV1Q04748 898 aa1.48□□□□□ -2.17
YDR048CYDR048C YEH1Q07804 573 aa1.48□□□□□ -2.17
YDR048CYDR048C MUM3Q08750 479 aa1.48□□□□□ -2.17
YDR048CYDR048C TRP1P00912 224 aa1.47□□□□□ -2.17
YDR048CYDR048C TIP1P27654 210 aaPredicted RBP1.47□□□□□ -2.17
YDR048CYDR048C CHS3P29465 1165 aa1.47□□□□□ -2.17
YDR048CYDR048C TCD2P36101 447 aaKnown RBP1.47□□□□□ -2.17
YDR048CYDR048C VID24P38263 362 aa1.47□□□□□ -2.17
YDR048CYDR048C IMD4P50094 524 aaKnown RBP1.47□□□□□ -2.17
YDR048CYDR048C LCL3P53153 274 aa1.47□□□□□ -2.17
YDR048CYDR048C YMR181CQ03231 154 aa1.47□□□□□ -2.17
YDR048CYDR048C VHS1Q03785 461 aa1.47□□□□□ -2.17
YDR048CYDR048C YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
YDR048CYDR048C SSP2Q08646 371 aa1.47□□□□□ -2.17
YDR048CYDR048C PLP2Q12017 286 aa1.47□□□□□ -2.17
YDR048CYDR048C RRD2Q12461 358 aa1.47□□□□□ -2.17
YDR048CYDR048C NOP58Q12499 511 aaKnown RBP1.47□□□□□ -2.17
YDR048CYDR048C YPT6Q99260 215 aa1.47□□□□□ -2.17
YDR048CYDR048C RAV1P47104 1357 aa1.47□□□□□ -2.17
YDR048CYDR048C POP5P28005 173 aa1.46□□□□□ -2.18
YDR048CYDR048C MRS6P32864 603 aaKnown RBP1.46□□□□□ -2.18
YDR048CYDR048C MRPL10P36520 322 aa1.46□□□□□ -2.18
YDR048CYDR048C YBL029WP38201 376 aa1.46□□□□□ -2.18
YDR048CYDR048C SEO1P39709 593 aa1.46□□□□□ -2.18
YDR048CYDR048C AFG3P39925 761 aa1.46□□□□□ -2.18
YDR048CYDR048C CHS6P40955 746 aa1.46□□□□□ -2.18
YDR048CYDR048C POP1P41812 875 aa1.46□□□□□ -2.18
YDR048CYDR048C LAM5P43560 674 aa1.46□□□□□ -2.18
YDR048CYDR048C PPM1Q04081 328 aa1.46□□□□□ -2.18
YDR048CYDR048C VPS38Q05919 439 aa1.46□□□□□ -2.18
YDR048CYDR048C NMD4Q12129 218 aa1.46□□□□□ -2.18
YDR048CYDR048C PKH2Q12236 1081 aaKnown RBP1.46□□□□□ -2.18
YDR048CYDR048C FAB1P34756 2278 aa1.46□□□□□ -2.18
YDR048CYDR048C CYC3P06182 269 aa1.45□□□□□ -2.18
YDR048CYDR048C EST1P17214 699 aaPredicted RBP1.45□□□□□ -2.18
YDR048CYDR048C ITR1P30605 584 aa1.45□□□□□ -2.18
YDR048CYDR048C NPL6P32832 435 aa1.45□□□□□ -2.18
YDR048CYDR048C YCR041WP37265 110 aa1.45□□□□□ -2.18
YDR048CYDR048C CHK1P38147 527 aa1.45□□□□□ -2.18
YDR048CYDR048C FLC2P39719 783 aa1.45□□□□□ -2.18
YDR048CYDR048C YIP1P53039 248 aa1.45□□□□□ -2.18
YDR048CYDR048C NGL3Q03210 505 aa1.45□□□□□ -2.18
YDR048CYDR048C TIM18Q08749 192 aa1.45□□□□□ -2.18
YDR048CYDR048C YPQ1Q12010 308 aa1.45□□□□□ -2.18
YDR048CYDR048C RLM1Q12224 676 aa1.45□□□□□ -2.18
YDR048CYDR048C YBR126W-AQ8TGU7 68 aa1.45□□□□□ -2.18
YDR048CYDR048C GYP6P32806 458 aa1.44□□□□□ -2.18
YDR048CYDR048C WBP1P33767 430 aaKnown RBP1.44□□□□□ -2.18
YDR048CYDR048C CBP4P37267 147 aa1.44□□□□□ -2.18
YDR048CYDR048C AIM10P39965 576 aaKnown RBP1.44□□□□□ -2.18
YDR048CYDR048C OCA1P50946 238 aaPredicted RBP1.44□□□□□ -2.18
YDR048CYDR048C PCP1P53259 346 aa1.44□□□□□ -2.18
YDR048CYDR048C ECM11Q04110 302 aa1.44□□□□□ -2.18
YDR048CYDR048C YJR112W-AQ3E743 109 aa1.44□□□□□ -2.18
YDR048CYDR048C PEP3P27801 918 aa1.43□□□□□ -2.18
YDR048CYDR048C ARA1P38115 344 aa1.43□□□□□ -2.18
YDR048CYDR048C MRPS9P38120 278 aa1.43□□□□□ -2.18
YDR048CYDR048C YHR131CP38835 850 aa1.43□□□□□ -2.18
YDR048CYDR048C DUO1P53168 247 aaKnown RBP1.43□□□□□ -2.18
YDR048CYDR048C YDR239CQ03780 787 aa1.43□□□□□ -2.18
YDR048CYDR048C YPS3Q12303 508 aa1.43□□□□□ -2.18
YDR048CYDR048C AVL9Q12500 764 aa1.43□□□□□ -2.18
YDR048CYDR048C RPL31BP0C2H9 113 aaKnown RBP1.42□□□□□ -2.18
YDR048CYDR048C MUD1P32605 298 aaKnown RBP1.42□□□□□ -2.18
YDR048CYDR048C MRE11P32829 692 aa1.42□□□□□ -2.18
YDR048CYDR048C CSE2P33308 149 aa1.42□□□□□ -2.18
YDR048CYDR048C DFG10P40526 253 aa1.42□□□□□ -2.18
YDR048CYDR048C SGN1P40561 250 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
YDR048CYDR048C YNR048WP53740 393 aa1.42□□□□□ -2.18
YDR048CYDR048C NCS2P53923 493 aaPredicted RBP1.42□□□□□ -2.18
YDR048CYDR048C YML131WQ03102 365 aa1.42□□□□□ -2.18
YDR048CYDR048C AIM32Q04689 311 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 78.2 ms