RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN6	YDL097C	BLS1	Q06071	122 aa		4.09	□□□□□ -1.75
RPN6	YDL097C	FAP7	Q12055	197 aa	Predicted RBP	4.09	□□□□□ -1.75
RPN6	YDL097C	FLO9	P39712	1322 aa		4.08	□□□□□ -1.76
RPN6	YDL097C	ARG4	P04076	463 aa	Predicted RBP	4.08	□□□□□ -1.76
RPN6	YDL097C	RPL15A	P05748	204 aa	Known RBP	4.08	□□□□□ -1.76
RPN6	YDL097C	CDC36	P06100	191 aa	Predicted RBP	4.08	□□□□□ -1.76
RPN6	YDL097C	RNR2	P09938	399 aa	Known RBP	4.08	□□□□□ -1.76
RPN6	YDL097C	SFL1	P20134	766 aa		4.08	□□□□□ -1.76
RPN6	YDL097C	NPP1	P25353	742 aa		4.08	□□□□□ -1.76
RPN6	YDL097C	DCG1	P32460	244 aa		4.08	□□□□□ -1.76
RPN6	YDL097C	IMP3	P32899	183 aa	Predicted RBP	4.08	□□□□□ -1.76
RPN6	YDL097C	REC104	P33323	182 aa		4.08	□□□□□ -1.76
RPN6	YDL097C	STB6	P36085	766 aa		4.08	□□□□□ -1.76
RPN6	YDL097C	TRZ1	P36159	838 aa	Predicted RBP	4.08	□□□□□ -1.76
RPN6	YDL097C	LDB7	P38210	180 aa		4.08	□□□□□ -1.76
RPN6	YDL097C	BZZ1	P38822	633 aa		4.08	□□□□□ -1.76
RPN6	YDL097C	RAD17	P48581	401 aa		4.08	□□□□□ -1.76
RPN6	YDL097C	GPG1	P53130	126 aa		4.08	□□□□□ -1.76
RPN6	YDL097C	ESBP6	P53918	673 aa		4.08	□□□□□ -1.76
RPN6	YDL097C	MPS1	P54199	764 aa		4.08	□□□□□ -1.76
RPN6	YDL097C	RPL15B	P54780	204 aa	Predicted RBP	4.08	□□□□□ -1.76
RPN6	YDL097C	TAF12	Q03761	539 aa		4.08	□□□□□ -1.76
RPN6	YDL097C	AAD15	Q08361	143 aa		4.08	□□□□□ -1.76
RPN6	YDL097C	RPS8A	P0CX39	200 aa	Known RBP	4.07	□□□□□ -1.76
RPN6	YDL097C	RPS8B	P0CX40	200 aa	Known RBP	4.07	□□□□□ -1.76
RPN6	YDL097C	MSS116	P15424	664 aa	Known RBP	4.07	□□□□□ -1.76
RPN6	YDL097C	YCK1	P23291	538 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	RPB9	P27999	122 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	IME2	P32581	645 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	BAP2	P38084	609 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	YBR062C	P38239	180 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	YBP1	P38315	674 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	ERP2	P39704	215 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	TMN3	P40071	706 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	YER188W	P40103	239 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	YIL012W	P40551	113 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	SNO3	P43544	222 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	YJR120W	P47157	116 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	PEX8	P53248	589 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	TNA1	P53322	534 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	NCE103	P53615	221 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	EFM6	P53970	246 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	NUP100	Q02629	959 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	ADH6	Q04894	360 aa	Known RBP	4.07	□□□□□ -1.76
RPN6	YDL097C	RSC3	Q06639	885 aa		4.07	□□□□□ -1.76
RPN6	YDL097C	PRB1	P09232	635 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	MET8	P15807	274 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	TRX1	P22217	103 aa	Known RBP	4.06	□□□□□ -1.76
RPN6	YDL097C	RPI1	P23250	407 aa	Known RBP	4.06	□□□□□ -1.76
RPN6	YDL097C	YSC84	P32793	468 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	YKL187C	P34231	750 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	MTC2	P34246	357 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	PRS3	P38689	320 aa	Known RBP	4.06	□□□□□ -1.76
RPN6	YDL097C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
RPN6	YDL097C	PRE6	P40303	254 aa	Known RBP	4.06	□□□□□ -1.76
RPN6	YDL097C	ALG8	P40351	577 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	YFL054C	P43549	646 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	IRC6	P43615	237 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	DAM1	P53267	343 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	GND2	P53319	492 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	YMR210W	Q03649	449 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	HFD1	Q04458	532 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	TDA9	Q04545	1251 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	YMR034C	Q05131	434 aa	Predicted RBP	4.06	□□□□□ -1.76
RPN6	YDL097C	PML1	Q07930	204 aa	Predicted RBP	4.06	□□□□□ -1.76
RPN6	YDL097C	YLR040C	Q07988	224 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	YDR056C	Q12025	205 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	ATG9	Q12142	997 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	YOR012W	Q12351	137 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	Q0144	Q9ZZW2	109 aa		4.06	□□□□□ -1.76
RPN6	YDL097C	QCR6	P00127	147 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	GCD1	P09032	578 aa	Predicted RBP	4.05	□□□□□ -1.76
RPN6	YDL097C	PCT1	P13259	424 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	ERG8	P24521	451 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	CLB1	P24868	471 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	PCL2	P25693	308 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	YMC1	P32331	307 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	STO1	P34160	861 aa	Known RBP	4.05	□□□□□ -1.76
RPN6	YDL097C	YKR078W	P36158	585 aa	Known RBP	4.05	□□□□□ -1.76
RPN6	YDL097C	PCH2	P38126	564 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	MTC4	P38335	694 aa	Known RBP	4.05	□□□□□ -1.76
RPN6	YDL097C	UTP18	P40362	594 aa	Predicted RBP	4.05	□□□□□ -1.76
RPN6	YDL097C	ICE2	P40499	491 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	MNN5	P46982	586 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	ECL1	P48235	211 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	RFX1	P48743	811 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	NIT3	P49954	291 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	BIO3	P50277	480 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	YNL247W	P53852	767 aa	Known RBP	4.05	□□□□□ -1.76
RPN6	YDL097C	SUB1	P54000	292 aa	Known RBP	4.05	□□□□□ -1.76
RPN6	YDL097C	AAT1	Q01802	451 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	SKI8	Q02793	397 aa	Predicted RBP	4.05	□□□□□ -1.76
RPN6	YDL097C	ATP25	Q03153	612 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	XYL2	Q07993	356 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	MMT2	Q08970	484 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	ENV7	Q12003	364 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	REX3	Q12090	404 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	YPR022C	Q12139	1133 aa		4.05	□□□□□ -1.76
RPN6	YDL097C	TMA7	Q3E764	64 aa	Known RBP	4.05	□□□□□ -1.76
RPN6	YDL097C	DFG16	Q99234	619 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms