RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeast

Gene PTC1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC1	YDL006W	CDC37	P06101	506 aa	Known RBP	4.56	□□□□□ -1.68
PTC1	YDL006W	OM45	P16547	393 aa		4.56	□□□□□ -1.68
PTC1	YDL006W	KGD1	P20967	1014 aa	Known RBP	4.56	□□□□□ -1.68
PTC1	YDL006W	UBP11	P36026	717 aa		4.56	□□□□□ -1.68
PTC1	YDL006W	EBP2	P36049	427 aa	Known RBP	4.56	□□□□□ -1.68
PTC1	YDL006W	ANS1	P38832	159 aa		4.56	□□□□□ -1.68
PTC1	YDL006W	CIN4	P39110	191 aa		4.56	□□□□□ -1.68
PTC1	YDL006W	ALG5	P40350	334 aa		4.56	□□□□□ -1.68
PTC1	YDL006W	FIS1	P40515	155 aa		4.56	□□□□□ -1.68
PTC1	YDL006W	YIR016W	P40572	265 aa		4.56	□□□□□ -1.68
PTC1	YDL006W	MET28	P40573	187 aa		4.56	□□□□□ -1.68
PTC1	YDL006W	RPS10B	P46784	105 aa	Known RBP	4.56	□□□□□ -1.68
PTC1	YDL006W	YGL039W	P53183	348 aa	Known RBP	4.56	□□□□□ -1.68
PTC1	YDL006W	SCW4	P53334	386 aa	Known RBP	4.56	□□□□□ -1.68
PTC1	YDL006W	SEC5	P89102	971 aa		4.56	□□□□□ -1.68
PTC1	YDL006W	ECM30	Q06673	1274 aa		4.56	□□□□□ -1.68
PTC1	YDL006W	SMC5	Q08204	1093 aa		4.56	□□□□□ -1.68
PTC1	YDL006W	RPS10A	Q08745	105 aa	Predicted RBP	4.56	□□□□□ -1.68
PTC1	YDL006W	YLR112W	Q12130	139 aa		4.56	□□□□□ -1.68
PTC1	YDL006W	ARG3	P05150	338 aa		4.55	□□□□□ -1.68
PTC1	YDL006W	TCP1	P12612	559 aa	Known RBP	4.55	□□□□□ -1.68
PTC1	YDL006W	ART10	P18634	518 aa	Known RBP	4.55	□□□□□ -1.68
PTC1	YDL006W	ISY1	P21374	235 aa	Predicted RBP	4.55	□□□□□ -1.68
PTC1	YDL006W	TIF3	P34167	436 aa	Known RBP	4.55	□□□□□ -1.68
PTC1	YDL006W	TVP38	P36164	337 aa		4.55	□□□□□ -1.68
PTC1	YDL006W	YPK3	P38070	525 aa		4.55	□□□□□ -1.68
PTC1	YDL006W	SRO77	P38163	1010 aa		4.55	□□□□□ -1.68
PTC1	YDL006W	YIL060W	P40519	144 aa		4.55	□□□□□ -1.68
PTC1	YDL006W	ROK1	P45818	564 aa	Predicted RBP	4.55	□□□□□ -1.68
PTC1	YDL006W	HOS2	P53096	452 aa	Predicted RBP	4.55	□□□□□ -1.68
PTC1	YDL006W	MRPL19	P53875	158 aa		4.55	□□□□□ -1.68
PTC1	YDL006W	NCS2	P53923	493 aa	Predicted RBP	4.55	□□□□□ -1.68
PTC1	YDL006W	IZH1	Q03419	316 aa		4.55	□□□□□ -1.68
PTC1	YDL006W	YLR281C	Q05863	155 aa		4.55	□□□□□ -1.68
PTC1	YDL006W	VPS38	Q05919	439 aa		4.55	□□□□□ -1.68
PTC1	YDL006W	YDL218W	Q07629	317 aa		4.55	□□□□□ -1.68
PTC1	YDL006W	MLH2	Q07980	695 aa		4.55	□□□□□ -1.68
PTC1	YDL006W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
PTC1	YDL006W	RPC53	P25441	422 aa		4.54	□□□□□ -1.68
PTC1	YDL006W	GID7	P25569	745 aa		4.54	□□□□□ -1.68
PTC1	YDL006W	PSO2	P30620	661 aa		4.54	□□□□□ -1.68
PTC1	YDL006W	MTR2	P34232	184 aa	Known RBP	4.54	□□□□□ -1.68
PTC1	YDL006W	TCD2	P36101	447 aa	Known RBP	4.54	□□□□□ -1.68
PTC1	YDL006W	DBP7	P36120	742 aa	Known RBP	4.54	□□□□□ -1.68
PTC1	YDL006W	RPL32	P38061	130 aa	Known RBP	4.54	□□□□□ -1.68
PTC1	YDL006W	GND1	P38720	489 aa	Known RBP	4.54	□□□□□ -1.68
PTC1	YDL006W	SPT8	P38915	602 aa		4.54	□□□□□ -1.68
PTC1	YDL006W	YIL152W	P40455	235 aa		4.54	□□□□□ -1.68
PTC1	YDL006W	FYV8	P46949	817 aa	Known RBP	4.54	□□□□□ -1.68
PTC1	YDL006W	TOF1	P53840	1238 aa		4.54	□□□□□ -1.68
PTC1	YDL006W	YNL234W	P53857	426 aa		4.54	□□□□□ -1.68
PTC1	YDL006W	RSM23	Q01163	450 aa		4.54	□□□□□ -1.68
PTC1	YDL006W	MSC1	Q03104	513 aa		4.54	□□□□□ -1.68
PTC1	YDL006W	TAF11	Q04226	346 aa		4.54	□□□□□ -1.68
PTC1	YDL006W	RSF1	Q05043	376 aa		4.54	□□□□□ -1.68
PTC1	YDL006W	RGT2	Q12300	763 aa		4.54	□□□□□ -1.68
PTC1	YDL006W	SCM3	Q12334	223 aa		4.54	□□□□□ -1.68
PTC1	YDL006W	CKA1	P15790	372 aa		4.53	□□□□□ -1.68
PTC1	YDL006W	EST1	P17214	699 aa	Predicted RBP	4.53	□□□□□ -1.68
PTC1	YDL006W	YUR1	P26725	428 aa		4.53	□□□□□ -1.68
PTC1	YDL006W	SNC1	P31109	117 aa		4.53	□□□□□ -1.68
PTC1	YDL006W	MRE11	P32829	692 aa		4.53	□□□□□ -1.68
PTC1	YDL006W	NPL6	P32832	435 aa		4.53	□□□□□ -1.68
PTC1	YDL006W	ATO2	P32907	282 aa		4.53	□□□□□ -1.68
PTC1	YDL006W	WBP1	P33767	430 aa	Known RBP	4.53	□□□□□ -1.68
PTC1	YDL006W	YET1	P35723	206 aa		4.53	□□□□□ -1.68
PTC1	YDL006W	MUM2	P38236	366 aa		4.53	□□□□□ -1.68
PTC1	YDL006W	RTS2	P40962	232 aa		4.53	□□□□□ -1.68
PTC1	YDL006W	TOS3	P43637	560 aa		4.53	□□□□□ -1.68
PTC1	YDL006W	IMD4	P50094	524 aa	Known RBP	4.53	□□□□□ -1.68
PTC1	YDL006W	PKP2	P53170	491 aa		4.53	□□□□□ -1.68
PTC1	YDL006W	EBS1	Q03466	884 aa	Known RBP	4.53	□□□□□ -1.68
PTC1	YDL006W	YMR160W	Q03823	816 aa		4.53	□□□□□ -1.68
PTC1	YDL006W	YMR321C	Q04898	105 aa		4.53	□□□□□ -1.68
PTC1	YDL006W	GEP3	Q08622	556 aa		4.53	□□□□□ -1.68
PTC1	YDL006W	RDR1	Q08904	546 aa		4.53	□□□□□ -1.68
PTC1	YDL006W	MRP13	P12686	339 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	POX1	P13711	748 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	PDA1	P16387	420 aa	Known RBP	4.52	□□□□□ -1.69
PTC1	YDL006W	COT1	P32798	439 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	MPE1	P35728	441 aa	Known RBP	4.52	□□□□□ -1.69
PTC1	YDL006W	LAG1	P38703	411 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	CTM1	P38818	585 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	YEL057C	P39983	233 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	MET18	P40469	1032 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	NBP1	P52919	319 aa	Predicted RBP	4.52	□□□□□ -1.69
PTC1	YDL006W	YGR126W	P53274	230 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	JJJ1	P53863	590 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	ESBP6	P53918	673 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	BET4	Q00618	327 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	YPL068C	Q02749	293 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	EKI1	Q03764	534 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	GIR2	Q03768	265 aa	Predicted RBP	4.52	□□□□□ -1.69
PTC1	YDL006W	SPC19	Q03954	165 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	CUR1	Q06469	252 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	YAP7	Q08182	245 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	YOL075C	Q08234	1294 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	RLM1	Q12224	676 aa		4.52	□□□□□ -1.69
PTC1	YDL006W	GAL80	P04387	435 aa		4.51	□□□□□ -1.69
PTC1	YDL006W	RPL42A	P0CX27	106 aa	Known RBP	4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms